PDB Chemical Component VGL

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for VGL

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.535 1.480
C1 C6 1.402 1.395
C1 N2 1.336 1.330
C3 C4 1.388 1.388
C3 N2 1.319 1.318
C4 N5 1.323 1.322
C2 O1 1.261 1.214
C2 O2 1.273 1.347
C6 N5 1.334 1.320
C6 H6 1.080 1.080
C3 H3 1.080 1.080
C4 H4 1.080 1.080
O2 H2 0.950 0.967

Bond Angles for VGL

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 121.9 120.1
C2 C1 N2 118.5 120.1
C1 C2 O1 115.3 120.0
C1 C2 O2 120.3 120.0
C6 C1 N2 119.5 119.8
C1 C6 N5 121.1 119.9
C1 C6 H6 119.4 120.1
C1 N2 C3 118.9 119.9
C4 C3 N2 121.4 120.1
C3 C4 N5 120.6 120.2
C4 C3 H3 119.3 119.9
C3 C4 H4 119.7 119.9
N2 C3 H3 119.3 120.0
C4 N5 C6 118.4 120.1
N5 C4 H4 119.7 119.9
O1 C2 O2 124.2 120.0
C2 O2 H2 109.5 117.0
N5 C6 H6 119.4 120.0

Torsion Angles for VGL

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 C1 C2 N2 177.2 180.2
C2 C1 C6 N5 181.4 180.0
C2 C1 C6 H6 1.4 0.0
C2 C1 N2 C3 178.5 180.0
O1 C2 C1 O2 184.4 180.1
C1 C2 O2 H2 184.8 180.0
C2 C1 C6 N2 182.8 179.8
C6 C1 C2 O1 33.7 0.0
C6 C1 C2 O2 209.3 179.9
C6 C1 N2 C3 1.2 359.8
C4 N5 C6 C1 1.1 0.1
N5 C6 C1 H6 180.0 179.9
C2 C1 N2 C6 177.3 180.2
N2 C1 C2 O1 216.4 179.8
N2 C1 C2 O2 32.0 359.7
N2 C1 C6 N5 358.6 0.2
N2 C1 C6 H6 178.6 180.3
C4 C3 N2 C1 359.2 360.0
C1 N2 C3 H3 179.2 180.3
C1 N2 C3 C4 359.2 360.0
N2 C3 C4 H3 180.0 180.3
C3 C4 N5 C6 359.3 359.7
N5 C4 C3 H4 180.0 180.2
N2 C3 C4 N5 0.5 0.3
C4 C3 N2 H3 180.0 179.7
N2 C3 C4 H4 180.5 180.1
C1 C6 N5 C4 1.1 0.1
N5 C4 C3 N2 0.5 0.3
N5 C4 C3 H3 180.5 180.0
C3 C4 N5 H4 180.0 179.8
C4 N5 C6 H6 181.1 180.0
O1 C2 C1 C6 33.7 0.0
O1 C2 C1 N2 216.4 179.8
C1 C2 O1 O2 175.4 179.9
O1 C2 O2 H2 0.0 359.9
O2 C2 C1 C6 209.3 179.9
O2 C2 C1 N2 32.0 359.7
C1 C2 O2 O1 184.8 180.1
N5 C6 C1 N2 358.6 0.2
C1 C6 N5 H6 180.0 180.1
C6 N5 C4 H4 179.3 179.9
H6 C6 C1 N2 178.6 180.3
C1 C6 H6 N5 180.0 179.9
C4 C3 H3 N2 180.0 180.3
H3 C3 C4 N5 180.5 180.0
H3 C3 C4 H4 0.5 359.7
H4 C4 C3 N2 180.5 180.1
C3 C4 H4 N5 180.0 180.2
H4 C4 C3 H3 0.5 359.7
H4 C4 N5 C6 179.3 179.9