PDB Chemical Component URS
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for URS
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N1 |
C3 |
1.298 |
1.398 |
N1 |
C7 |
1.448 |
1.348 |
N1 |
H1N |
1.019 |
0.970 |
N2 |
C7 |
1.308 |
1.348 |
N2 |
H2N2 |
1.020 |
0.969 |
N2 |
H1N2 |
1.020 |
0.970 |
C1 |
C2 |
1.413 |
1.381 |
C1 |
C6 |
1.410 |
1.382 |
C1 |
H1 |
1.102 |
1.080 |
C2 |
C3 |
1.441 |
1.389 |
C2 |
H2 |
1.103 |
1.079 |
C3 |
C4 |
1.403 |
1.388 |
C4 |
C5 |
1.421 |
1.381 |
C4 |
H4 |
1.104 |
1.080 |
C5 |
C6 |
1.417 |
1.382 |
C5 |
H5 |
1.104 |
1.080 |
C6 |
H6 |
1.103 |
1.081 |
C7 |
S1 |
1.612 |
1.710 |
Bond Angles for URS
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C3 |
N1 |
C7 |
133.5 |
119.9 |
C3 |
N1 |
H1N |
104.0 |
120.1 |
N1 |
C3 |
C2 |
121.5 |
120.0 |
N1 |
C3 |
C4 |
119.9 |
120.1 |
C7 |
N1 |
H1N |
103.9 |
120.0 |
N1 |
C7 |
N2 |
117.4 |
120.0 |
N1 |
C7 |
S1 |
123.9 |
120.0 |
C7 |
N2 |
H2N2 |
118.8 |
120.0 |
C7 |
N2 |
H1N2 |
117.3 |
120.0 |
N2 |
C7 |
S1 |
118.8 |
120.0 |
H2N2 |
N2 |
H1N2 |
123.9 |
120.0 |
C2 |
C1 |
C6 |
118.8 |
120.1 |
C2 |
C1 |
H1 |
120.7 |
119.9 |
C1 |
C2 |
C3 |
121.7 |
119.9 |
C1 |
C2 |
H2 |
118.2 |
120.0 |
C6 |
C1 |
H1 |
120.5 |
120.0 |
C1 |
C6 |
C5 |
120.0 |
120.2 |
C1 |
C6 |
H6 |
119.8 |
119.9 |
C3 |
C2 |
H2 |
120.1 |
120.0 |
C2 |
C3 |
C4 |
118.5 |
119.8 |
C3 |
C4 |
C5 |
120.0 |
120.0 |
C3 |
C4 |
H4 |
119.4 |
120.1 |
C5 |
C4 |
H4 |
120.7 |
120.0 |
C4 |
C5 |
C6 |
121.0 |
120.1 |
C4 |
C5 |
H5 |
119.6 |
120.0 |
C6 |
C5 |
H5 |
119.4 |
119.9 |
C5 |
C6 |
H6 |
120.2 |
120.0 |
Torsion Angles for URS
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C7 |
N1 |
C3 |
H1N |
125.3 |
180.0 |
C3 |
N1 |
C7 |
N2 |
318.6 |
174.2 |
C3 |
N1 |
C7 |
S1 |
140.4 |
354.2 |
C1 |
C2 |
C3 |
N1 |
179.1 |
180.0 |
N1 |
C3 |
C2 |
H2 |
359.2 |
360.0 |
C2 |
C3 |
N1 |
C4 |
180.9 |
180.4 |
N1 |
C3 |
C4 |
C5 |
181.1 |
179.7 |
N1 |
C3 |
C4 |
H4 |
1.1 |
0.3 |
C3 |
N1 |
C7 |
H1N |
234.7 |
180.0 |
C7 |
N1 |
C3 |
C2 |
141.6 |
138.5 |
C7 |
N1 |
C3 |
C4 |
320.7 |
318.2 |
N1 |
C7 |
N2 |
H2N2 |
1.7 |
180.0 |
N1 |
C7 |
N2 |
H1N2 |
179.9 |
359.7 |
N2 |
C7 |
N1 |
S1 |
178.2 |
180.0 |
C3 |
N1 |
H1N |
C7 |
142.4 |
180.0 |
H1N |
N1 |
C3 |
C2 |
16.3 |
318.5 |
H1N |
N1 |
C3 |
C4 |
195.4 |
138.2 |
H1N |
N1 |
C7 |
N2 |
83.9 |
354.2 |
H1N |
N1 |
C7 |
S1 |
265.7 |
174.2 |
N2 |
C7 |
N1 |
H1N |
83.9 |
354.2 |
N1 |
C7 |
N2 |
S1 |
181.7 |
180.0 |
H2N2 |
N2 |
C7 |
H1N2 |
181.8 |
180.3 |
C7 |
N2 |
H2N2 |
H1N2 |
178.1 |
179.7 |
H2N2 |
N2 |
C7 |
S1 |
180.0 |
360.0 |
C7 |
N2 |
H1N2 |
H2N2 |
181.9 |
180.3 |
H1N2 |
N2 |
C7 |
S1 |
358.3 |
179.7 |
N1 |
C3 |
C2 |
C1 |
179.1 |
180.0 |
C6 |
C1 |
C2 |
H1 |
180.0 |
180.0 |
C2 |
C1 |
C6 |
C5 |
0.3 |
0.1 |
C2 |
C1 |
C6 |
H6 |
180.4 |
180.0 |
C3 |
C2 |
C1 |
H2 |
180.0 |
180.0 |
C1 |
C2 |
C3 |
C4 |
360.0 |
0.3 |
C2 |
C1 |
C6 |
H1 |
180.0 |
180.0 |
C6 |
C1 |
C2 |
C3 |
359.7 |
360.0 |
C6 |
C1 |
C2 |
H2 |
179.7 |
180.0 |
C4 |
C5 |
C6 |
C1 |
360.0 |
359.6 |
C1 |
C6 |
C5 |
H5 |
180.0 |
180.0 |
C5 |
C6 |
C1 |
H6 |
180.0 |
180.0 |
C2 |
C1 |
H1 |
C6 |
180.0 |
180.0 |
H1 |
C1 |
C2 |
C3 |
179.7 |
180.0 |
H1 |
C1 |
C2 |
H2 |
359.7 |
360.0 |
H1 |
C1 |
C6 |
C5 |
180.3 |
180.1 |
H1 |
C1 |
C6 |
H6 |
0.3 |
0.0 |
C2 |
C3 |
N1 |
C7 |
141.6 |
138.5 |
C2 |
C3 |
N1 |
H1N |
16.3 |
318.5 |
N1 |
C3 |
C2 |
C4 |
179.2 |
179.6 |
C3 |
C2 |
C1 |
C6 |
359.7 |
360.0 |
C3 |
C2 |
C1 |
H1 |
179.7 |
180.0 |
C1 |
C2 |
C3 |
H2 |
180.0 |
180.0 |
C2 |
C3 |
C4 |
C5 |
0.3 |
359.3 |
C2 |
C3 |
C4 |
H4 |
180.2 |
179.9 |
H2 |
C2 |
C1 |
C6 |
179.7 |
180.0 |
H2 |
C2 |
C1 |
H1 |
359.7 |
360.0 |
C1 |
C2 |
H2 |
C3 |
180.0 |
180.0 |
H2 |
C2 |
C3 |
C4 |
180.0 |
180.3 |
C4 |
C3 |
N1 |
C7 |
320.7 |
318.2 |
C4 |
C3 |
N1 |
H1N |
195.4 |
138.2 |
N1 |
C3 |
C4 |
C2 |
180.8 |
180.4 |
C4 |
C3 |
C2 |
H2 |
180.0 |
180.3 |
C5 |
C4 |
C3 |
H4 |
180.1 |
179.4 |
C3 |
C4 |
C5 |
C6 |
359.7 |
0.7 |
C3 |
C4 |
C5 |
H5 |
179.7 |
180.3 |
C1 |
C6 |
C5 |
C4 |
360.0 |
359.6 |
C3 |
C4 |
C5 |
H4 |
179.9 |
180.6 |
C6 |
C5 |
C4 |
H5 |
180.0 |
180.4 |
C4 |
C5 |
C6 |
H6 |
179.9 |
179.6 |
C3 |
C4 |
H4 |
C5 |
180.1 |
179.4 |
H4 |
C4 |
C5 |
C6 |
179.8 |
180.1 |
H4 |
C4 |
C5 |
H5 |
359.8 |
359.7 |
C5 |
C6 |
C1 |
H1 |
180.3 |
180.1 |
C1 |
C6 |
C5 |
H6 |
180.0 |
180.0 |
C6 |
C5 |
C4 |
H4 |
179.8 |
180.1 |
C4 |
C5 |
C6 |
H5 |
180.0 |
179.6 |
H5 |
C5 |
C4 |
H4 |
359.8 |
359.7 |
C4 |
C5 |
H5 |
C6 |
180.0 |
180.4 |
H5 |
C5 |
C6 |
H6 |
360.0 |
0.0 |
H6 |
C6 |
C1 |
H1 |
0.3 |
0.0 |
C1 |
C6 |
H6 |
C5 |
180.0 |
180.0 |
H6 |
C6 |
C5 |
H5 |
360.0 |
0.0 |
S1 |
C7 |
N1 |
H1N |
265.7 |
174.2 |
N1 |
C7 |
S1 |
N2 |
178.2 |
180.0 |
S1 |
C7 |
N2 |
H2N2 |
180.0 |
360.0 |
S1 |
C7 |
N2 |
H1N2 |
358.3 |
179.7 |