PDB Chemical Component VJK

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for VJK

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
F2	C6	1.258	1.399
F	C6	1.263	1.399
C6	F1	1.249	1.399
C6	C5	1.497	1.530
C17	N5	1.354	1.316
C17	C16	1.375	1.386
N5	C13	1.362	1.327
C16	C15	1.395	1.383
C13	N4	1.371	1.376
C13	C14	1.403	1.406
N4	C12	1.389	1.362
C5	N	1.464	1.465
C15	C14	1.394	1.394
C14	C11	1.485	1.471
C12	C11	1.373	1.358
C11	C10	1.468	1.479
N	C4	1.331	1.348
C10	N2	1.498	1.328
C10	N3	1.340	1.328
O	C4	1.236	1.213
N2	C9	1.332	1.324
C	C1	1.527	1.530
N3	C7	1.343	1.329
C4	C2	1.543	1.508
C9	C8	1.386	1.381
C7	C8	1.416	1.397
C7	N1	1.406	1.386
C1	C2	1.538	1.530
C2	N1	1.471	1.465
C2	C3	1.517	1.530
C1	H1	1.099	1.090
C1	H2	1.100	1.090
C3	H3	1.100	1.091
C3	H4	1.100	1.090
C3	H5	1.099	1.090
C5	H6	1.101	1.090
C5	H7	1.100	1.090
C8	H8	1.080	1.080
C9	H9	1.080	1.080
C12	H10	1.080	1.081
N	H11	1.000	0.970
C	H12	1.101	1.090
C	H13	1.100	1.090
C	H14	1.100	1.090
N1	H15	1.000	0.970
C15	H16	1.080	1.080
C16	H17	1.081	1.080
C17	H18	1.080	1.081
N4	H19	1.000	0.970

Bond Angles for VJK

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
F2	C6	F1	106.9	109.5
F	C6	F1	105.0	109.5
C6	C5	N	133.5	109.5
C6	C5	H6	103.2	109.5
C6	C5	H7	103.2	109.5
N5	C17	H18	118.1	119.2
C17	C16	H17	120.4	120.3
N5	C13	N4	125.8	133.0
C16	C15	H16	120.1	120.9
C14	C13	N4	108.8	107.2
C13	N4	H19	125.5	124.8
N4	C12	H10	124.9	125.2
N	C5	H6	103.2	109.4
N	C5	H7	103.2	109.4
C5	N	H11	116.7	120.0
C11	C10	N2	118.1	119.2
C11	C10	N3	116.1	119.2
N3	C10	N2	125.8	121.6
N2	C9	H9	117.9	120.3
C	C1	H1	107.6	109.5
C	C1	H2	107.6	109.5
C4	C2	N1	109.3	109.4
C9	C8	H8	121.0	120.7
C8	C7	N1	117.5	120.5
C7	C8	H8	121.0	120.7
C2	N1	C7	140.2	119.9
C7	N1	H15	101.3	120.0
C1	C2	N1	108.5	109.5
C1	C2	C3	111.0	109.5
C2	C1	H1	107.6	109.4
C2	C1	H2	107.6	109.5
C3	C2	N1	109.5	109.5
C2	N1	H15	101.3	120.1
C2	C3	H3	109.5	109.5
C2	C3	H4	109.5	109.5
C2	C3	H5	109.5	109.5
H1	C1	H2	109.4	109.5
H3	C3	H4	109.5	109.5
H3	C3	H5	109.4	109.5
H4	C3	H5	109.4	109.5
H6	C5	H7	109.5	109.5
H12	C	H13	109.5	109.4
H12	C	H14	109.5	109.4
H13	C	H14	109.5	109.5

Torsion Angles for VJK

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
F	C6	F2	F1	248.3	120.0
F2	C6	C5	N	171.8	180.0
F2	C6	C5	H6	294.8	299.9
F2	C6	C5	H7	48.8	60.0
F2	C6	F	F1	113.0	240.0
F	C6	C5	N	51.9	300.0
F	C6	C5	H6	174.9	60.0
F	C6	C5	H7	288.9	180.0
F1	C6	C5	N	292.3	60.0
F1	C6	C5	H6	55.3	180.0
F1	C6	C5	H7	169.3	300.1
N	C5	C6	H6	237.0	240.0
N	C5	C6	H7	123.0	120.0
C6	C5	N	H11	197.8	0.1
H6	C5	C6	H7	246.0	239.9
N5	C17	C16	H17	181.2	180.2
C17	N5	C13	N4	187.4	180.1
C17	C16	C15	H16	180.4	180.0
C14	C13	N5	N4	172.6	180.1
N5	C13	N4	H19	350.7	0.0
C13	N4	C12	H10	180.5	179.8
N5	C13	C14	N4	186.3	180.0
C14	C13	N4	H19	177.1	180.0
C6	C5	N	H6	123.0	120.0
C6	C5	N	H7	237.0	240.0
H6	C5	N	H7	114.0	120.0
C15	C14	C13	N4	175.1	180.0
C12	C11	C10	N2	3.7	180.0
C12	C11	C10	N3	181.1	0.8
N3	C10	C11	N2	177.4	180.8
N	C4	C2	N1	4.2	325.1
C11	C10	N2	N3	177.1	180.8
C10	N2	C9	H9	181.4	180.5
C11	C10	N3	N2	182.8	179.2
O	C4	C2	N1	180.6	145.0
N2	C9	C8	H8	178.5	180.0
C	C1	C2	N1	221.7	305.2
C2	C1	C	H1	238.9	119.9
C2	C1	C	H2	121.1	240.0
H1	C1	C	H2	242.1	120.1
N3	C7	C8	H8	179.6	179.7
N3	C7	N1	H15	108.1	354.4
C4	C2	N1	C7	269.3	184.1
C1	C2	C4	N1	240.3	240.0
C4	C2	C1	H1	220.8	185.1
C4	C2	C1	H2	102.9	305.1
C3	C2	C4	N1	118.8	120.0
C4	C2	N1	H15	145.7	4.1
C4	C2	C3	H3	180.0	189.6
C4	C2	C3	H4	300.0	309.6
C4	C2	C3	H5	60.0	69.6
C9	C8	C7	N1	172.8	180.0
C7	C8	C9	H8	180.0	180.0
C9	C8	C7	H8	180.0	180.0
C2	N1	C7	C8	171.0	354.0
C8	C7	N1	H15	294.6	174.0
N1	C7	C8	H8	352.8	0.1
C1	C2	N1	C7	30.4	304.1
C3	C2	N1	C7	151.7	64.2
C2	N1	C7	H15	236.4	179.9
C	C1	C2	H1	121.1	240.0
C	C1	C2	H2	238.9	120.0
C4	C2	C1	N1	120.1	120.0
C3	C2	C1	N1	239.6	240.0
C1	C2	N1	H15	266.8	124.1
C1	C2	C3	H3	58.4	69.6
C1	C2	C3	H4	178.5	189.6
C1	C2	C3	H5	298.4	309.6
H1	C1	C2	H2	117.9	240.0
C8	C7	N1	C2	171.0	354.0
C7	N1	C2	H15	123.6	180.1
C1	C2	N1	C3	238.7	240.0
N1	C2	C1	H1	100.6	65.1
N1	C2	C1	H2	342.8	185.2
N1	C2	C3	H3	298.6	309.5
N1	C2	C3	H4	58.7	69.5
N1	C2	C3	H5	178.6	189.5
C4	C2	C3	N1	241.3	240.1
C1	C2	C3	N1	119.8	120.1
C3	C2	C1	H1	340.3	305.1
C3	C2	C1	H2	222.4	65.1
C3	C2	N1	H15	28.1	244.1
H3	C3	C2	H4	240.0	240.0
H3	C3	C2	H5	120.0	120.0
H4	C3	C2	H5	240.0	240.0
C	C1	H1	H2	116.7	239.9
H1	C1	C2	N1	100.6	65.1
H1	C1	C2	C3	340.3	305.1
C2	C1	H1	H2	243.3	120.0
C	C1	H2	H1	243.3	120.1
H2	C1	C2	N1	342.8	185.2
H2	C1	C2	C3	222.4	65.1
C2	C1	H2	H1	116.7	240.0
H3	C3	C2	N1	298.6	309.5
C2	C3	H3	H4	120.0	120.0
C2	C3	H3	H5	240.0	240.0
H4	C3	H3	H5	119.9	120.0
H4	C3	C2	N1	58.7	69.5
C2	C3	H4	H3	240.0	240.0
C2	C3	H4	H5	120.0	120.0
H3	C3	H4	H5	240.0	240.0
H5	C3	C2	N1	178.6	189.5
C2	C3	H5	H3	120.0	120.0
C2	C3	H5	H4	240.0	240.0
H3	C3	H5	H4	120.0	120.0
C6	C5	H6	N	218.7	240.0
C6	C5	H6	H7	109.3	120.1
N	C5	H6	H7	250.7	240.1
H6	C5	N	H11	74.8	240.1
C6	C5	H7	N	141.3	120.0
C6	C5	H7	H6	250.6	239.9
N	C5	H7	H6	109.3	119.9
H7	C5	N	H11	320.8	120.1
H8	C8	C7	N1	352.8	0.1
H9	C9	C8	H8	358.5	0.0
H11	N	C5	H6	74.8	240.1
H11	N	C5	H7	320.8	120.1
H12	C	C1	H1	301.1	60.0
H12	C	C1	H2	58.9	300.0
H13	C	H12	H14	120.0	120.0
H13	C	C1	H1	61.1	180.0
H13	C	C1	H2	178.9	60.0
H12	C	H13	H14	240.0	240.1
H14	C	C1	H1	181.1	300.1
H14	C	C1	H2	298.9	180.0
H12	C	H14	H13	120.0	119.9
C2	N1	H15	C7	147.1	180.1
H17	C16	C15	H16	0.4	359.9
H18	C17	C16	H17	1.2	0.1
H19	N4	C12	H10	0.6	359.9