PDB Chemical Component VR0

Ideal Model

Chemical Description

Name N~5~-[N-(methylcarbamoyl)carbamimidoyl]-L-ornithine
Formula C8 H17 N5 O3
Formal charge 0
Molecular weight 231.252 g/mol
Component type L-peptide linking
Nonstandard Parent Id ARG

Chemical features

Atom count 33
Chiral atom count 1
Chiral atoms CA
Observed leaving atoms H2 OXT HXT
Bond count 32
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) N~5~-[N-(methylcarbamoyl)carbamimidoyl]-L-ornithine
Systematic name (OpenEye OEToolkits) (2S)-2-azanyl-5-[[N-(methylcarbamoyl)carbamimidoyl]amino]pentanoic acid

Chemical Descriptors

Stereo SMILES (CACTVS) CNC(=O)NC(=N)NCCC[C@H](N)C(O)=O
SMILES (CACTVS) CNC(=O)NC(=N)NCCC[CH](N)C(O)=O
Stereo SMILES (OpenEye) [H]/N=C(/NCCC[C@@H](C(=O)O)N)\NC(=O)NC
InChI descriptor InChI=1S/C8H17N5O3/c1-11-8(16)13-7(10)12-4-2-3-5(9)6(14)15/h5H,2-4,9H2,1H3,(H,14,15)(H4,10,11,12,13,16)/t5-/m0/s1
InChIKey descriptor HXZSPNCUGZQZJU-YFKPBYRVSA-N

Status Information

Last modified 2023-11-03
Created 2010-11-01
Release status REL
Model PDB code 3CHE
Processing site RCSB