PDB Chemical Component V4H
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for V4H
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C14 |
C11 |
1.526 |
1.474 |
| C12 |
C11 |
1.395 |
1.398 |
| C12 |
C13 |
1.379 |
1.377 |
| C11 |
C10 |
1.391 |
1.397 |
| C13 |
C08 |
1.393 |
1.395 |
| C10 |
C09 |
1.388 |
1.377 |
| C08 |
C09 |
1.393 |
1.396 |
| C08 |
C07 |
1.542 |
1.481 |
| O15 |
C07 |
1.179 |
1.215 |
| C07 |
N06 |
1.461 |
1.347 |
| N06 |
C16 |
1.506 |
1.470 |
| N06 |
C05 |
1.520 |
1.469 |
| C16 |
C02 |
1.521 |
1.532 |
| C05 |
C04 |
1.534 |
1.532 |
| O01 |
C02 |
1.401 |
1.429 |
| C02 |
C03 |
1.487 |
1.530 |
| C03 |
C04 |
1.482 |
1.530 |
| C02 |
H1 |
1.100 |
1.090 |
| C03 |
H2 |
1.100 |
1.091 |
| C03 |
H3 |
1.099 |
1.090 |
| C04 |
H4 |
1.100 |
1.090 |
| C04 |
H5 |
1.100 |
1.091 |
| C05 |
H6 |
1.100 |
1.090 |
| C05 |
H7 |
1.100 |
1.090 |
| C09 |
H8 |
1.080 |
1.081 |
| C10 |
H9 |
1.080 |
1.081 |
| C12 |
H10 |
1.080 |
1.080 |
| C13 |
H11 |
1.080 |
1.081 |
| C14 |
H12 |
1.080 |
1.080 |
| C16 |
H15 |
1.100 |
1.090 |
| C16 |
H16 |
1.100 |
1.089 |
| O01 |
H17 |
0.950 |
0.967 |
| C14 |
O1 |
1.423 |
1.212 |
Bond Angles for V4H
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C13 |
C12 |
H10 |
120.0 |
120.0 |
| C12 |
C13 |
H11 |
120.3 |
120.0 |
| C11 |
C10 |
H9 |
120.3 |
120.0 |
| C10 |
C09 |
H8 |
120.2 |
120.0 |
| C08 |
C09 |
H8 |
120.1 |
120.0 |
| C08 |
C07 |
N06 |
120.4 |
120.0 |
| C07 |
N06 |
C16 |
121.3 |
120.6 |
| N06 |
C16 |
H15 |
108.2 |
109.6 |
| N06 |
C16 |
H16 |
108.2 |
109.7 |
| N06 |
C05 |
H6 |
107.2 |
109.6 |
| N06 |
C05 |
H7 |
107.2 |
109.7 |
| C16 |
C02 |
H1 |
109.1 |
109.5 |
| C05 |
C04 |
H4 |
108.4 |
109.5 |
| C05 |
C04 |
H5 |
108.4 |
109.5 |
| O01 |
C02 |
H1 |
110.8 |
109.5 |
| C02 |
C03 |
C04 |
112.5 |
109.6 |
| C03 |
C02 |
H1 |
109.5 |
109.5 |
| C02 |
C03 |
H2 |
108.7 |
109.4 |
| C02 |
C03 |
H3 |
108.7 |
109.4 |
| C04 |
C03 |
H2 |
108.7 |
109.4 |
| C04 |
C03 |
H3 |
108.7 |
109.5 |
| C03 |
C04 |
H4 |
108.4 |
109.5 |
| C03 |
C04 |
H5 |
108.4 |
109.5 |
| H2 |
C03 |
H3 |
109.5 |
109.5 |
| H4 |
C04 |
H5 |
109.5 |
109.5 |
| H6 |
C05 |
H7 |
109.5 |
109.6 |
| H12 |
C14 |
O1 |
121.2 |
120.0 |
| H15 |
C16 |
H16 |
109.5 |
109.6 |
Torsion Angles for V4H
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C14 |
C11 |
C10 |
H9 |
359.1 |
360.0 |
| C12 |
C11 |
C10 |
H9 |
178.5 |
180.0 |
| C11 |
C10 |
C09 |
H8 |
181.2 |
180.0 |
| C13 |
C08 |
C09 |
H8 |
179.7 |
180.3 |
| C13 |
C08 |
C07 |
N06 |
104.7 |
318.5 |
| C08 |
C09 |
C10 |
H8 |
180.0 |
179.9 |
| C10 |
C09 |
C08 |
H8 |
180.0 |
180.1 |
| C09 |
C08 |
C07 |
N06 |
285.1 |
138.8 |
| C08 |
C07 |
N06 |
C16 |
0.3 |
174.2 |
| C07 |
N06 |
C16 |
H15 |
302.0 |
6.6 |
| C07 |
N06 |
C16 |
H16 |
60.5 |
246.3 |
| C07 |
N06 |
C05 |
H6 |
270.1 |
113.8 |
| C07 |
N06 |
C05 |
H7 |
27.6 |
353.4 |
| C16 |
N06 |
C05 |
H6 |
90.2 |
293.8 |
| C16 |
N06 |
C05 |
H7 |
207.6 |
173.4 |
| N06 |
C16 |
C02 |
H1 |
285.6 |
294.7 |
| H15 |
C16 |
N06 |
H16 |
241.5 |
120.4 |
| N06 |
C05 |
C04 |
H4 |
132.8 |
185.4 |
| N06 |
C05 |
C04 |
H5 |
251.5 |
65.3 |
| H6 |
C05 |
N06 |
H7 |
242.5 |
120.4 |
| O01 |
C02 |
C16 |
H1 |
240.4 |
239.9 |
| C03 |
C02 |
C16 |
H1 |
120.2 |
119.9 |
| C16 |
C02 |
C03 |
H2 |
54.1 |
58.7 |
| C16 |
C02 |
C03 |
H3 |
173.2 |
178.6 |
| C05 |
C04 |
C03 |
H2 |
275.6 |
301.3 |
| C05 |
C04 |
C03 |
H3 |
156.5 |
181.4 |
| C03 |
C04 |
C05 |
H4 |
239.4 |
120.0 |
| C03 |
C04 |
C05 |
H5 |
120.6 |
240.1 |
| H4 |
C04 |
C05 |
H5 |
241.2 |
120.1 |
| C16 |
C02 |
O01 |
H1 |
118.5 |
120.1 |
| C03 |
C02 |
O01 |
H1 |
238.3 |
239.9 |
| O01 |
C02 |
C03 |
H2 |
296.4 |
298.7 |
| O01 |
C02 |
C03 |
H3 |
55.5 |
58.6 |
| C16 |
C02 |
C03 |
H1 |
240.1 |
240.1 |
| O01 |
C02 |
C03 |
H1 |
122.5 |
120.1 |
| C04 |
C03 |
C02 |
H2 |
239.5 |
240.0 |
| C04 |
C03 |
C02 |
H3 |
120.5 |
120.1 |
| C02 |
C03 |
C04 |
H4 |
275.4 |
181.3 |
| C02 |
C03 |
C04 |
H5 |
156.7 |
301.4 |
| H2 |
C03 |
C02 |
H3 |
240.9 |
240.1 |
| C05 |
C04 |
C03 |
H4 |
120.6 |
240.0 |
| C05 |
C04 |
C03 |
H5 |
239.4 |
120.0 |
| C04 |
C03 |
C02 |
H1 |
53.5 |
58.6 |
| C02 |
C03 |
C04 |
H2 |
120.4 |
120.0 |
| C02 |
C03 |
C04 |
H3 |
239.6 |
240.0 |
| H2 |
C03 |
C04 |
H3 |
119.1 |
119.9 |
| H4 |
C04 |
C03 |
H5 |
118.8 |
240.0 |
| H1 |
C02 |
C03 |
C04 |
53.5 |
58.6 |
| H1 |
C02 |
C03 |
H2 |
174.0 |
178.6 |
| H1 |
C02 |
C03 |
H3 |
293.1 |
298.5 |
| C02 |
C03 |
H2 |
C04 |
237.2 |
239.9 |
| H2 |
C03 |
C02 |
H1 |
174.0 |
178.6 |
| C02 |
C03 |
H2 |
H3 |
118.6 |
119.9 |
| C04 |
C03 |
H2 |
H3 |
241.4 |
240.0 |
| H2 |
C03 |
C04 |
H4 |
155.0 |
61.3 |
| H2 |
C03 |
C04 |
H5 |
36.2 |
181.4 |
| C02 |
C03 |
H3 |
C04 |
122.8 |
120.1 |
| H3 |
C03 |
C02 |
H1 |
293.1 |
298.5 |
| C02 |
C03 |
H3 |
H2 |
241.4 |
240.1 |
| C04 |
C03 |
H3 |
H2 |
118.6 |
119.9 |
| H3 |
C03 |
C04 |
H4 |
35.9 |
301.4 |
| H3 |
C03 |
C04 |
H5 |
277.1 |
61.4 |
| C05 |
C04 |
H4 |
H5 |
118.1 |
239.9 |
| H4 |
C04 |
C03 |
H2 |
155.0 |
61.3 |
| H4 |
C04 |
C03 |
H3 |
35.9 |
301.4 |
| C03 |
C04 |
H4 |
H5 |
241.9 |
120.0 |
| C05 |
C04 |
H5 |
H4 |
241.9 |
120.1 |
| H5 |
C04 |
C03 |
H2 |
36.2 |
181.4 |
| H5 |
C04 |
C03 |
H3 |
277.1 |
61.4 |
| C03 |
C04 |
H5 |
H4 |
118.1 |
239.9 |
| N06 |
C05 |
H6 |
H7 |
115.9 |
239.6 |
| H6 |
C05 |
C04 |
H4 |
11.5 |
305.2 |
| H6 |
C05 |
C04 |
H5 |
130.3 |
185.1 |
| N06 |
C05 |
H7 |
H6 |
244.1 |
120.4 |
| H7 |
C05 |
C04 |
H4 |
254.0 |
65.5 |
| H7 |
C05 |
C04 |
H5 |
12.8 |
305.4 |
| H9 |
C10 |
C09 |
H8 |
1.2 |
0.0 |
| H10 |
C12 |
C13 |
H11 |
359.8 |
359.8 |
| H11 |
C13 |
C12 |
H10 |
359.8 |
359.8 |
| N06 |
C16 |
H15 |
H16 |
117.7 |
239.6 |
| H15 |
C16 |
C02 |
H1 |
164.9 |
54.5 |
| N06 |
C16 |
H16 |
H15 |
242.3 |
120.4 |
| H16 |
C16 |
C02 |
H1 |
46.4 |
174.8 |
| H17 |
O01 |
C02 |
H1 |
61.5 |
300.1 |