PDB Chemical Component VBP

Ideal Model

Chemical Description

Name 4-({3-[(2R)-2-amino-2-carboxyethyl]-2,6-dioxo-3,6-dihydropyrimidin-1(2H)-yl}methyl)benzoic acid
Synonyms (S)-1-(2-amino-2-carboxyethyl)-3-(4-carboxybenzyl)pyrimidine-2,4-dione
Formula C15 H15 N3 O6
Formal charge 0
Molecular weight 333.296 g/mol
Component type NON-POLYMER

Chemical features

Atom count 39
Chiral atom count 1
Chiral atoms C02
Bond count 40
Aromatic bond count 6

Chemical Identifiers

Systematic name (ACDLabs) 4-({3-[(2R)-2-amino-2-carboxyethyl]-2,6-dioxo-3,6-dihydropyrimidin-1(2H)-yl}methyl)benzoic acid
Systematic name (OpenEye OEToolkits) 4-[[3-[(2R)-2-amino-3-hydroxy-3-oxo-propyl]-2,6-dioxo-pyrimidin-1-yl]methyl]benzoic acid

Chemical Descriptors

Stereo SMILES (CACTVS) N[C@H](CN1C=CC(=O)N(Cc2ccc(cc2)C(O)=O)C1=O)C(O)=O
SMILES (CACTVS) N[CH](CN1C=CC(=O)N(Cc2ccc(cc2)C(O)=O)C1=O)C(O)=O
Stereo SMILES (OpenEye) c1cc(ccc1CN2C(=O)C=CN(C2=O)C[C@H](C(=O)O)N)C(=O)O
InChI descriptor InChI=1S/C15H15N3O6/c16-11(14(22)23)8-17-6-5-12(19)18(15(17)24)7-9-1-3-10(4-2-9)13(20)21/h1-6,11H,7-8,16H2,(H,20,21)(H,22,23)/t11-/m1/s1
InChIKey descriptor XLRLZPOBHPIDFX-LLVKDONJSA-N

Status Information

Last modified 2020-06-17
Created 2009-04-09
Release status REL
Model PDB code 3H06
Processing site RCSB