PDB Chemical Component V11

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for V11

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
N	C10	1.482	1.487
N	C11	1.475	1.487
N	C15	1.486	1.470
C1	O1	1.462	1.348
C1	C2	1.506	1.476
C1	O2	1.224	1.215
O1	C8	1.431	1.451
C2	C3	1.397	1.396
C2	C7	1.399	1.396
C3	C4	1.401	1.380
O3	C16	1.434	1.429
C4	C5	1.398	1.383
C5	C6	1.395	1.384
C6	C7	1.401	1.379
C8	C9	1.535	1.532
C8	C12	1.536	1.531
C9	C10	1.536	1.537
C10	C14	1.531	1.545
C11	C12	1.535	1.537
C11	C13	1.532	1.547
C13	C14	1.518	1.543
C15	C16	1.535	1.530
C16	C17	1.495	1.507
C17	C18	1.403	1.383
C17	C22	1.401	1.382
C18	C19	1.406	1.383
C19	C20	1.395	1.383
C20	C21	1.397	1.382
C21	C22	1.406	1.382
C7	H7	1.080	1.080
C3	H3	1.080	1.080
C6	H6	1.080	1.080
C5	H5	1.081	1.080
C4	H4	1.080	1.080
C8	H8	1.100	1.091
C12	H121	1.100	1.090
C12	H122	1.100	1.090
C9	H91C	1.100	1.090
C9	H92C	1.100	1.090
C11	H11	1.100	1.090
C13	H131	1.099	1.090
C13	H132	1.101	1.090
C14	H141	1.100	1.090
C14	H142	1.100	1.091
C10	H10	1.100	1.091
C15	H151	1.100	1.090
C15	H152	1.100	1.089
C16	H16	1.100	1.090
O3	HA	0.949	0.966
C22	H22	1.080	1.080
C18	H18	1.080	1.080
C21	H21	1.080	1.081
C20	H20	1.080	1.080
C19	H19	1.080	1.079

Bond Angles for V11

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
N	C10	H10	113.2	112.2
N	C11	H11	114.0	112.8
N	C15	C16	111.9	109.5
N	C15	H151	108.7	109.4
N	C15	H152	108.1	109.5
C2	C1	O1	117.5	120.0
C1	O1	C8	118.2	117.0
C1	C2	C3	121.3	120.1
C1	C2	C7	119.6	120.2
O1	C8	C9	107.8	109.4
O1	C8	C12	109.9	109.5
O1	C8	H8	111.8	109.4
C7	C2	C3	119.0	119.7
C2	C3	C4	120.0	119.8
C2	C3	H3	120.0	120.1
C2	C7	H7	119.4	120.0
C3	C4	H4	119.6	119.9
O3	C16	C17	110.7	109.5
O3	C16	H16	109.1	109.5
C4	C5	H5	120.2	119.9
C5	C6	H6	120.2	119.9
C6	C7	H7	119.4	120.1
C12	C8	C9	113.5	109.7
C8	C9	C10	114.5	108.8
C9	C8	H8	108.0	109.4
C8	C9	H91C	107.9	109.6
C8	C9	H92C	106.7	109.6
C12	C8	H8	105.9	109.4
C8	C12	H121	107.8	109.6
C8	C12	H122	106.5	109.6
C9	C10	H10	110.1	112.6
C10	C14	H141	111.3	110.4
C10	C14	H142	112.4	110.5
C11	C12	H121	107.7	109.5
C11	C12	H122	106.5	109.6
C11	C13	C14	105.4	104.8
C13	C11	H11	111.0	112.2
C11	C13	H131	110.9	110.4
C11	C13	H132	111.7	110.3
C14	C13	H131	110.9	110.4
C14	C13	H132	111.8	110.4
C13	C14	H141	111.3	110.3
C13	C14	H142	112.4	110.3
C15	C16	C17	112.8	109.5
C16	C15	H151	108.7	109.5
C16	C15	H152	108.1	109.5
C15	C16	H16	106.8	109.5
C16	C17	C18	120.2	120.0
C16	C17	C22	121.7	120.0
C17	C16	H16	106.7	109.4
C22	C17	C18	118.1	120.0
C17	C18	C19	121.2	120.0
C17	C18	H18	119.4	120.0
C17	C22	H22	119.7	119.9
C18	C19	H19	119.8	120.0
C19	C20	H20	120.6	120.0
C20	C21	H21	119.5	120.0
C21	C22	H22	119.6	120.1
H121	C12	H122	113.7	109.6
H91C	C9	H92C	113.5	109.7
H131	C13	H132	106.3	110.4
H141	C14	H142	105.4	110.3
H151	C15	H152	111.4	109.5

Torsion Angles for V11

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C10	N	C11	H11	198.2	196.5
C9	C10	N	H10	121.4	124.1
N	C10	C14	H141	95.9	216.0
N	C10	C14	H142	213.9	93.7
N	C11	C12	H121	186.4	176.1
N	C11	C12	H122	64.0	55.9
C13	C11	N	H11	122.0	121.9
N	C11	C13	H131	145.1	144.0
N	C11	C13	H132	263.5	266.3
C15	N	C10	H10	42.7	44.2
C15	N	C11	H11	318.2	315.6
N	C15	C16	C17	158.9	176.5
C16	C15	N	H151	240.0	240.0
C16	C15	N	H152	119.0	120.0
N	C15	C16	H16	42.0	56.6
H151	C15	N	H152	238.9	240.0
O1	C1	C2	C3	157.6	179.9
O1	C1	C2	C7	340.1	0.3
C1	O1	C8	C9	157.9	150.0
C1	O1	C8	C12	282.1	270.3
C1	O1	C8	H8	39.4	30.2
C2	C1	O1	C8	169.2	180.0
C7	C2	C1	C3	182.5	180.3
C1	C2	C3	C4	181.9	179.8
C1	C2	C3	H3	1.9	0.0
C1	C2	C7	H7	358.2	359.9
C12	C8	O1	C9	124.1	120.3
O1	C8	C9	C10	93.1	66.1
C9	C8	O1	H8	118.6	119.8
O1	C8	C9	H91C	213.1	185.9
O1	C8	C9	H92C	335.4	306.3
C12	C8	O1	H8	242.7	240.1
O1	C8	C12	H121	28.3	53.8
O1	C8	C12	H122	150.7	174.0
C3	C2	C1	O1	157.6	179.9
C1	C2	C3	C7	182.4	180.3
C3	C2	C7	H7	180.6	180.2
C2	C3	C4	H4	180.3	180.3
C7	C2	C1	O1	340.1	0.3
C1	C2	C7	C3	177.6	179.7
C7	C2	C3	C4	359.4	359.4
C7	C2	C3	H3	179.5	179.7
C6	C7	C2	H7	180.0	180.1
C2	C3	C4	H3	180.0	180.3
C3	C4	C5	H5	180.0	179.7
C15	C16	O3	C17	234.3	240.0
O3	C16	C15	H151	163.4	176.6
O3	C16	C15	H152	42.4	56.6
C15	C16	O3	H16	117.2	120.0
O3	C16	C17	C18	102.3	145.0
O3	C16	C17	C22	283.6	325.2
C17	C16	O3	H16	242.9	240.0
C2	C3	C4	C5	0.3	0.6
C4	C5	C6	H6	180.0	180.0
C5	C6	C7	H7	179.7	180.1
C6	C7	C2	C3	0.6	0.3
C2	C7	C6	H7	180.0	179.9
O1	C8	C9	C12	121.9	120.1
O1	C8	C9	H8	239.0	240.1
C12	C8	C9	H8	117.1	120.0
C9	C8	C12	H121	149.0	173.8
C9	C8	C12	H122	271.4	294.1
C8	C9	C10	H10	176.5	188.0
H91C	C9	C8	H92C	237.8	239.6
O1	C8	C12	C9	239.3	239.9
O1	C8	C12	H8	120.9	119.9
C12	C8	C9	C10	331.2	306.0
C9	C8	C12	H8	241.7	240.0
C12	C8	C9	H91C	91.2	65.8
C12	C8	C9	H92C	213.4	186.2
C11	C12	C8	H121	240.0	240.2
C11	C12	C8	H122	117.6	119.9
H121	C12	C8	H122	237.6	239.7
N	C10	C9	H10	236.6	236.1
C10	C9	C8	H8	214.1	185.9
C8	C9	C10	H91C	120.0	119.8
C8	C9	C10	H92C	242.2	240.2
C9	C10	C14	H141	211.0	329.8
C9	C10	C14	H142	329.0	207.4
C8	C9	C10	C14	298.7	312.4
C10	C14	C13	H131	239.4	241.2
C10	C14	C13	H132	121.0	118.8
C13	C14	C10	H141	240.0	118.8
C13	C14	C10	H142	122.0	241.1
H141	C14	C10	H142	242.0	122.3
C11	C12	C8	C9	29.0	54.0
C11	C12	C8	H8	147.4	174.0
C8	C12	C11	H121	120.0	119.8
C8	C12	C11	H122	242.4	240.1
H121	C12	C11	H122	122.4	120.2
N	C11	C13	H11	236.1	237.7
C13	C11	C12	H121	300.0	287.7
C13	C11	C12	H122	177.6	167.5
C14	C13	C11	H131	240.0	241.1
C14	C13	C11	H132	121.6	118.8
C11	C13	C14	H141	239.4	118.9
C11	C13	C14	H142	121.4	241.1
H131	C13	C11	H132	241.6	237.7
C10	C14	C13	H141	120.0	241.1
C10	C14	C13	H142	238.0	119.0
C14	C13	C11	H11	149.0	147.5
C11	C13	C14	H131	120.0	118.8
C11	C13	C14	H132	238.4	241.2
H131	C13	C14	H132	118.4	122.3
H141	C14	C13	H142	118.0	237.8
N	C15	C16	H151	120.0	119.9
N	C15	C16	H152	241.0	240.0
O3	C16	C15	C17	124.5	120.0
O3	C16	C15	H16	241.4	240.0
C15	C16	C17	C18	226.7	265.0
C15	C16	C17	C22	48.0	85.3
C17	C16	C15	H16	116.9	120.0
H151	C15	C16	H152	121.1	120.0
O3	C16	C17	H16	118.6	120.0
C17	C16	C15	H151	38.9	56.6
C17	C16	C15	H152	277.9	296.6
C15	C16	C17	H16	243.0	240.0
C22	C17	C16	C18	181.3	180.3
C16	C17	C18	C19	180.4	179.6
C16	C17	C18	H18	0.4	0.0
C16	C17	C22	H22	359.6	0.0
C16	C17	C18	C22	181.2	180.3
C18	C17	C16	H16	343.7	25.0
C18	C17	C22	H22	180.9	180.3
C17	C18	C19	H19	180.3	180.3
C16	C17	C22	C18	178.8	179.7
C22	C17	C16	H16	165.0	205.2
C22	C17	C18	C19	359.2	359.4
C22	C17	C18	H18	179.2	179.8
C21	C22	C17	H22	180.0	180.0
C17	C18	C19	H18	180.0	180.4
C18	C19	C20	H20	180.1	179.7
C17	C18	C19	C20	0.3	0.6
C19	C20	C21	H21	180.0	180.0
C20	C21	C22	H22	179.5	180.0
C21	C22	C17	C18	0.9	0.3
C17	C22	C21	H22	180.0	180.0
H7	C7	C2	C3	180.6	180.2
C2	C3	H3	C4	180.0	179.7
H3	C3	C4	H4	0.2	0.1
H6	C6	C7	H7	359.7	0.1
H5	C5	C6	H6	0.0	360.0
H4	C4	C5	H5	0.0	360.0
O1	C8	H8	C9	118.4	119.9
O1	C8	H8	C12	240.4	240.1
C12	C8	H8	C9	238.1	239.8
H8	C8	C9	C10	214.1	185.9
H8	C8	C9	H91C	334.1	305.8
H8	C8	C9	H92C	96.3	66.2
H8	C8	C12	H121	267.4	293.9
H8	C8	C12	H122	29.8	54.1
H121	C12	C8	C9	149.0	173.8
H121	C12	C8	H8	267.4	293.9
C8	C12	H121	H122	117.8	120.3
C11	C12	H121	H122	242.2	239.7
H122	C12	C8	C9	271.4	294.1
H122	C12	C8	H8	29.8	54.1
C8	C12	H122	H121	241.5	239.7
C11	C12	H122	H121	118.5	120.2
C8	C9	H91C	C10	235.9	240.6
H91C	C9	C8	H8	334.1	305.8
C8	C9	H91C	H92C	118.0	120.3
H91C	C9	C10	H10	56.5	68.2
C8	C9	H92C	C10	122.8	119.3
H92C	C9	C8	H8	96.3	66.2
C8	C9	H92C	H91C	241.4	239.7
H92C	C9	C10	H10	294.3	307.8
H11	C11	C12	H121	62.4	51.8
H11	C11	C12	H122	300.0	291.5
H11	C11	C13	C14	149.0	147.5
H11	C11	C13	H131	269.0	266.3
H11	C11	C13	H132	27.4	28.6
C11	C13	H131	C14	243.3	244.6
H131	C13	C11	H11	269.0	266.3
C11	C13	H131	H132	121.7	122.2
C14	C13	H131	H132	238.3	237.7
H131	C13	C14	H141	119.4	0.0
H131	C13	C14	H142	1.4	122.2
C11	C13	H132	C14	117.8	115.4
H132	C13	C11	H11	27.4	28.6
C11	C13	H132	H131	238.9	237.7
C14	C13	H132	H131	121.1	122.3
H132	C13	C14	H141	1.0	237.7
H132	C13	C14	H142	242.9	359.9
C10	C14	H141	H142	122.1	237.6
H141	C14	C13	H131	119.4	0.0
H141	C14	C13	H132	1.0	237.7
C13	C14	H141	H142	237.8	122.2
C10	C14	H142	H141	238.6	122.3
H142	C14	C13	H131	1.4	122.2
H142	C14	C13	H132	242.9	359.9
C13	C14	H142	H141	121.4	237.8
H10	C10	C14	H141	332.6	94.3
H10	C10	C14	H142	90.6	332.0
N	C15	H151	C16	238.0	240.0
N	C15	H151	H152	119.0	120.0
H151	C15	C16	C17	38.9	56.6
C16	C15	H151	H152	241.0	240.0
H151	C15	C16	H16	282.0	296.6
N	C15	H152	C16	121.3	120.0
N	C15	H152	H151	240.7	240.0
H152	C15	C16	C17	277.9	296.6
C16	C15	H152	H151	119.3	120.0
H152	C15	C16	H16	161.0	176.6
O3	C16	H16	C17	240.4	240.0
C15	C16	H16	C17	120.9	120.0
H16	C16	C15	H151	282.0	296.6
H16	C16	C15	H152	161.0	176.6
H16	C16	C17	C18	343.7	25.0
H16	C16	C17	C22	165.0	205.2
HA	O3	C16	C17	20.3	60.0
HA	O3	C16	H16	137.4	180.0
H22	C22	C17	C18	180.9	180.3
C17	C18	H18	C19	180.0	179.6
H18	C18	C19	H19	0.4	359.9
H21	C21	C22	H22	359.5	360.0
H20	C20	C21	H21	0.0	360.0
H19	C19	C20	H20	0.1	0.0