PDB Chemical Component VGF

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for VGF

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
CAN	CAS	1.393	1.383
CAN	CAQ	1.394	1.382
CAS	CLAC	1.747	1.736
CAS	CAR	1.404	1.384
CAR	CLAB	1.737	1.736
CAR	CAK	1.393	1.384
CAK	CAJ	1.405	1.382
CAJ	CAQ	1.405	1.382
CAQ	CAO	1.549	1.507
CAO	NAY	1.469	1.466
NAY	CAX	1.346	1.383
NAY	CAU	1.338	1.365
CAX	CAW	1.401	1.403
CAX	CAV	1.406	1.397
CAU	NAA	1.333	1.379
CAU	NAP	1.330	1.310
NAP	CAW	1.341	1.359
CAW	CAM	1.404	1.398
CAM	CAG	1.395	1.379
CAG	CAL	1.397	1.384
CAL	CAV	1.391	1.393
CAV	CAT	1.409	1.482
CAT	CAH	1.398	1.394
CAT	CAI	1.406	1.394
CAH	CAE	1.404	1.380
CAE	CAD	1.391	1.384
CAD	CAF	1.400	1.383
CAF	CAI	1.396	1.380
CAN	HAN	1.080	1.080
CAK	HAK	1.080	1.080
CAJ	HAJ	1.080	1.079
CAO	HAO1	1.099	1.090
CAO	HAO2	1.100	1.090
NAA	HAA1	1.000	0.970
NAA	HAA2	1.000	0.970
CAM	HAM	1.080	1.079
CAG	HAG	1.080	1.080
CAL	HAL	1.080	1.079
CAH	HAH	1.080	1.080
CAI	HAI	1.080	1.080
CAE	HAE	1.080	1.081
CAD	HAD	1.079	1.080
CAF	HAF	1.080	1.080

Bond Angles for VGF

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
CAS	CAN	CAQ	121.2	120.0
CAN	CAS	CLAC	120.6	120.0
CAN	CAS	CAR	119.4	120.0
CAS	CAN	HAN	119.4	120.0
CAN	CAQ	CAJ	118.8	120.1
CAN	CAQ	CAO	120.1	120.0
CAQ	CAN	HAN	119.4	120.0
CLAC	CAS	CAR	120.0	120.0
CAS	CAR	CLAB	119.4	120.1
CAS	CAR	CAK	120.4	120.0
CLAB	CAR	CAK	120.2	120.0
CAR	CAK	CAJ	119.5	120.0
CAR	CAK	HAK	120.3	120.0
CAK	CAJ	CAQ	120.6	120.0
CAJ	CAK	HAK	120.2	120.0
CAK	CAJ	HAJ	119.7	120.0
CAJ	CAQ	CAO	121.0	120.0
CAQ	CAJ	HAJ	119.7	120.0
CAQ	CAO	NAY	107.5	109.5
CAQ	CAO	HAO1	110.2	109.5
CAQ	CAO	HAO2	110.6	109.5
CAO	NAY	CAX	126.3	126.3
CAO	NAY	CAU	124.9	126.4
NAY	CAO	HAO1	110.2	109.4
NAY	CAO	HAO2	110.6	109.5
CAX	NAY	CAU	108.8	107.3
NAY	CAX	CAW	105.4	106.2
NAY	CAX	CAV	134.3	133.9
NAY	CAU	NAA	125.0	125.1
NAY	CAU	NAP	109.9	109.8
CAW	CAX	CAV	120.3	119.9
CAX	CAW	NAP	108.5	107.2
CAX	CAW	CAM	119.1	119.5
CAX	CAV	CAL	119.9	119.6
CAX	CAV	CAT	120.4	120.2
NAA	CAU	NAP	125.0	125.1
CAU	NAA	HAA1	109.5	120.0
CAU	NAA	HAA2	109.5	120.0
CAU	NAP	CAW	107.3	109.6
NAP	CAW	CAM	132.4	133.3
CAW	CAM	CAG	120.7	120.0
CAW	CAM	HAM	119.6	120.0
CAM	CAG	CAL	119.7	120.7
CAG	CAM	HAM	119.7	120.0
CAM	CAG	HAG	120.1	119.7
CAG	CAL	CAV	120.4	120.3
CAL	CAG	HAG	120.2	119.7
CAG	CAL	HAL	119.8	119.9
CAL	CAV	CAT	119.7	120.2
CAV	CAL	HAL	119.8	119.8
CAV	CAT	CAH	120.6	120.1
CAV	CAT	CAI	120.2	120.1
CAH	CAT	CAI	119.3	119.8
CAT	CAH	CAE	120.0	119.9
CAT	CAH	HAH	120.0	120.0
CAT	CAI	CAF	120.7	119.9
CAT	CAI	HAI	119.6	120.1
CAH	CAE	CAD	120.3	120.2
CAE	CAH	HAH	120.0	120.1
CAH	CAE	HAE	119.8	119.9
CAE	CAD	CAF	120.1	120.2
CAD	CAE	HAE	119.9	119.9
CAE	CAD	HAD	119.9	119.9
CAD	CAF	CAI	119.6	120.2
CAF	CAD	HAD	119.9	119.9
CAD	CAF	HAF	120.2	119.9
CAF	CAI	HAI	119.7	120.1
CAI	CAF	HAF	120.2	119.9
HAO1	CAO	HAO2	107.9	109.5
HAA1	NAA	HAA2	109.4	120.0

Torsion Angles for VGF

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
CAS	CAN	CAQ	CAJ	1.2	0.0
CAS	CAN	CAQ	CAO	180.3	179.9
CAQ	CAN	CAS	HAN	180.0	180.2
CLAC	CAS	CAN	CAR	180.0	180.0
CAN	CAS	CAR	CLAB	179.9	180.0
CAN	CAS	CAR	CAK	0.5	360.0
CAQ	CAN	CAS	CLAC	178.8	180.0
CAQ	CAN	CAS	CAR	358.7	360.0
CAS	CAN	CAQ	HAN	180.0	179.8
CAK	CAJ	CAQ	CAN	359.6	360.0
CAJ	CAQ	CAN	CAO	180.9	180.1
CAN	CAQ	CAJ	HAJ	179.6	180.0
CAN	CAQ	CAO	NAY	183.2	95.9
CAN	CAQ	CAO	HAO1	303.2	215.8
CAN	CAQ	CAO	HAO2	62.4	335.9
CLAC	CAS	CAN	CAQ	178.8	180.0
CAN	CAS	CLAC	CAR	180.0	180.0
CLAC	CAS	CAN	HAN	358.7	359.8
CLAC	CAS	CAR	CLAB	359.9	0.0
CLAC	CAS	CAR	CAK	180.4	180.0
CAR	CAS	CAN	CAQ	358.7	360.0
CAN	CAS	CAR	CLAC	180.0	180.0
CAR	CAS	CAN	HAN	178.7	179.8
CLAB	CAR	CAS	CAK	179.4	180.1
CAS	CAR	CAK	CAJ	0.4	0.0
CAS	CAR	CAK	HAK	180.4	180.0
CAS	CAR	CLAB	CAK	180.6	179.9
CLAB	CAR	CAK	CAJ	180.9	180.0
CLAB	CAR	CAK	HAK	0.9	359.9
CAS	CAR	CAK	CLAB	179.4	180.1
CAR	CAK	CAJ	CAQ	359.6	360.0
CAJ	CAK	CAR	HAK	180.0	180.0
CAR	CAK	CAJ	HAJ	179.6	179.9
CAN	CAQ	CAJ	CAK	359.6	360.0
CAR	CAK	CAJ	HAK	180.0	180.0
CAK	CAJ	CAQ	CAO	180.5	180.1
CAQ	CAJ	CAK	HAJ	180.0	180.1
CAN	CAQ	CAJ	CAO	179.1	179.9
CAJ	CAQ	CAN	HAN	181.3	180.3
CAQ	CAJ	CAK	HAK	179.6	180.0
CAK	CAJ	CAQ	HAJ	180.0	179.9
CAJ	CAQ	CAO	NAY	2.3	275.8
CAJ	CAQ	CAO	HAO1	122.3	35.7
CAJ	CAQ	CAO	HAO2	241.5	155.8
CAN	CAQ	CAO	CAJ	180.9	180.1
CAO	CAQ	CAN	HAN	0.4	0.2
CAO	CAQ	CAJ	HAJ	0.5	0.1
CAQ	CAO	NAY	CAX	85.7	264.7
CAQ	CAO	NAY	CAU	266.6	84.3
NAY	CAO	CAQ	HAO1	240.0	240.1
NAY	CAO	CAQ	HAO2	120.8	120.0
HAO1	CAO	CAQ	HAO2	240.8	239.9
CAQ	CAO	NAY	HAO1	120.0	120.0
CAQ	CAO	NAY	HAO2	239.2	240.0
CAX	NAY	CAO	CAU	179.1	180.3
CAO	NAY	CAX	CAW	181.9	180.0
CAO	NAY	CAX	CAV	0.2	359.9
CAO	NAY	CAU	NAA	359.3	0.0
CAO	NAY	CAU	NAP	178.8	180.0
HAO1	CAO	NAY	HAO2	119.2	120.0
CAO	NAY	CAX	CAU	180.8	179.7
CAX	NAY	CAO	HAO1	325.7	144.7
CAX	NAY	CAO	HAO2	206.5	24.6
CAX	NAY	CAU	NAA	180.1	179.7
CAX	NAY	CAU	NAP	359.6	359.8
CAW	CAX	NAY	CAV	181.7	180.0
NAY	CAX	CAW	NAP	358.6	359.8
NAY	CAX	CAW	CAM	180.2	180.0
NAY	CAX	CAV	CAL	180.9	180.1
NAY	CAX	CAV	CAT	0.5	0.0
CAO	NAY	CAU	CAX	179.2	180.3
CAU	NAY	CAO	HAO1	146.6	324.3
CAU	NAY	CAO	HAO2	27.4	204.3
CAU	NAY	CAX	CAW	1.1	0.3
CAU	NAY	CAX	CAV	179.4	180.2
NAA	CAU	NAY	NAP	180.5	180.0
NAY	CAU	NAA	HAA1	101.3	0.0
NAY	CAU	NAA	HAA2	221.3	180.0
NAY	CAU	NAP	CAW	359.4	0.1
CAW	CAX	NAY	CAU	1.1	0.3
NAY	CAX	CAW	CAV	178.6	180.0
CAW	CAX	CAV	CAL	359.0	0.0
CAW	CAX	CAV	CAT	178.6	180.0
CAU	NAP	CAW	CAX	1.2	0.1
NAP	CAW	CAX	CAM	178.4	179.8
CAX	CAW	CAM	CAG	358.4	360.0
CAX	CAW	CAM	HAM	178.4	180.0
CAV	CAX	NAY	CAU	179.4	180.2
NAY	CAX	CAV	CAW	181.9	180.0
CAV	CAX	CAW	NAP	180.0	179.8
CAV	CAX	CAW	CAM	1.6	0.0
CAG	CAL	CAV	CAX	0.3	360.0
CAL	CAV	CAX	CAT	180.5	180.0
CAX	CAV	CAL	HAL	180.3	180.0
CAX	CAV	CAT	CAH	259.9	121.1
CAX	CAV	CAT	CAI	79.6	300.9
NAY	CAU	NAA	NAP	179.4	180.0
NAA	CAU	NAP	CAW	178.9	180.2
HAA1	NAA	CAU	HAA2	240.0	180.0
NAY	CAU	NAP	NAA	180.5	180.0
CAX	CAW	NAP	CAU	1.2	0.1
NAP	CAU	NAA	HAA1	281.9	180.0
NAP	CAU	NAA	HAA2	41.9	360.0
CAU	NAP	CAW	CAM	179.3	179.8
NAP	CAW	CAX	CAV	180.0	179.8
CAX	CAW	NAP	CAM	181.9	180.2
NAP	CAW	CAM	CAG	180.5	180.2
NAP	CAW	CAM	HAM	0.5	0.2
CAM	CAW	CAX	CAV	1.6	0.0
CAX	CAW	CAM	NAP	177.9	179.8
CAW	CAM	CAG	CAL	1.0	360.0
CAG	CAM	CAW	HAM	180.0	180.0
CAW	CAM	CAG	HAG	181.0	180.0
CAW	CAM	CAG	HAM	180.0	180.0
CAM	CAG	CAL	CAV	359.7	0.0
CAL	CAG	CAM	HAG	180.0	180.0
CAM	CAG	CAL	HAL	179.7	180.0
CAX	CAV	CAL	CAG	0.3	360.0
CAL	CAG	CAM	HAM	180.9	180.0
CAM	CAG	CAL	HAG	180.0	180.0
CAG	CAL	CAV	CAT	180.8	180.0
CAV	CAL	CAG	HAL	180.0	180.1
CAX	CAV	CAL	CAT	179.5	180.0
CAV	CAL	CAG	HAG	179.7	180.0
CAG	CAL	CAV	HAL	180.0	179.9
CAL	CAV	CAT	CAH	79.5	301.1
CAL	CAV	CAT	CAI	259.2	120.9
CAX	CAV	CAT	CAL	180.5	180.0
CAT	CAV	CAL	HAL	0.8	0.0
CAH	CAT	CAV	CAI	180.3	180.2
CAV	CAT	CAH	CAE	179.7	180.0
CAV	CAT	CAH	HAH	359.8	0.0
CAV	CAT	CAI	CAF	180.4	179.7
CAV	CAT	CAI	HAI	0.5	360.0
CAV	CAT	CAH	CAI	179.7	179.8
CAH	CAT	CAI	CAF	0.1	359.4
CAH	CAT	CAI	HAI	180.2	179.7
CAT	CAH	CAE	CAD	0.1	0.0
CAE	CAH	CAT	HAH	180.0	180.0
CAT	CAH	CAE	HAE	180.1	180.0
CAV	CAT	CAI	CAH	180.3	180.2
CAI	CAT	CAH	CAE	0.0	0.2
CAI	CAT	CAH	HAH	180.1	180.2
CAD	CAF	CAI	CAT	359.6	0.6
CAF	CAI	CAT	HAI	180.0	179.7
CAT	CAI	CAF	HAF	179.6	180.3
CAE	CAH	CAT	CAI	0.0	0.2
CAT	CAH	CAE	HAH	180.0	180.0
CAH	CAE	CAD	CAF	359.6	360.0
CAD	CAE	CAH	HAE	180.0	180.1
CAH	CAE	CAD	HAD	179.6	180.0
CAD	CAE	CAH	HAH	180.0	180.0
CAH	CAE	CAD	HAE	180.0	179.9
CAE	CAD	CAF	CAI	0.6	359.7
CAF	CAD	CAE	HAD	180.0	180.0
CAE	CAD	CAF	HAF	180.5	180.0
CAT	CAI	CAF	CAD	359.6	0.6
CAF	CAD	CAE	HAE	179.6	180.0
CAE	CAD	CAF	HAD	180.0	180.0
CAD	CAF	CAI	HAI	179.5	180.3
CAI	CAF	CAD	HAF	180.0	179.7
CAT	CAI	CAF	HAI	180.0	180.3
CAI	CAF	CAD	HAD	180.6	179.7
CAD	CAF	CAI	HAF	180.0	180.3
CAS	CAN	HAN	CAQ	180.0	180.2
HAN	CAN	CAS	CLAC	358.7	359.8
HAN	CAN	CAS	CAR	178.7	179.8
HAN	CAN	CAQ	CAJ	181.3	180.3
HAN	CAN	CAQ	CAO	0.4	0.2
CAR	CAK	HAK	CAJ	180.0	180.0
HAK	CAK	CAJ	CAQ	179.6	180.0
HAK	CAK	CAJ	HAJ	359.6	360.0
CAK	CAJ	HAJ	CAQ	180.0	180.1
HAJ	CAJ	CAK	HAK	359.6	360.0
HAJ	CAJ	CAQ	CAO	0.5	0.1
CAQ	CAO	HAO1	NAY	241.6	240.0
CAQ	CAO	HAO1	HAO2	120.8	120.1
HAO1	CAO	NAY	CAX	325.7	144.7
HAO1	CAO	NAY	CAU	146.6	324.3
NAY	CAO	HAO1	HAO2	239.2	240.0
CAQ	CAO	HAO2	NAY	118.9	120.0
CAQ	CAO	HAO2	HAO1	239.5	239.9
HAO2	CAO	NAY	CAX	206.5	24.6
HAO2	CAO	NAY	CAU	27.4	204.3
NAY	CAO	HAO2	HAO1	120.6	119.9
HAA1	NAA	CAU	NAP	281.9	180.0
CAU	NAA	HAA1	HAA2	120.0	180.0
HAA2	NAA	CAU	NAP	41.9	360.0
CAU	NAA	HAA2	HAA1	239.9	180.0
CAW	CAM	HAM	CAG	180.0	180.0
HAM	CAM	CAG	CAL	180.9	180.0
HAM	CAM	CAG	HAG	0.9	0.0
CAM	CAG	HAG	CAL	180.0	180.0
HAG	CAG	CAM	HAM	0.9	0.0
HAG	CAG	CAL	CAV	179.7	180.0
HAG	CAG	CAL	HAL	359.7	360.0
CAG	CAL	HAL	CAV	180.0	180.0
HAL	CAL	CAG	HAG	359.7	360.0
HAL	CAL	CAV	CAT	0.8	0.0
HAH	CAH	CAT	CAI	180.1	180.2
CAT	CAH	HAH	CAE	180.0	180.0
HAH	CAH	CAE	CAD	180.0	180.0
HAH	CAH	CAE	HAE	0.1	360.0
CAT	CAI	HAI	CAF	180.0	179.7
HAI	CAI	CAF	HAF	359.6	360.0
CAH	CAE	HAE	CAD	180.0	180.1
HAE	CAE	CAH	HAH	0.1	360.0
HAE	CAE	CAD	CAF	179.6	180.0
HAE	CAE	CAD	HAD	359.6	0.0
CAE	CAD	HAD	CAF	180.0	180.0
HAD	CAD	CAE	HAE	359.6	0.0
HAD	CAD	CAF	CAI	180.6	179.7
HAD	CAD	CAF	HAF	0.5	0.0
CAD	CAF	HAF	CAI	180.0	179.7
HAF	CAF	CAD	HAD	0.5	0.0
HAF	CAF	CAI	HAI	359.6	360.0