PDB Chemical Component VGI

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for VGI

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C14	C15	1.390	1.382
C14	C13	1.388	1.389
C15	BR1	1.929	1.891
C15	C16	1.399	1.383
C16	C17	1.392	1.382
C17	C18	1.397	1.382
C18	C13	1.389	1.389
C13	N2	1.399	1.402
N2	C9	1.403	1.347
N2	C12	1.424	1.346
C9	O1	1.230	1.216
C9	C3	1.389	1.465
C12	O2	1.237	1.216
C12	C8	1.399	1.470
C8	C10	1.390	1.388
C8	C2	1.398	1.414
C10	C11	1.393	1.388
C11	C7	1.399	1.377
C7	C1	1.393	1.403
C1	C2	1.386	1.409
C1	C6	1.392	1.415
C2	C3	1.397	1.415
C3	C4	1.389	1.392
C4	C5	1.385	1.383
C5	C6	1.390	1.388
C6	N1	1.325	1.382
N1	C19	1.459	1.465
C19	C20	1.529	1.530
C20	O3	1.427	1.429
C14	H14	1.080	1.080
C16	H16	1.080	1.080
C17	H17	1.080	1.080
C18	H18	1.081	1.080
C10	H10	1.080	1.080
C11	H11	1.080	1.080
C7	H7	1.080	1.080
C4	H4	1.080	1.080
C5	H5	1.080	1.080
N1	H1	1.000	0.970
C19	H191	1.100	1.090
C19	H192	1.100	1.090
C20	H201	1.100	1.090
C20	H202	1.099	1.090
O3	H3	0.950	0.967

Bond Angles for VGI

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C15	C14	C13	121.7	119.9
C14	C15	BR1	119.3	120.0
C14	C15	C16	118.3	120.1
C15	C14	H14	119.1	120.1
C14	C13	C18	119.8	119.9
C14	C13	N2	116.8	120.0
C13	C14	H14	119.1	120.0
BR1	C15	C16	122.4	120.0
C15	C16	C17	120.2	120.2
C15	C16	H16	119.9	120.0
C16	C17	C18	120.7	120.1
C17	C16	H16	119.9	119.9
C16	C17	H17	119.6	120.0
C17	C18	C13	119.1	119.9
C18	C17	H17	119.6	119.9
C17	C18	H18	120.4	120.0
C18	C13	N2	123.4	120.1
C13	C18	H18	120.4	120.0
C13	N2	C9	116.6	118.8
C13	N2	C12	123.8	118.8
C9	N2	C12	119.5	122.5
N2	C9	O1	119.6	119.8
N2	C9	C3	120.5	120.4
N2	C12	O2	120.9	119.9
N2	C12	C8	119.2	120.3
O1	C9	C3	119.9	119.8
C9	C3	C2	120.1	118.8
C9	C3	C4	119.3	122.0
O2	C12	C8	119.9	119.8
C12	C8	C10	120.1	122.1
C12	C8	C2	120.4	118.7
C10	C8	C2	119.5	119.2
C8	C10	C11	120.6	120.1
C8	C10	H10	119.7	119.9
C8	C2	C1	120.4	120.3
C8	C2	C3	120.3	119.3
C10	C11	C7	119.5	121.4
C11	C10	H10	119.7	119.9
C10	C11	H11	120.2	119.3
C11	C7	C1	120.1	120.0
C7	C11	H11	120.3	119.3
C11	C7	H7	119.9	120.1
C7	C1	C2	119.9	119.0
C7	C1	C6	120.2	122.0
C1	C7	H7	119.9	120.0
C2	C1	C6	119.9	118.9
C1	C2	C3	119.4	120.4
C1	C6	C5	120.6	119.7
C1	C6	N1	120.5	120.2
C2	C3	C4	120.6	119.3
C3	C4	C5	119.9	120.4
C3	C4	H4	120.1	119.8
C4	C5	C6	119.7	121.3
C5	C4	H4	120.1	119.8
C4	C5	H5	120.2	119.4
C5	C6	N1	118.9	120.1
C6	C5	H5	120.1	119.3
C6	N1	C19	121.5	120.0
C6	N1	H1	105.6	120.0
N1	C19	C20	107.7	109.5
C19	N1	H1	105.6	120.0
N1	C19	H191	110.1	109.5
N1	C19	H192	110.5	109.5
C19	C20	O3	109.2	109.5
C20	C19	H191	110.1	109.5
C20	C19	H192	110.4	109.5
C19	C20	H201	109.5	109.5
C19	C20	H202	109.6	109.5
O3	C20	H201	109.5	109.5
O3	C20	H202	109.6	109.5
C20	O3	H3	109.5	113.9
H191	C19	H192	108.1	109.4
H201	C20	H202	109.3	109.5

Torsion Angles for VGI

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C15	C14	C13	C18	1.0	360.0
C15	C14	C13	N2	178.3	180.0
C13	C14	C15	H14	180.0	180.2
BR1	C15	C14	C16	179.6	180.0
C14	C15	C16	C17	359.4	0.1
C14	C15	C16	H16	179.4	180.1
C13	C14	C15	BR1	179.4	180.0
C13	C14	C15	C16	359.8	359.9
C15	C14	C13	H14	180.0	179.8
C17	C18	C13	C14	358.9	0.1
C18	C13	C14	N2	182.7	180.0
C14	C13	C18	H18	178.9	180.0
C14	C13	N2	C9	261.7	90.1
C14	C13	N2	C12	77.5	269.9
BR1	C15	C14	C13	179.4	180.0
C14	C15	BR1	C16	180.4	180.0
BR1	C15	C14	H14	359.4	359.8
BR1	C15	C16	C17	179.9	180.0
BR1	C15	C16	H16	359.9	0.0
C16	C15	C14	C13	359.8	359.9
C14	C15	C16	BR1	179.6	180.0
C16	C15	C14	H14	179.8	179.7
C15	C16	C17	C18	0.5	360.0
C17	C16	C15	H16	180.0	180.0
C15	C16	C17	H17	180.5	180.0
C15	C16	C17	H16	180.0	180.0
C16	C17	C18	C13	0.3	359.9
C18	C17	C16	H17	180.0	180.0
C16	C17	C18	H18	180.3	180.0
C14	C13	C18	C17	358.9	0.1
C18	C17	C16	H16	180.5	180.0
C16	C17	C18	H17	180.0	180.0
C17	C18	C13	N2	181.8	180.0
C13	C18	C17	H18	180.0	179.9
C14	C13	C18	N2	177.1	180.0
C18	C13	C14	H14	181.0	180.2
C13	C18	C17	H17	180.3	180.0
C17	C18	C13	H18	180.0	180.1
C18	C13	N2	C9	78.9	270.1
C18	C13	N2	C12	254.7	89.9
C14	C13	N2	C18	182.8	180.0
N2	C13	C14	H14	358.3	0.2
N2	C13	C18	H18	1.8	360.0
C9	N2	C13	C12	184.1	180.2
C13	N2	C9	O1	356.7	0.1
C13	N2	C9	C3	177.9	180.0
C13	N2	C12	O2	2.9	0.0
C13	N2	C12	C8	182.0	180.0
C13	N2	C9	C12	176.0	179.8
C9	N2	C12	O2	178.6	179.8
C9	N2	C12	C8	357.7	359.8
O1	C9	N2	C3	178.9	180.1
N2	C9	C3	C2	359.7	0.0
N2	C9	C3	C4	178.3	180.0
C13	N2	C12	C9	184.3	180.2
C12	N2	C9	O1	180.7	180.3
C12	N2	C9	C3	1.8	0.2
O2	C12	N2	C8	180.9	180.0
N2	C12	C8	C10	180.6	180.0
N2	C12	C8	C2	1.2	360.0
O1	C9	N2	C12	180.7	180.3
N2	C9	O1	C3	181.1	179.9
O1	C9	C3	C2	180.9	179.9
O1	C9	C3	C4	359.4	359.9
C3	C9	N2	C12	1.8	0.2
N2	C9	C3	O1	178.9	180.1
C8	C2	C3	C9	359.2	359.7
C1	C2	C3	C9	179.7	180.0
C2	C3	C9	C4	181.4	180.0
C9	C3	C4	C5	180.0	180.0
C9	C3	C4	H4	360.0	360.0
N2	C12	O2	C8	179.1	180.0
O2	C12	C8	C10	359.7	360.0
O2	C12	C8	C2	180.3	180.0
N2	C12	C8	O2	180.9	180.0
C10	C8	C12	C2	179.4	180.0
C12	C8	C10	C11	180.3	180.0
C12	C8	C10	H10	0.3	0.0
C12	C8	C2	C1	179.9	180.0
C12	C8	C2	C3	0.4	0.3
C12	C8	C10	C2	180.6	180.0
C10	C8	C2	C1	0.5	360.0
C10	C8	C2	C3	181.0	180.3
C8	C10	C11	C7	359.8	0.0
C11	C10	C8	H10	180.0	180.0
C8	C10	C11	H11	179.8	179.9
C9	C3	C2	C8	359.2	359.7
C12	C8	C2	C10	179.4	180.0
C2	C8	C10	C11	359.7	0.0
C2	C8	C10	H10	179.7	180.0
C7	C1	C2	C8	360.0	0.0
C8	C2	C1	C6	180.2	180.0
C1	C2	C8	C3	179.5	179.7
C8	C2	C3	C4	180.6	179.8
C11	C10	C8	C2	359.7	0.0
C8	C10	C11	H10	180.0	180.0
C10	C11	C7	C1	0.7	360.0
C7	C11	C10	H11	180.0	180.1
C10	C11	C7	H7	180.7	180.0
C7	C11	C10	H10	179.7	180.0
C10	C11	C7	H11	180.0	179.9
C11	C7	C1	C2	359.4	0.0
C11	C7	C1	C6	179.3	180.0
C1	C7	C11	H7	180.0	180.0
C8	C2	C1	C7	360.0	0.0
C1	C7	C11	H11	180.7	180.1
C11	C7	C1	H7	180.0	180.0
C2	C1	C7	C6	180.2	180.0
C7	C1	C2	C3	179.5	179.7
C7	C1	C6	C5	180.1	180.5
C7	C1	C6	N1	0.6	0.0
C9	C3	C2	C1	179.7	180.0
C8	C2	C1	C3	180.5	180.3
C7	C1	C2	C6	179.8	180.0
C2	C1	C7	H7	179.4	180.0
C2	C1	C6	C5	359.9	0.5
C2	C1	C6	N1	180.4	180.0
C1	C2	C3	C4	1.1	0.0
C7	C1	C6	C2	180.2	180.0
C6	C1	C7	H7	359.3	360.0
C6	C1	C2	C3	359.6	359.7
C4	C5	C6	C1	359.7	359.6
C5	C6	C1	N1	179.5	180.5
C1	C6	C5	H5	179.7	179.8
C1	C6	N1	C19	270.6	180.0
C1	C6	N1	H1	30.6	360.0
C9	C3	C2	C4	178.6	180.0
C8	C2	C3	C1	179.5	179.7
C3	C2	C1	C6	359.6	359.7
C2	C3	C4	C5	358.6	0.0
C2	C3	C4	H4	178.5	180.0
C9	C3	C4	C2	181.4	180.0
C3	C4	C5	C6	1.0	0.2
C5	C4	C3	H4	180.0	180.0
C3	C4	C5	H5	181.0	180.0
C1	C6	C5	C4	359.7	359.6
C3	C4	C5	H4	180.0	180.0
C4	C5	C6	N1	179.3	180.0
C6	C5	C4	H5	180.0	180.2
C1	C6	C5	N1	180.5	179.5
C6	C5	C4	H4	181.0	180.3
C4	C5	C6	H5	180.0	179.8
C5	C6	N1	C19	91.1	359.5
C5	C6	N1	H1	211.1	179.5
C1	C6	N1	C5	179.5	180.5
N1	C6	C5	H5	359.3	0.3
C6	N1	C19	C20	241.1	180.0
C19	N1	C6	H1	240.0	180.0
C6	N1	C19	H191	1.1	300.0
C6	N1	C19	H192	120.5	59.9
C6	N1	C19	H1	120.0	180.0
N1	C19	C20	O3	210.3	65.0
C20	C19	N1	H191	240.0	240.0
C20	C19	N1	H192	120.7	120.1
N1	C19	C20	H201	330.3	185.0
N1	C19	C20	H202	90.2	305.0
H191	C19	N1	H192	240.7	240.1
C20	C19	N1	H1	121.2	0.0
N1	C19	C20	H191	120.0	120.0
N1	C19	C20	H192	239.3	240.0
O3	C20	C19	H201	240.0	240.0
O3	C20	C19	H202	120.1	120.0
C19	C20	O3	H3	202.8	180.0
H191	C19	C20	H192	119.3	120.0
H201	C20	C19	H202	240.1	240.0
O3	C20	C19	H191	90.3	305.0
O3	C20	C19	H192	331.0	185.0
C19	C20	O3	H201	120.0	120.0
C19	C20	O3	H202	239.9	240.0
H201	C20	O3	H202	119.9	120.1
C15	C14	H14	C13	180.0	180.2
H14	C14	C15	BR1	359.4	359.8
H14	C14	C15	C16	179.8	179.7
H14	C14	C13	C18	181.0	180.2
H14	C14	C13	N2	358.3	0.2
C15	C16	H16	C17	180.0	180.0
H16	C16	C17	C18	180.5	180.0
H16	C16	C17	H17	0.5	360.0
C16	C17	H17	C18	180.0	180.0
H17	C17	C16	H16	0.5	360.0
H17	C17	C18	C13	180.3	180.0
H17	C17	C18	H18	0.3	0.0
C17	C18	H18	C13	180.0	179.9
H18	C18	C17	H17	0.3	0.0
H18	C18	C13	N2	1.8	360.0
H10	C10	C8	C2	179.7	180.0
C8	C10	H10	C11	180.0	180.0
H10	C10	C11	C7	179.7	180.0
H10	C10	C11	H11	359.7	359.9
C10	C11	H11	C7	180.0	180.1
H11	C11	C10	H10	359.7	359.9
H11	C11	C7	C1	180.7	180.1
H11	C11	C7	H7	0.7	0.1
C11	C7	H7	C1	180.0	180.0
H7	C7	C11	H11	0.7	0.1
H7	C7	C1	C2	179.4	180.0
H7	C7	C1	C6	359.3	360.0
C3	C4	H4	C5	180.0	180.0
H4	C4	C5	C6	181.0	180.3
H4	C4	C5	H5	1.0	0.0
C4	C5	H5	C6	180.0	180.2
H5	C5	C4	H4	1.0	0.0
H5	C5	C6	N1	359.3	0.3
C6	N1	H1	C19	230.0	180.0
H1	N1	C19	C20	121.2	0.0
H1	N1	C19	H191	241.2	120.0
H1	N1	C19	H192	0.5	240.0
N1	C19	H191	C20	241.5	240.0
H191	C19	N1	H1	241.2	120.0
N1	C19	H191	H192	120.8	120.0
H191	C19	C20	O3	90.3	305.0
C20	C19	H191	H192	239.3	240.0
H191	C19	C20	H201	210.3	65.0
H191	C19	C20	H202	330.2	185.0
N1	C19	H192	C20	119.0	120.0
H192	C19	N1	H1	0.5	240.0
N1	C19	H192	H191	239.5	240.0
H192	C19	C20	O3	331.0	185.0
C20	C19	H192	H191	120.5	120.0
H192	C19	C20	H201	91.0	305.0
H192	C19	C20	H202	210.9	65.0
C19	C20	H201	O3	240.2	240.0
H201	C20	C19	H191	210.3	65.0
H201	C20	C19	H192	91.0	305.0
C19	C20	H201	H202	120.1	120.0
O3	C20	H201	H202	239.9	240.0
H201	C20	O3	H3	82.8	60.0
C19	C20	H202	O3	119.9	120.0
H202	C20	C19	H191	330.2	185.0
H202	C20	C19	H192	210.9	65.0
C19	C20	H202	H201	240.0	240.0
O3	C20	H202	H201	120.1	120.0
H202	C20	O3	H3	322.9	300.0
H3	O3	C20	H201	82.8	60.0
H3	O3	C20	H202	322.9	300.0