PDB Chemical Component VES

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for VES

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N5 C4 1.470 1.475
N5 C1 1.474 1.479
C4 C3 1.518 1.542
C3 C2 1.541 1.551
C2 C1 1.531 1.549
C4 H41C 1.100 1.090
C4 H42C 1.100 1.091
C1 H11C 1.100 1.090
C1 H12C 1.099 1.091
C3 H31C 1.100 1.090
C3 H32C 1.100 1.090
C2 H21C 1.100 1.090
C2 H22C 1.100 1.090
N5 H2 1.000 1.009

Bond Angles for VES

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C4 N5 C1 115.4 108.5
N5 C4 C3 102.8 107.3
N5 C4 H41C 111.1 109.9
N5 C4 H42C 111.1 109.9
C4 N5 H2 108.0 111.0
N5 C1 C2 98.7 104.8
N5 C1 H11C 112.1 110.4
N5 C1 H12C 112.1 110.4
C1 N5 H2 108.0 111.0
C4 C3 C2 103.1 103.0
C3 C4 H41C 111.1 109.9
C3 C4 H42C 111.1 109.9
C4 C3 H31C 111.0 110.7
C4 C3 H32C 111.0 110.7
C3 C2 C1 105.3 101.6
C2 C3 H31C 111.1 110.7
C2 C3 H32C 111.1 110.7
C3 C2 H21C 110.5 111.0
C3 C2 H22C 110.5 111.0
C2 C1 H11C 112.1 110.4
C2 C1 H12C 112.1 110.4
C1 C2 H21C 110.5 111.0
C1 C2 H22C 110.5 111.0
H41C C4 H42C 109.5 110.0
H11C C1 H12C 109.5 110.4
H31C C3 H32C 109.5 110.8
H21C C2 H22C 109.5 110.9

Torsion Angles for VES

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C4 N5 C1 C2 340.0 335.9
C4 N5 C1 H11C 98.2 94.8
C4 N5 C1 H12C 221.8 217.1
C1 N5 C4 H2 239.1 237.8
N5 C4 C3 C2 24.8 22.3
C3 C4 N5 H41C 241.1 240.5
C3 C4 N5 H42C 118.9 119.4
N5 C4 C3 H31C 143.8 140.7
N5 C4 C3 H32C 265.9 263.9
H41C C4 N5 H42C 237.8 238.9
C1 N5 C4 C3 357.0 1.0
C1 N5 C4 H41C 115.9 120.4
C1 N5 C4 H42C 238.0 241.6
C4 N5 C1 H2 120.9 122.2
C3 C2 C1 N5 34.8 37.1
C2 C1 N5 H11C 241.8 241.1
C2 C1 N5 H12C 118.2 118.8
N5 C1 C2 H21C 275.4 279.0
N5 C1 C2 H22C 154.1 155.2
H11C C1 N5 H12C 236.4 237.7
C3 C4 N5 C1 357.0 1.0
N5 C4 C3 H41C 118.9 119.4
N5 C4 C3 H42C 241.1 240.6
C3 C4 N5 H2 117.8 123.2
C4 C3 C2 C1 321.5 324.4
C2 C3 C4 H31C 241.0 241.6
C2 C3 C4 H32C 119.0 118.4
C4 C3 C2 H21C 80.8 82.4
C4 C3 C2 H22C 202.1 206.3
H41C C4 C3 H42C 122.2 121.2
H31C C3 C4 H32C 238.0 236.7
N5 C1 C2 C3 34.8 37.1
C2 C3 C4 H41C 265.9 262.8
C2 C3 C4 H42C 143.7 141.7
C4 C3 C2 H31C 119.0 118.4
C4 C3 C2 H32C 241.0 241.6
C3 C2 C1 H11C 276.5 278.2
C3 C2 C1 H12C 153.0 155.9
C1 C2 C3 H21C 240.6 241.9
C1 C2 C3 H22C 119.3 118.1
H31C C3 C2 H32C 122.1 123.2
H21C C2 C3 H22C 238.7 236.2
N5 C1 C2 H11C 118.2 118.9
N5 C1 C2 H12C 241.8 241.2
C2 C1 N5 H2 219.1 213.7
C1 C2 C3 H31C 202.5 206.0
C1 C2 C3 H32C 80.4 82.8
C3 C2 C1 H21C 119.3 118.1
C3 C2 C1 H22C 240.7 241.8
H11C C1 C2 H12C 123.6 122.3
H21C C2 C1 H22C 121.3 123.8
H41C C4 N5 C1 115.9 120.4
N5 C4 H41C C3 246.3 242.2
N5 C4 H41C H42C 123.1 121.0
H41C C4 N5 H2 236.7 242.6
H41C C4 C3 C2 265.9 262.8
C3 C4 H41C H42C 236.9 238.9
H41C C4 C3 H31C 24.9 21.2
H41C C4 C3 H32C 147.0 144.5
H42C C4 N5 C1 238.0 241.6
N5 C4 H42C C3 113.8 117.8
N5 C4 H42C H41C 236.9 239.0
H42C C4 N5 H2 358.9 3.8
H42C C4 C3 C2 143.7 141.7
C3 C4 H42C H41C 123.1 121.1
H42C C4 C3 H31C 262.7 260.1
H42C C4 C3 H32C 24.8 23.3
N5 C1 H11C C2 250.0 244.6
N5 C1 H11C H12C 125.0 122.3
H11C C1 N5 H2 337.3 332.6
C2 C1 H11C H12C 235.0 237.7
H11C C1 C2 H21C 157.2 160.1
H11C C1 C2 H22C 35.9 36.3
N5 C1 H12C C2 110.0 115.4
N5 C1 H12C H11C 235.0 237.7
H12C C1 N5 H2 100.9 94.9
C2 C1 H12C H11C 125.0 122.3
H12C C1 C2 H21C 33.7 37.8
H12C C1 C2 H22C 272.3 274.0
C4 C3 H31C C2 245.9 246.4
H31C C3 C4 H41C 24.9 21.2
H31C C3 C4 H42C 262.7 260.1
C4 C3 H31C H32C 123.0 123.2
H31C C3 C2 C1 202.5 206.0
C2 C3 H31C H32C 237.0 236.9
H31C C3 C2 H21C 321.8 324.0
H31C C3 C2 H22C 83.2 87.8
C4 C3 H32C C2 114.0 113.6
H32C C3 C4 H41C 147.0 144.5
H32C C3 C4 H42C 24.8 23.3
C4 C3 H32C H31C 237.0 236.8
H32C C3 C2 C1 80.4 82.8
C2 C3 H32C H31C 123.0 123.2
H32C C3 C2 H21C 199.8 200.8
H32C C3 C2 H22C 321.1 324.6
C3 C2 H21C C1 243.8 247.8
H21C C2 C3 H31C 321.8 324.0
H21C C2 C3 H32C 199.8 200.8
C3 C2 H21C H22C 121.9 123.9
H21C C2 C1 H11C 157.2 160.1
H21C C2 C1 H12C 33.7 37.8
C1 C2 H21C H22C 238.1 236.2
C3 C2 H22C C1 116.2 112.3
H22C C2 C3 H31C 83.2 87.8
H22C C2 C3 H32C 321.1 324.6
C3 C2 H22C H21C 238.1 236.1
H22C C2 C1 H11C 35.9 36.3
H22C C2 C1 H12C 272.3 274.0
C1 C2 H22C H21C 121.9 123.8
C4 N5 H2 C1 234.6 239.3
H2 N5 C4 C3 117.8 123.2
H2 N5 C4 H41C 236.7 242.6
H2 N5 C4 H42C 358.9 3.8
H2 N5 C1 C2 219.1 213.7
H2 N5 C1 H11C 337.3 332.6
H2 N5 C1 H12C 100.9 94.9