PDB Chemical Component VDX

Ideal Model

Chemical Description

Name 5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL
Synonyms 1,25 DIHYDROXY VITAMIN D3
Formula C27 H44 O3
Formal charge 0
Molecular weight 416.636 g/mol
Component type NON-POLYMER

Chemical features

Atom count 74
Chiral atom count 6
Chiral atoms C1 C3 C13 C14 C17 C20
Bond count 76
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) (1S,3R,5Z,7E,14beta,17alpha)-9,10-secocholesta-5,7,10-triene-1,3,25-triol
Systematic name (OpenEye OEToolkits) (1R,3S,5Z)-5-[(2E)-2-[(1R,3aS,7aR)-1-[(2R)-6-hydroxy-6-methyl-heptan-2-yl]-7a-methyl-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]-4-methylidene-cyclohexane-1,3-diol

Chemical Descriptors

Stereo SMILES (CACTVS) C[C@H](CCCC(C)(C)O)[C@H]1CC[C@H]2C(/CCC[C@]12C)=C/C=C3/C[C@@H](O)C[C@H](O)C3=C
SMILES (CACTVS) C[CH](CCCC(C)(C)O)[CH]1CC[CH]2C(CCC[C]12C)=CC=C3C[CH](O)C[CH](O)C3=C
Stereo SMILES (OpenEye) C[C@H](CCCC(C)(C)O)[C@H]1CC[C@@H]\2[C@@]1(CCC/C2=C\C=C/3\C[C@H](C[C@@H](C3=C)O)O)C
InChI descriptor InChI=1S/C27H44O3/c1-18(8-6-14-26(3,4)30)23-12-13-24-20(9-7-15-27(23,24)5)10-11-21-16-22(28)17-25(29)19(21)2/h10-11,18,22-25,28-30H,2,6-9,12-17H2,1,3-5H3/b20-10+,21-11-/t18-,22-,23-,24+,25+,27-/m1/s1
InChIKey descriptor GMRQFYUYWCNGIN-NKMMMXOESA-N

Status Information

Last modified 2021-03-13
Created 1999-11-03
Release status REL
Model PDB code 1DB1
Processing site PDBJ