PDB Chemical Component V0Q
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for V0Q
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C01 |
C02 |
1.527 |
1.531 |
| C02 |
N03 |
1.310 |
1.469 |
| N03 |
C18 |
1.373 |
1.469 |
| N03 |
C04 |
1.394 |
1.469 |
| C18 |
C17 |
1.547 |
1.532 |
| C04 |
C05 |
1.558 |
1.533 |
| C17 |
N06 |
1.461 |
1.470 |
| N06 |
C05 |
1.450 |
1.471 |
| N06 |
S07 |
1.720 |
1.656 |
| O16 |
S07 |
1.432 |
1.421 |
| S07 |
O08 |
1.496 |
1.421 |
| S07 |
C09 |
1.816 |
1.761 |
| C09 |
C10 |
1.389 |
1.382 |
| C09 |
C15 |
1.394 |
1.382 |
| C10 |
C11 |
1.400 |
1.382 |
| C15 |
C14 |
1.411 |
1.382 |
| C11 |
C12 |
1.410 |
1.383 |
| C14 |
C12 |
1.376 |
1.383 |
| C12 |
C13 |
1.514 |
1.507 |
| C13 |
O1 |
1.428 |
1.429 |
| C01 |
H1 |
1.100 |
1.089 |
| C01 |
H2 |
1.100 |
1.090 |
| C01 |
H3 |
1.100 |
1.090 |
| C02 |
H4 |
1.100 |
1.090 |
| C02 |
H5 |
1.100 |
1.089 |
| C04 |
H6 |
1.100 |
1.090 |
| C04 |
H7 |
1.100 |
1.090 |
| C05 |
H8 |
1.100 |
1.090 |
| C05 |
H9 |
1.100 |
1.090 |
| C10 |
H10 |
1.081 |
1.080 |
| C11 |
H11 |
1.080 |
1.079 |
| C13 |
H12 |
1.100 |
1.090 |
| C13 |
H13 |
1.100 |
1.090 |
| C14 |
H14 |
1.080 |
1.080 |
| C15 |
H15 |
1.080 |
1.080 |
| C17 |
H16 |
1.100 |
1.090 |
| C17 |
H17 |
1.100 |
1.090 |
| C18 |
H18 |
1.100 |
1.091 |
| C18 |
H19 |
1.100 |
1.090 |
| O1 |
H21 |
0.950 |
0.967 |
Bond Angles for V0Q
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C01 |
C02 |
N03 |
111.4 |
109.5 |
| C02 |
C01 |
H1 |
109.5 |
109.4 |
| C02 |
C01 |
H2 |
109.5 |
109.5 |
| C02 |
C01 |
H3 |
109.4 |
109.5 |
| C01 |
C02 |
H4 |
109.0 |
109.5 |
| C01 |
C02 |
H5 |
109.0 |
109.5 |
| C02 |
N03 |
C18 |
112.9 |
111.0 |
| C02 |
N03 |
C04 |
114.1 |
111.0 |
| N03 |
C02 |
H4 |
109.0 |
109.5 |
| N03 |
C02 |
H5 |
109.0 |
109.5 |
| N03 |
C18 |
H18 |
107.7 |
109.5 |
| N03 |
C18 |
H19 |
107.7 |
109.5 |
| N03 |
C04 |
H6 |
107.3 |
109.5 |
| N03 |
C04 |
H7 |
107.3 |
109.5 |
| C18 |
C17 |
N06 |
113.0 |
108.5 |
| C18 |
C17 |
H16 |
108.6 |
109.6 |
| C18 |
C17 |
H17 |
108.6 |
109.8 |
| C05 |
C04 |
H6 |
107.3 |
109.5 |
| C05 |
C04 |
H7 |
107.3 |
109.4 |
| C04 |
C05 |
H8 |
108.9 |
109.6 |
| C04 |
C05 |
H9 |
109.0 |
109.7 |
| C17 |
N06 |
S07 |
118.9 |
120.9 |
| N06 |
C17 |
H16 |
108.6 |
109.7 |
| N06 |
C17 |
H17 |
108.6 |
109.6 |
| N06 |
C05 |
H8 |
108.9 |
109.6 |
| N06 |
C05 |
H9 |
108.9 |
109.8 |
| N06 |
S07 |
O16 |
113.4 |
106.4 |
| N06 |
S07 |
O08 |
114.4 |
106.4 |
| C10 |
C09 |
C15 |
122.1 |
120.0 |
| C09 |
C10 |
C11 |
119.3 |
120.0 |
| C09 |
C10 |
H10 |
120.4 |
120.0 |
| C09 |
C15 |
C14 |
118.6 |
120.0 |
| C09 |
C15 |
H15 |
120.7 |
120.0 |
| C10 |
C11 |
C12 |
118.8 |
120.0 |
| C11 |
C10 |
H10 |
120.4 |
119.9 |
| C10 |
C11 |
H11 |
120.6 |
120.1 |
| C15 |
C14 |
H14 |
120.2 |
120.0 |
| C11 |
C12 |
C13 |
117.3 |
120.0 |
| C12 |
C11 |
H11 |
120.7 |
119.9 |
| C12 |
C13 |
O1 |
112.1 |
109.4 |
| C12 |
C13 |
H12 |
108.8 |
109.4 |
| C12 |
C13 |
H13 |
108.8 |
109.5 |
| O1 |
C13 |
H12 |
108.8 |
109.5 |
| O1 |
C13 |
H13 |
108.8 |
109.5 |
| C13 |
O1 |
H21 |
109.5 |
113.9 |
| H1 |
C01 |
H2 |
109.4 |
109.5 |
| H1 |
C01 |
H3 |
109.5 |
109.5 |
| H2 |
C01 |
H3 |
109.5 |
109.5 |
| H4 |
C02 |
H5 |
109.4 |
109.5 |
| H6 |
C04 |
H7 |
109.4 |
109.6 |
| H8 |
C05 |
H9 |
109.4 |
109.6 |
| H12 |
C13 |
H13 |
109.5 |
109.5 |
| H16 |
C17 |
H17 |
109.5 |
109.6 |
| H18 |
C18 |
H19 |
109.5 |
109.5 |
Torsion Angles for V0Q
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C01 |
C02 |
N03 |
C18 |
73.2 |
190.0 |
| C01 |
C02 |
N03 |
C04 |
290.0 |
65.7 |
| N03 |
C02 |
C01 |
H4 |
239.7 |
240.0 |
| N03 |
C02 |
C01 |
H5 |
120.3 |
120.0 |
| H1 |
C01 |
C02 |
H2 |
240.0 |
239.9 |
| H1 |
C01 |
C02 |
H3 |
120.0 |
120.0 |
| H2 |
C01 |
C02 |
H3 |
240.0 |
240.0 |
| H4 |
C02 |
C01 |
H5 |
240.6 |
240.0 |
| N03 |
C02 |
C01 |
H1 |
180.0 |
180.0 |
| N03 |
C02 |
C01 |
H2 |
300.0 |
300.1 |
| N03 |
C02 |
C01 |
H3 |
60.0 |
60.0 |
| C01 |
C02 |
N03 |
H4 |
120.3 |
120.0 |
| C01 |
C02 |
N03 |
H5 |
239.7 |
240.0 |
| C02 |
N03 |
C18 |
H18 |
322.3 |
52.8 |
| C02 |
N03 |
C18 |
H19 |
80.3 |
292.7 |
| C02 |
N03 |
C04 |
H6 |
278.3 |
67.3 |
| C02 |
N03 |
C04 |
H7 |
35.8 |
307.2 |
| H4 |
C02 |
N03 |
H5 |
119.4 |
120.0 |
| C02 |
N03 |
C18 |
C04 |
219.6 |
235.8 |
| C18 |
N03 |
C02 |
H4 |
312.9 |
70.0 |
| C18 |
N03 |
C02 |
H5 |
193.5 |
310.0 |
| C18 |
N03 |
C04 |
H6 |
138.3 |
303.1 |
| C18 |
N03 |
C04 |
H7 |
255.8 |
183.0 |
| N03 |
C18 |
C17 |
N06 |
40.6 |
53.8 |
| N03 |
C18 |
C17 |
H16 |
161.1 |
173.6 |
| N03 |
C18 |
C17 |
H17 |
280.1 |
294.0 |
| H18 |
C18 |
N03 |
H19 |
242.0 |
120.0 |
| C02 |
N03 |
C04 |
C18 |
140.0 |
124.2 |
| C04 |
N03 |
C02 |
H4 |
169.6 |
305.7 |
| C04 |
N03 |
C02 |
H5 |
50.3 |
185.7 |
| C05 |
C04 |
N03 |
H6 |
238.8 |
120.0 |
| C05 |
C04 |
N03 |
H7 |
121.2 |
240.1 |
| N03 |
C04 |
C05 |
H8 |
82.8 |
65.9 |
| N03 |
C04 |
C05 |
H9 |
202.2 |
186.3 |
| H6 |
C04 |
N03 |
H7 |
242.5 |
120.1 |
| C02 |
N03 |
C18 |
C17 |
201.3 |
172.7 |
| C18 |
C17 |
N06 |
S07 |
157.8 |
128.8 |
| N06 |
C17 |
C18 |
H16 |
239.5 |
240.2 |
| N06 |
C17 |
C18 |
H17 |
120.5 |
119.8 |
| H16 |
C17 |
C18 |
H17 |
241.0 |
239.6 |
| C02 |
N03 |
C04 |
C05 |
157.1 |
187.3 |
| N03 |
C04 |
C05 |
H6 |
121.2 |
240.1 |
| N03 |
C04 |
C05 |
H7 |
238.8 |
119.9 |
| N06 |
C05 |
C04 |
H8 |
239.7 |
240.3 |
| N06 |
C05 |
C04 |
H9 |
120.3 |
119.9 |
| H6 |
C04 |
C05 |
H7 |
117.5 |
239.9 |
| H8 |
C05 |
C04 |
H9 |
240.7 |
239.6 |
| C18 |
C17 |
N06 |
H16 |
120.5 |
119.7 |
| C18 |
C17 |
N06 |
H17 |
239.5 |
240.1 |
| C17 |
N06 |
C05 |
H8 |
297.1 |
291.5 |
| C17 |
N06 |
C05 |
H9 |
177.8 |
171.0 |
| C17 |
N06 |
S07 |
O16 |
324.7 |
203.6 |
| C17 |
N06 |
S07 |
O08 |
202.1 |
336.5 |
| H16 |
C17 |
N06 |
H17 |
119.0 |
120.4 |
| N06 |
C05 |
C04 |
H6 |
201.3 |
66.1 |
| N06 |
C05 |
C04 |
H7 |
83.8 |
186.2 |
| C04 |
C05 |
N06 |
H8 |
120.3 |
119.7 |
| C04 |
C05 |
N06 |
H9 |
239.7 |
240.2 |
| H8 |
C05 |
N06 |
H9 |
119.3 |
120.5 |
| S07 |
N06 |
C17 |
H16 |
37.3 |
9.0 |
| S07 |
N06 |
C17 |
H17 |
278.3 |
248.7 |
| S07 |
N06 |
C05 |
H8 |
78.3 |
111.5 |
| S07 |
N06 |
C05 |
H9 |
319.0 |
351.0 |
| N06 |
S07 |
O16 |
O08 |
233.2 |
122.9 |
| N06 |
S07 |
O08 |
O16 |
126.2 |
237.0 |
| S07 |
C09 |
C10 |
H10 |
358.5 |
359.7 |
| S07 |
C09 |
C15 |
H15 |
0.0 |
0.3 |
| C10 |
C09 |
C15 |
C14 |
357.8 |
0.1 |
| C10 |
C09 |
C15 |
H15 |
177.8 |
180.1 |
| C09 |
C10 |
C11 |
C12 |
0.9 |
360.0 |
| C11 |
C10 |
C09 |
H10 |
180.0 |
180.0 |
| C09 |
C10 |
C11 |
H11 |
180.9 |
180.0 |
| C15 |
C09 |
C10 |
C11 |
0.7 |
360.0 |
| C15 |
C09 |
C10 |
H10 |
180.7 |
180.0 |
| C09 |
C15 |
C14 |
H14 |
181.9 |
180.0 |
| C11 |
C10 |
C09 |
C15 |
0.7 |
360.0 |
| C09 |
C10 |
C11 |
H10 |
180.0 |
180.0 |
| C10 |
C11 |
C12 |
C13 |
179.7 |
180.0 |
| C12 |
C11 |
C10 |
H11 |
180.0 |
180.0 |
| C09 |
C15 |
C14 |
H15 |
180.0 |
179.9 |
| C12 |
C11 |
C10 |
H10 |
180.9 |
180.0 |
| C10 |
C11 |
C12 |
H11 |
180.0 |
180.0 |
| C11 |
C12 |
C13 |
O1 |
191.1 |
90.0 |
| C11 |
C12 |
C13 |
H12 |
311.6 |
210.0 |
| C11 |
C12 |
C13 |
H13 |
70.8 |
330.0 |
| C09 |
C15 |
C14 |
C12 |
2.0 |
359.8 |
| C14 |
C12 |
C11 |
H11 |
178.9 |
180.0 |
| C14 |
C12 |
C13 |
O1 |
12.0 |
270.0 |
| C14 |
C12 |
C13 |
H12 |
132.4 |
30.0 |
| C14 |
C12 |
C13 |
H13 |
251.6 |
150.0 |
| C13 |
C12 |
C11 |
H11 |
359.7 |
359.9 |
| O1 |
C13 |
C12 |
H12 |
239.6 |
240.0 |
| O1 |
C13 |
C12 |
H13 |
120.4 |
120.0 |
| C12 |
C13 |
O1 |
H21 |
180.0 |
180.0 |
| H12 |
C13 |
C12 |
H13 |
240.8 |
240.0 |
| C12 |
C13 |
O1 |
H12 |
120.4 |
120.0 |
| C12 |
C13 |
O1 |
H13 |
239.6 |
240.0 |
| H12 |
C13 |
O1 |
H13 |
119.2 |
120.0 |
| H1 |
C01 |
C02 |
N03 |
180.0 |
180.0 |
| C02 |
C01 |
H1 |
H2 |
120.0 |
120.0 |
| C02 |
C01 |
H1 |
H3 |
240.0 |
240.0 |
| H1 |
C01 |
C02 |
H4 |
300.3 |
300.0 |
| H1 |
C01 |
C02 |
H5 |
59.7 |
60.0 |
| H2 |
C01 |
H1 |
H3 |
120.0 |
120.0 |
| H2 |
C01 |
C02 |
N03 |
300.0 |
300.1 |
| C02 |
C01 |
H2 |
H1 |
240.0 |
240.0 |
| C02 |
C01 |
H2 |
H3 |
120.0 |
120.0 |
| H2 |
C01 |
C02 |
H4 |
60.3 |
60.0 |
| H2 |
C01 |
C02 |
H5 |
179.7 |
180.0 |
| H1 |
C01 |
H2 |
H3 |
240.0 |
240.0 |
| H3 |
C01 |
C02 |
N03 |
60.0 |
60.0 |
| C02 |
C01 |
H3 |
H1 |
120.0 |
119.9 |
| C02 |
C01 |
H3 |
H2 |
240.0 |
240.0 |
| H3 |
C01 |
C02 |
H4 |
180.3 |
180.0 |
| H3 |
C01 |
C02 |
H5 |
299.7 |
300.0 |
| H1 |
C01 |
H3 |
H2 |
120.0 |
120.1 |
| C01 |
C02 |
H4 |
N03 |
238.2 |
240.0 |
| H4 |
C02 |
C01 |
H1 |
300.3 |
300.0 |
| H4 |
C02 |
C01 |
H2 |
60.3 |
60.0 |
| H4 |
C02 |
C01 |
H3 |
180.3 |
180.0 |
| C01 |
C02 |
H4 |
H5 |
119.1 |
120.0 |
| H4 |
C02 |
N03 |
C18 |
312.9 |
70.0 |
| H4 |
C02 |
N03 |
C04 |
169.6 |
305.7 |
| N03 |
C02 |
H4 |
H5 |
240.9 |
240.0 |
| C01 |
C02 |
H5 |
N03 |
121.8 |
120.0 |
| H5 |
C02 |
C01 |
H1 |
59.7 |
60.0 |
| H5 |
C02 |
C01 |
H2 |
179.7 |
180.0 |
| H5 |
C02 |
C01 |
H3 |
299.7 |
300.0 |
| C01 |
C02 |
H5 |
H4 |
240.9 |
240.0 |
| H5 |
C02 |
N03 |
C18 |
193.5 |
310.0 |
| H5 |
C02 |
N03 |
C04 |
50.3 |
185.7 |
| N03 |
C02 |
H5 |
H4 |
119.1 |
120.0 |
| N03 |
C04 |
H6 |
H7 |
116.1 |
239.9 |
| C05 |
C04 |
H6 |
H7 |
243.9 |
120.0 |
| H6 |
C04 |
C05 |
H8 |
321.6 |
185.8 |
| H6 |
C04 |
C05 |
H9 |
80.9 |
306.2 |
| N03 |
C04 |
H7 |
H6 |
243.9 |
120.1 |
| C05 |
C04 |
H7 |
H6 |
116.1 |
239.9 |
| H7 |
C04 |
C05 |
H8 |
204.1 |
305.9 |
| H7 |
C04 |
C05 |
H9 |
323.4 |
66.3 |
| H8 |
C05 |
C04 |
H6 |
321.6 |
185.8 |
| H8 |
C05 |
C04 |
H7 |
204.1 |
305.9 |
| C04 |
C05 |
H8 |
H9 |
119.0 |
120.4 |
| N06 |
C05 |
H8 |
H9 |
241.0 |
239.4 |
| H9 |
C05 |
C04 |
H6 |
80.9 |
306.2 |
| H9 |
C05 |
C04 |
H7 |
323.4 |
66.3 |
| C04 |
C05 |
H9 |
H8 |
241.0 |
239.6 |
| N06 |
C05 |
H9 |
H8 |
119.0 |
120.5 |
| H10 |
C10 |
C09 |
C15 |
180.7 |
180.0 |
| C09 |
C10 |
H10 |
C11 |
180.0 |
180.0 |
| H10 |
C10 |
C11 |
C12 |
180.9 |
180.0 |
| H10 |
C10 |
C11 |
H11 |
0.9 |
0.0 |
| C10 |
C11 |
H11 |
C12 |
180.0 |
180.0 |
| H11 |
C11 |
C10 |
H10 |
0.9 |
0.0 |
| H11 |
C11 |
C12 |
C13 |
359.7 |
359.9 |
| C12 |
C13 |
H12 |
O1 |
237.5 |
240.0 |
| C12 |
C13 |
H12 |
H13 |
118.8 |
120.0 |
| O1 |
C13 |
H12 |
H13 |
241.2 |
239.9 |
| H12 |
C13 |
O1 |
H21 |
59.6 |
60.0 |
| C12 |
C13 |
H13 |
O1 |
122.4 |
120.0 |
| C12 |
C13 |
H13 |
H12 |
241.2 |
240.1 |
| O1 |
C13 |
H13 |
H12 |
118.8 |
120.1 |
| H13 |
C13 |
O1 |
H21 |
300.4 |
300.0 |
| C09 |
C15 |
H15 |
C14 |
180.0 |
180.1 |
| H15 |
C15 |
C14 |
H14 |
1.9 |
0.1 |
| C18 |
C17 |
H16 |
N06 |
236.8 |
240.9 |
| C18 |
C17 |
H16 |
H17 |
118.4 |
120.5 |
| H16 |
C17 |
N06 |
S07 |
37.3 |
9.0 |
| N06 |
C17 |
H16 |
H17 |
241.6 |
239.6 |
| C18 |
C17 |
H17 |
N06 |
123.2 |
119.1 |
| C18 |
C17 |
H17 |
H16 |
241.6 |
239.5 |
| H17 |
C17 |
N06 |
S07 |
278.3 |
248.7 |
| N06 |
C17 |
H17 |
H16 |
118.4 |
120.4 |
| N03 |
C18 |
H18 |
H19 |
116.9 |
239.9 |
| H18 |
C18 |
C17 |
N06 |
279.6 |
173.8 |
| H18 |
C18 |
C17 |
H16 |
40.1 |
293.6 |
| H18 |
C18 |
C17 |
H17 |
159.0 |
54.0 |
| N03 |
C18 |
H19 |
H18 |
243.1 |
120.0 |
| H19 |
C18 |
C17 |
N06 |
161.6 |
293.8 |
| H19 |
C18 |
C17 |
H16 |
282.1 |
53.6 |
| H19 |
C18 |
C17 |
H17 |
41.0 |
174.0 |
| H21 |
O1 |
C13 |
H12 |
59.6 |
60.0 |
| H21 |
O1 |
C13 |
H13 |
300.4 |
300.0 |