PDB Chemical Component VFV
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for VFV
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
CAE |
CAH |
1.401 |
1.379 |
CAE |
CAD |
1.395 |
1.383 |
CAH |
CBH |
1.398 |
1.396 |
CAD |
CAF |
1.396 |
1.384 |
NAY |
CBL |
1.346 |
1.314 |
NAY |
NAZ |
1.342 |
1.286 |
CBH |
CBL |
1.346 |
1.478 |
CBH |
CAI |
1.401 |
1.397 |
CBL |
OBB |
1.312 |
1.348 |
CAF |
CAI |
1.397 |
1.379 |
NAZ |
CBM |
1.337 |
1.314 |
OBB |
CBM |
1.431 |
1.349 |
CBM |
CBI |
1.347 |
1.476 |
CAP |
CBI |
1.401 |
1.397 |
CAP |
CAL |
1.405 |
1.376 |
CBI |
CAQ |
1.394 |
1.399 |
CAK |
CAO |
1.390 |
1.379 |
CAK |
CBD |
1.390 |
1.386 |
CAO |
CBG |
1.394 |
1.394 |
CAL |
CBF |
1.397 |
1.397 |
FAB |
CBD |
1.380 |
1.351 |
CBD |
CAJ |
1.396 |
1.386 |
CAQ |
CAM |
1.396 |
1.376 |
CAR |
CAS |
1.399 |
1.380 |
CAR |
CBJ |
1.406 |
1.393 |
CAS |
CBK |
1.394 |
1.383 |
CBF |
CAM |
1.395 |
1.398 |
CBF |
CBC |
1.409 |
1.477 |
CBG |
CBJ |
1.398 |
1.483 |
CBG |
CAN |
1.399 |
1.394 |
NBA |
CBC |
1.362 |
1.348 |
NBA |
CBN |
1.475 |
1.465 |
CBJ |
CAV |
1.391 |
1.393 |
CAJ |
CAN |
1.396 |
1.380 |
CBK |
CBN |
1.417 |
1.507 |
CBK |
CBE |
1.396 |
1.385 |
CBC |
OAA |
1.234 |
1.216 |
CAW |
CBN |
1.550 |
1.530 |
CAW |
NBO |
1.462 |
1.465 |
CAU |
NBO |
1.330 |
1.350 |
CAU |
NAX |
1.334 |
1.305 |
CAV |
CBE |
1.394 |
1.382 |
CBE |
FAC |
1.301 |
1.351 |
NBO |
CAT |
1.332 |
1.368 |
NAX |
CAG |
1.325 |
1.342 |
CAT |
CAG |
1.330 |
1.347 |
CAO |
H1 |
1.080 |
1.080 |
CAK |
H2 |
1.080 |
1.079 |
CAJ |
H3 |
1.080 |
1.080 |
CAN |
H4 |
1.080 |
1.080 |
CAV |
H5 |
1.080 |
1.080 |
CAR |
H6 |
1.079 |
1.081 |
CAS |
H7 |
1.081 |
1.080 |
CBN |
H8 |
1.100 |
1.090 |
CAW |
H9 |
1.100 |
1.090 |
CAW |
H10 |
1.100 |
1.090 |
CAT |
H11 |
1.080 |
1.080 |
CAG |
H12 |
1.081 |
1.080 |
CAU |
H13 |
1.080 |
1.081 |
NBA |
H14 |
1.000 |
0.969 |
CAM |
H15 |
1.080 |
1.079 |
CAQ |
H16 |
1.081 |
1.080 |
CAL |
H17 |
1.080 |
1.079 |
CAP |
H18 |
1.081 |
1.080 |
CAI |
H19 |
1.080 |
1.079 |
CAF |
H20 |
1.080 |
1.081 |
CAD |
H21 |
1.080 |
1.080 |
CAE |
H22 |
1.080 |
1.080 |
CAH |
H23 |
1.080 |
1.080 |
Bond Angles for VFV
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
CAH |
CAE |
H22 |
119.7 |
120.0 |
CAE |
CAH |
H23 |
120.0 |
120.1 |
CAE |
CAD |
H21 |
119.9 |
119.9 |
CAD |
CAF |
H20 |
120.5 |
119.9 |
CBH |
CAI |
H19 |
119.2 |
120.1 |
CAF |
CAI |
H19 |
119.3 |
120.1 |
CBI |
CAP |
H18 |
119.6 |
120.0 |
CAP |
CAL |
H17 |
119.9 |
120.0 |
CBI |
CAQ |
H16 |
119.7 |
120.0 |
CAK |
CAO |
CBG |
120.4 |
120.0 |
CAK |
CAO |
H1 |
119.8 |
120.0 |
CAK |
CBD |
CAJ |
119.9 |
120.2 |
CBD |
CAK |
H2 |
119.9 |
120.0 |
CAO |
CBG |
CBJ |
118.8 |
120.1 |
CAO |
CBG |
CAN |
119.4 |
119.8 |
CBG |
CAO |
H1 |
119.8 |
120.0 |
FAB |
CBD |
CAJ |
120.8 |
119.9 |
CBD |
CAJ |
CAN |
119.8 |
120.1 |
CBD |
CAJ |
H3 |
120.1 |
119.9 |
CAQ |
CAM |
H15 |
119.4 |
120.0 |
CAR |
CAS |
CBK |
119.7 |
120.1 |
CAS |
CAR |
H6 |
119.6 |
120.0 |
CAR |
CAS |
H7 |
120.2 |
120.0 |
CAS |
CBK |
CBN |
122.0 |
119.9 |
CBK |
CAS |
H7 |
120.1 |
119.9 |
CBF |
CAM |
H15 |
119.4 |
120.1 |
CBG |
CBJ |
CAV |
121.5 |
120.1 |
CBG |
CAN |
H4 |
119.9 |
120.0 |
NBA |
CBC |
OAA |
121.3 |
120.0 |
CBC |
NBA |
H14 |
120.8 |
120.0 |
NBA |
CBN |
H8 |
108.7 |
109.5 |
CBJ |
CAV |
CBE |
119.0 |
119.9 |
CBJ |
CAV |
H5 |
120.5 |
120.1 |
CAN |
CAJ |
H3 |
120.1 |
120.0 |
CAJ |
CAN |
H4 |
119.8 |
120.1 |
CBK |
CBN |
H8 |
109.5 |
109.5 |
CAW |
CBN |
H8 |
107.8 |
109.4 |
CAW |
NBO |
CAT |
127.0 |
126.4 |
NBO |
CAW |
H9 |
107.6 |
109.5 |
NBO |
CAW |
H10 |
107.6 |
109.5 |
CAV |
CBE |
FAC |
119.2 |
120.0 |
CBE |
CAV |
H5 |
120.5 |
120.1 |
NBO |
CAT |
CAG |
107.4 |
106.8 |
NBO |
CAT |
H11 |
126.3 |
126.6 |
NAX |
CAG |
H12 |
125.9 |
126.0 |
CAG |
CAT |
H11 |
126.3 |
126.6 |
CAT |
CAG |
H12 |
126.0 |
126.0 |
H9 |
CAW |
H10 |
109.5 |
109.4 |
Torsion Angles for VFV
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
CAH |
CAE |
CAD |
H21 |
179.7 |
179.8 |
CAE |
CAD |
CAF |
H20 |
180.2 |
180.0 |
CAH |
CBH |
CAI |
H19 |
179.3 |
180.2 |
CAD |
CAF |
CAI |
H19 |
180.3 |
180.0 |
CAF |
CAI |
CBH |
H19 |
180.0 |
180.0 |
CBH |
CAI |
CAF |
H19 |
180.0 |
180.0 |
CBM |
CBI |
CAP |
H18 |
1.8 |
359.1 |
CBM |
CBI |
CAQ |
H16 |
358.2 |
0.4 |
CBI |
CAP |
CAL |
H17 |
180.5 |
179.4 |
CAP |
CBI |
CAQ |
H16 |
181.8 |
179.5 |
CBI |
CAQ |
CAM |
H15 |
179.9 |
180.0 |
CAK |
CAO |
CBG |
CBJ |
180.7 |
179.7 |
CAK |
CAO |
CBG |
CAN |
358.6 |
0.0 |
CBG |
CAO |
CAK |
H1 |
180.0 |
180.3 |
CBD |
CAK |
CAO |
CBG |
0.7 |
0.0 |
CBD |
CAK |
CAO |
H1 |
180.7 |
179.8 |
FAB |
CBD |
CAK |
CAJ |
179.5 |
180.0 |
CAK |
CBD |
CAJ |
CAN |
359.5 |
0.0 |
CAK |
CBD |
CAJ |
H3 |
179.5 |
180.0 |
CAK |
CAO |
CBG |
H1 |
180.0 |
179.7 |
CAO |
CBG |
CBJ |
CAV |
213.0 |
180.0 |
CAO |
CBG |
CAN |
H4 |
181.1 |
180.0 |
CAL |
CBF |
CAM |
H15 |
178.6 |
180.3 |
CAK |
CBD |
FAB |
CAJ |
180.5 |
180.0 |
FAB |
CBD |
CAK |
H2 |
359.8 |
0.0 |
FAB |
CBD |
CAJ |
CAN |
180.0 |
180.0 |
FAB |
CBD |
CAJ |
H3 |
360.0 |
0.0 |
CAJ |
CBD |
CAK |
H2 |
180.2 |
180.1 |
CAN |
CAJ |
CBD |
H3 |
180.0 |
180.0 |
CBD |
CAJ |
CAN |
H4 |
179.8 |
180.0 |
CBF |
CAM |
CAQ |
H15 |
180.0 |
180.0 |
CAR |
CAS |
CBK |
CBN |
181.8 |
180.0 |
CBK |
CAS |
CAR |
H7 |
180.0 |
180.0 |
CAR |
CBJ |
CAV |
H5 |
179.6 |
180.2 |
CBK |
CAS |
CAR |
H6 |
180.0 |
179.9 |
CAR |
CAS |
CBK |
H7 |
180.0 |
180.0 |
CAS |
CBK |
CBN |
H8 |
158.6 |
215.7 |
CAQ |
CAM |
CBF |
H15 |
180.0 |
180.0 |
CBF |
CBC |
NBA |
H14 |
10.1 |
0.0 |
CAO |
CBG |
CBJ |
CAN |
177.8 |
180.3 |
CBJ |
CBG |
CAO |
H1 |
0.8 |
359.9 |
CBJ |
CBG |
CAN |
H4 |
358.9 |
0.3 |
CBG |
CBJ |
CAV |
CBE |
180.8 |
180.0 |
CBG |
CBJ |
CAV |
H5 |
0.8 |
360.0 |
CAO |
CBG |
CAN |
CBJ |
182.2 |
179.7 |
CAN |
CBG |
CAO |
H1 |
178.7 |
180.3 |
CBG |
CAN |
CAJ |
H3 |
179.8 |
180.0 |
CAJ |
CAN |
CBG |
H4 |
180.0 |
180.0 |
CBC |
NBA |
CBN |
H8 |
332.3 |
32.3 |
CBK |
CBN |
NBA |
H8 |
235.0 |
240.0 |
CAW |
CBN |
NBA |
H8 |
113.7 |
120.0 |
CBJ |
CAV |
CBE |
FAC |
179.8 |
180.0 |
CBE |
CAV |
CBJ |
H5 |
180.0 |
180.1 |
CAO |
CBG |
CAN |
CAJ |
1.1 |
360.0 |
CBD |
CAJ |
CAN |
H3 |
180.0 |
180.0 |
CBG |
CAN |
CAJ |
H4 |
180.0 |
180.0 |
CBN |
CBK |
CAS |
H7 |
1.8 |
360.0 |
NBA |
CBN |
CBK |
H8 |
124.6 |
120.0 |
CAW |
CBN |
CBK |
H8 |
241.1 |
240.0 |
CBK |
CBE |
CAV |
H5 |
179.3 |
180.0 |
OAA |
CBC |
NBA |
H14 |
179.4 |
180.0 |
NBA |
CBN |
CAW |
H8 |
245.6 |
240.0 |
CBK |
CBN |
CAW |
H8 |
119.9 |
120.0 |
NBO |
CAW |
CBN |
H8 |
302.4 |
55.0 |
CAW |
NBO |
CAT |
CAG |
178.5 |
180.0 |
CAW |
NBO |
CAT |
H11 |
358.5 |
359.9 |
H9 |
CAW |
NBO |
H10 |
117.9 |
119.9 |
CAU |
NBO |
CAW |
H9 |
130.1 |
149.7 |
CAU |
NBO |
CAW |
H10 |
12.2 |
29.7 |
CAU |
NBO |
CAT |
H11 |
180.7 |
180.2 |
CAU |
NAX |
CAG |
H12 |
180.6 |
179.7 |
CBJ |
CAV |
CBE |
H5 |
180.0 |
179.9 |
FAC |
CBE |
CAV |
H5 |
359.8 |
0.0 |
CAT |
NBO |
CAW |
H9 |
312.6 |
330.0 |
CAT |
NBO |
CAW |
H10 |
194.7 |
210.0 |
CAG |
CAT |
NBO |
H11 |
180.0 |
180.1 |
NBO |
CAT |
CAG |
H12 |
179.2 |
180.0 |
NAX |
CAG |
CAT |
H11 |
179.2 |
180.0 |
CAT |
CAG |
NAX |
H12 |
180.0 |
180.0 |
NBO |
CAT |
CAG |
H11 |
180.0 |
179.9 |
NAX |
CAG |
CAT |
H12 |
180.0 |
180.0 |
CAK |
CAO |
H1 |
CBG |
180.0 |
180.3 |
H1 |
CAO |
CBG |
CBJ |
0.8 |
359.9 |
H1 |
CAO |
CBG |
CAN |
178.7 |
180.3 |
H2 |
CAK |
CAO |
CBG |
180.7 |
179.9 |
H2 |
CAK |
CAO |
H1 |
0.7 |
359.7 |
H2 |
CAK |
CBD |
CAJ |
180.2 |
180.1 |
CBD |
CAJ |
H3 |
CAN |
180.0 |
180.0 |
H3 |
CAJ |
CAN |
H4 |
359.8 |
0.0 |
H4 |
CAN |
CAJ |
H3 |
359.8 |
0.0 |
CBJ |
CAV |
H5 |
CBE |
180.0 |
180.1 |
H5 |
CAV |
CBE |
FAC |
359.8 |
0.0 |
H6 |
CAR |
CAS |
CBK |
180.0 |
179.9 |
H6 |
CAR |
CAS |
H7 |
359.9 |
360.0 |
CAR |
CAS |
H7 |
CBK |
180.0 |
180.0 |
H7 |
CAS |
CAR |
H6 |
359.9 |
360.0 |
H7 |
CAS |
CBK |
CBN |
1.8 |
360.0 |
H9 |
CAW |
CBN |
H8 |
63.4 |
175.1 |
H9 |
CAW |
NBO |
CAT |
312.6 |
330.0 |
NBO |
CAW |
H9 |
H10 |
243.4 |
240.0 |
H10 |
CAW |
CBN |
H8 |
181.3 |
295.0 |
H10 |
CAW |
NBO |
CAT |
194.7 |
210.0 |
NBO |
CAW |
H10 |
H9 |
116.6 |
120.0 |
NBO |
CAT |
H11 |
CAG |
180.0 |
180.1 |
H11 |
CAT |
CAG |
H12 |
359.2 |
0.0 |
H12 |
CAG |
CAT |
H11 |
359.2 |
0.0 |
H14 |
NBA |
CBC |
OAA |
179.4 |
180.0 |
H14 |
NBA |
CBN |
H8 |
152.2 |
212.3 |
H16 |
CAQ |
CAM |
H15 |
359.9 |
359.9 |
H18 |
CAP |
CAL |
H17 |
0.4 |
0.3 |
H20 |
CAF |
CAI |
H19 |
0.3 |
0.0 |
H21 |
CAD |
CAF |
H20 |
0.2 |
0.0 |
H22 |
CAE |
CAH |
H23 |
359.9 |
359.6 |
H22 |
CAE |
CAD |
H21 |
359.7 |
0.2 |
H23 |
CAH |
CAE |
H22 |
359.9 |
359.6 |