PDB Chemical Component VDY

Ideal Model

Chemical Description

Name 3-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANOL
Synonyms 25-HYDROXYVITAMIN D3
Formula C27 H44 O2
Formal charge 0
Molecular weight 400.637 g/mol
Component type NON-POLYMER

Chemical features

Atom count 73
Chiral atom count 5
Chiral atoms C3 C13 C14 C17 C20
Bond count 75
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) (3S,5Z,14beta,17alpha)-9,10-secocholesta-5,7,10-triene-3,25-diol
Systematic name (OpenEye OEToolkits) (1S)-3-[(2E)-2-[(1R,3aS,7aR)-1-[(2R)-6-hydroxy-6-methyl-heptan-2-yl]-7a-methyl-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]-4-methylidene-cyclohexan-1-ol

Chemical Descriptors

Stereo SMILES (CACTVS) C[C@H](CCCC(C)(C)O)[C@H]1CC[C@H]2C(/CCC[C@]12C)=C/C=C3/C[C@@H](O)CCC3=C
SMILES (CACTVS) C[CH](CCCC(C)(C)O)[CH]1CC[CH]2C(CCC[C]12C)=CC=C3C[CH](O)CCC3=C
Stereo SMILES (OpenEye) C[C@H](CCCC(C)(C)O)[C@H]1CC[C@@H]\2[C@@]1(CCC/C2=C\C=C3C[C@H](CCC3=C)O)C
InChI descriptor InChI=1S/C27H44O2/c1-19-10-13-23(28)18-22(19)12-11-21-9-7-17-27(5)24(14-15-25(21)27)20(2)8-6-16-26(3,4)29/h11-12,20,23-25,28-29H,1,6-10,13-18H2,2-5H3/b21-11+,22-12-/t20-,23+,24-,25+,27-/m1/s1
InChIKey descriptor JWUBBDSIWDLEOM-DTOXIADCSA-N

Status Information

Last modified 2021-03-01
Created 2001-05-18
Release status REL
Model PDB code 1J78
Processing site PDBJ