PDB Chemical Component VF1

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for VF1

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
CAA OAT 1.433 1.429
OAT CBE 1.453 1.428
CAJ CAH 1.390 1.382
CAJ CAV 1.392 1.383
CAC CBC 1.539 1.530
CBE CAF 1.514 1.503
CBE CBC 1.519 1.550
CBE CBA 1.550 1.549
CAH CAG 1.390 1.383
CAY CBC 1.525 1.581
CAY CAV 1.546 1.507
CAY NAS 1.482 1.477
CAF CAE 1.506 1.331
CBC CAR 1.564 1.540
CAV CAK 1.391 1.383
NAS CBA 1.490 1.489
CBA CBF 1.544 1.531
OAD CAU 1.363 1.359
CAG CAI 1.391 1.382
CAN CAU 1.389 1.385
CAN CAX 1.392 1.385
CAE CBD 1.546 1.534
CAU CAL 1.387 1.388
CAK CAI 1.390 1.382
CAR CBD 1.523 1.526
CBF CAX 1.418 1.505
CBF CBD 1.511 1.532
CBF CAP 1.541 1.535
CAX CAW 1.407 1.379
CBD CAZ 1.520 1.519
CAL CAM 1.391 1.378
CAP CAO 1.542 1.532
CAW CAM 1.391 1.391
CAW CAQ 1.417 1.504
CAZ CAQ 1.561 1.522
CAZ NBB 1.484 1.459
CAO NBB 1.470 1.467
NBB CAB 1.473 1.469
CAP H1 1.100 1.090
CAP H2 1.100 1.090
CAO H3 1.100 1.090
CAO H4 1.100 1.091
CAB H6 1.100 1.089
CAB H7 1.100 1.090
CAB H8 1.101 1.090
CAZ H9 1.101 1.089
CAQ H10 1.100 1.090
CAQ H11 1.100 1.090
CAM H12 1.081 1.079
CAL H13 1.079 1.079
OAD H14 0.950 0.967
CAN H15 1.080 1.080
CBA H16 1.100 1.090
NAS H17 1.000 1.010
CAA H19 1.100 1.090
CAA H20 1.100 1.090
CAA H21 1.100 1.090
CAF H22 1.080 1.079
CAE H24 1.080 1.080
CAR H26 1.100 1.090
CAR H27 1.101 1.090
CAC H28 1.100 1.090
CAC H29 1.100 1.090
CAC H30 1.100 1.090
CAY H31 1.100 1.091
CAJ H32 1.080 1.081
CAH H33 1.080 1.080
CAG H34 1.080 1.079
CAI H35 1.080 1.080
CAK H36 1.080 1.080

Bond Angles for VF1

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
OAT CBE CAF 110.3 111.3
OAT CBE CBC 110.3 111.2
CAJ CAH CAG 119.8 120.0
CAH CAJ H32 119.7 120.0
CAJ CAH H33 120.1 120.0
CAJ CAV CAK 119.3 120.0
CAF CBE CBC 112.1 111.0
CBE CAF CAE 108.6 115.6
CBE CAF H22 125.7 122.2
CBE CBC CAR 110.5 109.6
CBE CBA H16 111.5 112.5
CAH CAG CAI 119.8 120.0
CAG CAH H33 120.1 120.0
CAH CAG H34 120.1 120.0
CAY CAV CAK 121.1 120.0
CAV CAY H31 107.9 109.9
CAY NAS H17 110.1 111.0
CAF CAE CBD 111.6 111.8
CAE CAF H22 125.7 122.2
CAF CAE H24 124.2 124.1
CBC CAR H26 109.8 108.9
CBC CAR H27 109.8 110.8
CAV CAK CAI 120.3 120.0
CAV CAK H36 119.9 120.0
NAS CBA H16 112.4 112.7
CBA CBF CBD 107.2 109.9
CAI CAG H34 120.1 120.1
CAG CAI H35 119.9 120.0
CAX CAN H15 119.5 119.8
CBF CBD CAE 111.5 107.3
CBD CAE H24 124.2 124.2
CAU CAL H13 119.8 120.0
CAK CAI H35 119.9 120.0
CBF CAP H1 109.1 109.7
CBF CAP H2 109.1 109.8
CBD CAZ H9 107.8 107.5
CAL CAM H12 119.9 119.7
CAP CAO NBB 109.3 109.5
CAO CAP H1 109.1 109.8
CAO CAP H2 109.1 109.8
CAP CAO H3 109.5 109.5
CAP CAO H4 109.5 109.5
CAW CAM H12 119.9 119.6
CAW CAQ H10 108.1 108.9
CAW CAQ H11 108.1 108.8
CAQ CAZ H9 107.3 108.1
CAZ CAQ H10 108.1 108.9
CAZ CAQ H11 108.2 108.8
CAO NBB CAB 111.3 111.0
NBB CAO H3 109.5 109.4
NBB CAO H4 109.5 109.5
NBB CAB H6 109.5 109.5
NBB CAB H7 109.5 109.4
NBB CAB H8 109.5 109.4
H1 CAP H2 109.5 109.7
H3 CAO H4 109.5 109.4
H6 CAB H7 109.5 109.5
H6 CAB H8 109.4 109.5
H7 CAB H8 109.5 109.5
H10 CAQ H11 109.5 108.8
H19 CAA H20 109.5 109.4
H19 CAA H21 109.5 109.5
H20 CAA H21 109.5 109.5
H26 CAR H27 109.5 109.6
H28 CAC H29 109.4 109.5
H28 CAC H30 109.5 109.5
H29 CAC H30 109.5 109.5

Torsion Angles for VF1

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
CAA OAT CBE CAF 299.9 300.7
CAA OAT CBE CBC 175.6 176.4
CAF CBE OAT CBC 124.3 124.3
OAT CBE CAF CAE 185.7 180.5
OAT CBE CAF H22 5.7 0.4
OAT CBE CBC CAR 183.6 172.9
OAT CBE CBA H16 314.8 312.0
CAH CAJ CAV CAK 359.2 0.3
CAJ CAH CAG CAI 359.9 359.9
CAG CAH CAJ H33 180.0 180.1
CAJ CAH CAG H34 179.9 179.9
CAY CAV CAJ CAK 180.6 179.7
CAJ CAV CAY H31 25.9 263.9
CAJ CAV CAK CAI 0.7 359.5
CAJ CAV CAK H36 180.7 179.7
CAC CBC CAR H26 242.2 15.1
CAC CBC CAR H27 2.6 254.5
OAT CBE CAF CBC 236.7 235.6
CAF CBE CBC CAR 60.4 48.4
CAF CBE CBA H16 79.3 76.6
CBE CAF CAE CBD 348.3 0.3
CAE CAF CBE H22 180.0 180.0
CBE CAF CAE H24 168.3 179.9
OAT CBE CBC CAF 123.2 124.5
CBC CBE CAF CAE 309.0 304.8
CBC CBE CAF H22 129.0 124.8
CBC CBE CBA H16 198.7 194.1
CBE CBC CAR H26 116.6 248.1
CBE CBC CAR H27 237.0 127.5
NAS CBA CBE H16 119.4 122.0
CBE CBA CBF CBD 343.1 351.7
CAG CAH CAJ H32 180.5 180.0
CAJ CAH CAG H33 180.0 179.9
CAI CAG CAH H34 180.0 180.0
CAH CAG CAI H35 180.1 180.0
CBC CAY NAS H17 148.2 119.8
CAY CBC CAR H26 12.2 140.2
CAY CBC CAR H27 132.6 19.6
CAJ CAV CAY CAK 179.4 180.3
CAV CAY NAS H17 271.8 239.2
CAY CAV CAK CAI 180.1 179.8
CAY CAV CAK H36 0.1 360.0
CAY NAS CBA H16 126.8 150.6
CAE CAF CBE CBC 309.0 304.8
CBE CAF CAE H22 180.0 180.0
CBF CBD CAE CAF 308.5 300.8
CBD CAE CAF H24 180.0 180.4
H26 CAR CBC H27 239.6 120.6
CAK CAV CAY H31 206.5 83.6
CAV CAK CAI H35 179.6 180.3
CBE CBA NAS H16 241.2 238.1
NAS CBA CBF CBD 93.1 102.6
CBA CBF CBD CAE 66.1 61.7
CBA CBF CAP H1 293.5 62.1
CBA CBF CAP H2 53.1 301.4
OAD CAU CAL H13 0.0 0.5
CAI CAG CAH H33 179.9 180.0
CAH CAG CAI H34 180.0 180.0
CAV CAK CAI CAG 359.6 0.4
CAK CAI CAG H35 180.0 179.8
CAN CAU CAL H13 180.1 180.5
CBD CAE CAF H22 168.3 180.4
CAF CAE CBD H24 180.0 179.6
CAE CBD CAZ H9 300.4 292.5
CAU CAL CAM H12 179.3 179.7
CAV CAK CAI H36 180.0 180.2
CAK CAI CAG H34 180.0 179.9
CAG CAI CAK H35 180.0 180.2
CBE CBC CAR CBD 356.8 7.2
CAR CBD CAE H24 247.6 239.3
CAR CBD CAZ H9 59.7 54.5
CBF CAX CAN H15 0.0 357.7
CAX CBF CAP H1 56.7 184.0
CAX CBF CAP H2 176.3 63.3
CAF CAE CBD CBF 308.5 300.8
CBF CBD CAE H24 128.5 121.2
CBD CBF CAP H1 176.9 302.3
CBD CBF CAP H2 296.4 181.6
CBF CBD CAZ H9 179.7 175.3
CAO CAP CBF H1 239.8 119.6
CAO CAP CBF H2 120.2 240.3
CBF CAP CAO H3 65.0 59.7
CBF CAP CAO H4 185.1 179.6
H1 CAP CBF H2 240.5 120.7
CAX CAW CAM H12 181.6 179.4
CAX CAW CAQ H10 116.8 228.4
CAX CAW CAQ H11 235.2 109.9
CAQ CAZ CBD H9 116.0 117.2
CBD CAZ CAQ H10 274.7 163.0
CBD CAZ CAQ H11 156.2 281.5
CAW CAM CAL H12 180.0 180.0
CBF CAP CAO H1 120.2 240.4
CBF CAP CAO H2 239.8 119.7
CAP CAO NBB CAB 180.7 183.7
NBB CAO CAP H3 240.0 240.0
NBB CAO CAP H4 120.0 120.0
H1 CAP CAO H2 119.6 239.3
H3 CAO CAP H4 239.9 240.1
CAL CAM CAW H12 180.0 180.0
CAM CAW CAQ H10 299.1 48.9
CAM CAW CAQ H11 57.5 290.5
CAW CAQ CAZ H9 151.8 159.0
CAZ CAQ CAW H10 239.2 120.9
CAZ CAQ CAW H11 120.8 239.3
H10 CAQ CAW H11 241.6 118.4
CBD CAZ CAQ H9 243.7 243.2
CAW CAQ CAZ H10 120.8 239.1
CAW CAQ CAZ H11 239.2 120.7
H10 CAQ CAZ H11 118.4 241.6
CAZ NBB CAO H3 297.6 298.3
CAZ NBB CAO H4 177.5 178.4
CAZ NBB CAB H6 180.0 182.3
CAZ NBB CAB H7 300.0 302.3
CAZ NBB CAB H8 60.0 62.3
NBB CAO CAP H1 184.8 59.3
NBB CAO CAP H2 65.3 180.0
CAP CAO NBB H3 119.9 120.1
CAP CAO NBB H4 240.0 240.0
CAO NBB CAB H6 56.3 56.0
CAO NBB CAB H7 176.3 176.0
CAO NBB CAB H8 296.3 296.0
H3 CAO NBB H4 120.1 119.9
CAB NBB CAO H3 60.7 63.6
CAB NBB CAO H4 300.6 303.7
H6 CAB NBB H7 240.0 240.0
H6 CAB NBB H8 120.0 120.0
H7 CAB NBB H8 240.0 240.0
CBF CAP H1 H2 119.3 239.3
H1 CAP CAO NBB 184.8 59.3
CAO CAP H1 H2 240.7 120.7
H1 CAP CAO H3 304.8 179.3
H1 CAP CAO H4 64.9 299.2
CBF CAP H2 H1 240.7 120.7
H2 CAP CAO NBB 65.3 180.0
CAO CAP H2 H1 119.3 239.3
H2 CAP CAO H3 185.3 300.0
H2 CAP CAO H4 305.3 59.9
CAP CAO H3 NBB 240.2 239.9
H3 CAO CAP H1 304.8 179.3
H3 CAO CAP H2 185.3 300.0
CAP CAO H3 H4 120.1 120.0
H3 CAO NBB CAB 60.7 63.6
NBB CAO H3 H4 239.9 240.0
CAP CAO H4 NBB 119.8 120.1
H4 CAO CAP H1 64.9 299.2
H4 CAO CAP H2 305.3 59.9
CAP CAO H4 H3 239.9 240.0
H4 CAO NBB CAB 300.6 303.7
NBB CAO H4 H3 120.1 119.9
NBB CAB H6 H7 120.0 120.0
NBB CAB H6 H8 240.0 240.1
H7 CAB H6 H8 120.0 120.1
NBB CAB H7 H6 239.9 240.0
NBB CAB H7 H8 120.0 119.9
H6 CAB H7 H8 240.0 239.9
NBB CAB H8 H6 120.0 120.0
NBB CAB H8 H7 240.0 240.1
H6 CAB H8 H7 120.0 120.1
H9 CAZ CAQ H10 31.0 279.8
H9 CAZ CAQ H11 272.5 38.3
CAW CAQ H10 H11 117.6 241.6
H10 CAQ CAZ H9 31.0 279.8
CAZ CAQ H10 H11 242.4 118.5
CAW CAQ H11 H10 242.4 118.5
H11 CAQ CAZ H9 272.5 38.3
CAZ CAQ H11 H10 117.6 241.5
H13 CAL CAM H12 359.3 359.7
H16 CBA CBF CBD 218.2 226.7
H17 NAS CBA H16 7.2 28.7
H20 CAA H19 H21 120.0 120.0
H19 CAA H20 H21 240.0 240.0
H19 CAA H21 H20 120.0 120.0
H22 CAF CBE CBC 129.0 124.8
CBE CAF H22 CAE 180.0 180.0
H22 CAF CAE CBD 168.3 180.4
H22 CAF CAE H24 348.3 360.0
CAF CAE H24 CBD 180.0 180.4
H24 CAE CAF H22 348.3 360.0
CBC CAR H26 H27 120.6 238.7
CBC CAR H27 H26 239.4 120.2
H29 CAC H28 H30 120.0 120.0
H28 CAC H29 H30 240.0 240.0
H28 CAC H30 H29 120.0 120.0
H31 CAY CAV CAK 206.5 83.6
H31 CAY NAS H17 34.1 0.7
H32 CAJ CAH CAG 180.5 180.0
H32 CAJ CAH H33 0.4 360.0
H32 CAJ CAV CAK 179.2 180.3
CAJ CAH H33 CAG 180.0 180.1
H33 CAH CAJ H32 0.4 360.0
H33 CAH CAG CAI 179.9 180.0
H33 CAH CAG H34 359.9 360.0
CAH CAG H34 CAI 180.0 180.0
H34 CAG CAH H33 359.9 360.0
H34 CAG CAI H35 0.0 0.0
H35 CAI CAG H34 0.0 0.0
CAV CAK H36 CAI 180.0 179.8
H36 CAK CAI H35 359.6 0.1