PDB Chemical Component URC
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for URC
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N1 |
C2 |
1.345 |
1.345 |
N1 |
C6 |
1.343 |
1.349 |
N1 |
HN1 |
1.020 |
0.970 |
C2 |
N3 |
1.338 |
1.346 |
C2 |
O11 |
1.221 |
1.217 |
C6 |
C5 |
1.488 |
1.408 |
C6 |
O13 |
1.223 |
1.219 |
N3 |
C4 |
1.332 |
1.375 |
N3 |
HN3 |
1.020 |
0.970 |
C4 |
C5 |
1.352 |
1.367 |
C4 |
N9 |
1.300 |
1.372 |
C5 |
N7 |
1.299 |
1.399 |
N9 |
C8 |
1.312 |
1.347 |
N9 |
HN9 |
1.020 |
0.970 |
N7 |
C8 |
1.312 |
1.347 |
N7 |
HN7 |
1.020 |
0.970 |
C8 |
O24 |
1.219 |
1.217 |
Bond Angles for URC
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
N1 |
C6 |
122.5 |
120.6 |
C2 |
N1 |
HN1 |
118.9 |
119.7 |
N1 |
C2 |
N3 |
121.1 |
121.3 |
N1 |
C2 |
O11 |
119.5 |
119.3 |
C6 |
N1 |
HN1 |
118.7 |
119.7 |
N1 |
C6 |
C5 |
116.0 |
119.3 |
N1 |
C6 |
O13 |
124.2 |
120.3 |
N3 |
C2 |
O11 |
119.4 |
119.4 |
C2 |
N3 |
C4 |
120.6 |
120.2 |
C2 |
N3 |
HN3 |
119.9 |
119.9 |
C5 |
C6 |
O13 |
119.8 |
120.4 |
C6 |
C5 |
C4 |
118.0 |
119.3 |
C6 |
C5 |
N7 |
134.6 |
133.5 |
C4 |
N3 |
HN3 |
119.5 |
119.9 |
N3 |
C4 |
C5 |
121.8 |
119.4 |
N3 |
C4 |
N9 |
132.6 |
133.1 |
C5 |
C4 |
N9 |
105.6 |
107.5 |
C4 |
C5 |
N7 |
107.4 |
107.2 |
C4 |
N9 |
C8 |
111.2 |
108.8 |
C4 |
N9 |
HN9 |
111.6 |
125.6 |
C5 |
N7 |
C8 |
110.1 |
107.6 |
C5 |
N7 |
HN7 |
124.5 |
126.2 |
C8 |
N9 |
HN9 |
111.6 |
125.6 |
N9 |
C8 |
N7 |
105.6 |
108.9 |
N9 |
C8 |
O24 |
127.1 |
125.5 |
C8 |
N7 |
HN7 |
125.3 |
126.2 |
N7 |
C8 |
O24 |
127.3 |
125.6 |
Torsion Angles for URC
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
N1 |
C2 |
HN1 |
180.0 |
180.0 |
C2 |
N1 |
C6 |
C5 |
359.9 |
360.0 |
C2 |
N1 |
C6 |
O13 |
179.8 |
180.0 |
N3 |
C2 |
N1 |
O11 |
179.8 |
180.3 |
N1 |
C2 |
N3 |
C4 |
359.9 |
359.5 |
N1 |
C2 |
N3 |
HN3 |
179.9 |
179.9 |
C2 |
N1 |
C6 |
HN1 |
180.0 |
180.0 |
C6 |
N1 |
C2 |
N3 |
0.1 |
0.3 |
C6 |
N1 |
C2 |
O11 |
180.2 |
180.0 |
C5 |
C6 |
N1 |
O13 |
180.1 |
180.0 |
N1 |
C6 |
C5 |
C4 |
0.1 |
-0.0 |
N1 |
C6 |
C5 |
N7 |
179.7 |
180.0 |
C2 |
N1 |
HN1 |
C6 |
180.0 |
180.0 |
HN1 |
N1 |
C2 |
N3 |
180.1 |
180.3 |
HN1 |
N1 |
C2 |
O11 |
0.2 |
360.0 |
HN1 |
N1 |
C6 |
C5 |
180.0 |
180.0 |
HN1 |
N1 |
C6 |
O13 |
359.9 |
360.0 |
N3 |
C2 |
N1 |
C6 |
0.1 |
0.3 |
N3 |
C2 |
N1 |
HN1 |
180.1 |
180.3 |
N1 |
C2 |
N3 |
O11 |
180.2 |
179.7 |
C4 |
N3 |
C2 |
HN3 |
180.0 |
179.6 |
C2 |
N3 |
C4 |
C5 |
0.2 |
0.4 |
C2 |
N3 |
C4 |
N9 |
180.1 |
180.2 |
O11 |
C2 |
N1 |
C6 |
180.2 |
180.0 |
O11 |
C2 |
N1 |
HN1 |
0.2 |
360.0 |
N1 |
C2 |
O11 |
N3 |
179.8 |
180.3 |
O11 |
C2 |
N3 |
C4 |
179.7 |
179.8 |
O11 |
C2 |
N3 |
HN3 |
359.7 |
0.2 |
C5 |
C6 |
N1 |
HN1 |
180.0 |
180.0 |
N1 |
C6 |
C5 |
O13 |
179.9 |
180.0 |
N3 |
C4 |
C5 |
C6 |
359.8 |
359.8 |
C6 |
C5 |
C4 |
N9 |
179.9 |
180.0 |
C4 |
C5 |
C6 |
N7 |
180.4 |
180.0 |
C6 |
C5 |
N7 |
C8 |
180.3 |
180.0 |
C6 |
C5 |
N7 |
HN7 |
0.3 |
-0.0 |
O13 |
C6 |
N1 |
HN1 |
359.9 |
-0.0 |
N1 |
C6 |
O13 |
C5 |
180.1 |
180.0 |
O13 |
C6 |
C5 |
C4 |
180.2 |
180.0 |
O13 |
C6 |
C5 |
N7 |
359.8 |
-0.0 |
C4 |
N3 |
C2 |
O11 |
179.7 |
179.8 |
C2 |
N3 |
C4 |
HN3 |
180.0 |
180.4 |
C6 |
C5 |
C4 |
N3 |
359.8 |
359.8 |
C5 |
C4 |
N3 |
N9 |
180.1 |
180.2 |
N3 |
C4 |
C5 |
N7 |
180.1 |
179.8 |
N3 |
C4 |
N9 |
C8 |
179.9 |
180.2 |
N3 |
C4 |
N9 |
HN9 |
54.6 |
0.2 |
HN3 |
N3 |
C2 |
O11 |
359.7 |
0.2 |
C2 |
N3 |
HN3 |
C4 |
180.0 |
179.6 |
HN3 |
N3 |
C4 |
C5 |
180.2 |
180.0 |
HN3 |
N3 |
C4 |
N9 |
0.1 |
359.7 |
C4 |
C5 |
C6 |
O13 |
180.2 |
180.0 |
C6 |
C5 |
C4 |
N7 |
179.7 |
180.0 |
C5 |
C4 |
N3 |
HN3 |
180.2 |
180.0 |
N3 |
C4 |
C5 |
N9 |
180.0 |
179.8 |
C5 |
C4 |
N9 |
C8 |
359.8 |
-0.0 |
C5 |
C4 |
N9 |
HN9 |
234.6 |
180.0 |
C4 |
C5 |
N7 |
C8 |
359.9 |
360.0 |
C4 |
C5 |
N7 |
HN7 |
179.9 |
180.0 |
N9 |
C4 |
N3 |
HN3 |
0.1 |
359.7 |
N3 |
C4 |
N9 |
C5 |
180.0 |
180.2 |
N9 |
C4 |
C5 |
N7 |
0.2 |
-0.0 |
C8 |
N9 |
C4 |
HN9 |
125.2 |
180.0 |
C4 |
N9 |
C8 |
N7 |
0.1 |
360.0 |
C4 |
N9 |
C8 |
O24 |
180.2 |
180.0 |
N7 |
C5 |
C6 |
O13 |
359.8 |
-0.0 |
C6 |
C5 |
N7 |
C4 |
180.4 |
180.0 |
N7 |
C5 |
C4 |
N9 |
0.2 |
-0.0 |
N9 |
C8 |
N7 |
C5 |
360.0 |
-0.0 |
C8 |
N7 |
C5 |
HN7 |
180.0 |
180.0 |
C5 |
N7 |
C8 |
O24 |
179.9 |
180.0 |
C4 |
N9 |
C8 |
HN9 |
234.7 |
180.0 |
C5 |
N7 |
C8 |
N9 |
360.0 |
-0.0 |
N9 |
C8 |
N7 |
HN7 |
180.0 |
180.0 |
N7 |
C8 |
N9 |
O24 |
180.0 |
180.0 |
C4 |
N9 |
HN9 |
C8 |
125.1 |
180.0 |
HN9 |
N9 |
C8 |
N7 |
125.4 |
180.0 |
HN9 |
N9 |
C8 |
O24 |
305.4 |
-0.0 |
C5 |
N7 |
C8 |
HN7 |
180.0 |
180.0 |
N7 |
C8 |
N9 |
HN9 |
125.4 |
180.0 |
N9 |
C8 |
N7 |
O24 |
180.0 |
180.0 |
C5 |
N7 |
HN7 |
C8 |
180.0 |
180.0 |
HN7 |
N7 |
C8 |
O24 |
359.9 |
-0.0 |
O24 |
C8 |
N9 |
HN9 |
305.4 |
-0.0 |
N9 |
C8 |
O24 |
N7 |
180.0 |
180.0 |
O24 |
C8 |
N7 |
HN7 |
359.9 |
-0.0 |