Atom Nomenclature for V7O

The atom nomenclature in PDB data files was revised with the release of data in the PDB Format Version 3.0. These changes make the PDB atom names used by PDB compliant with existing IUPAC nomenclature for standard amino acid and nucleotides (Pure & Appl. Chem., 70, 117-142, 1998) with the exception of the well established convention for C-terminal atoms OXT and HXT. A small number of additional changes were introduced in Version 3 to make atom labeling more conventional. The following chemical diagrams and tables provide the correspondences between atom names used in Version 3 and Version 2 PDB formats.

Labeled Chemical Diagrams

Chemical diagram with format V3 atom labels (heavy atoms)
Chemical diagram with format V3 atom labels (all atoms)
Chemical diagram with format V2 atom labels (heavy atoms)
Chemical diagram with format V2 atom labels (all atoms)

Atom Name Correspondences for V7O

Atom Name (V3) Atom Name (V2)
V1 V1
V2 V2
V3 V3
V4 V4
V5 V5
V6 V6
V7 V7
O1 O1
O2 O2
O3 O3
O4 O4
O5 O5
O6 O6
O7 O7
O8 O8
O9 O9
O10 O10
O11 O11
O12 O12
O13 O13
O14 O14
O15 O15
O16 O16
O17 O17
O18 O18
O19 O19