PDB Chemical Component UQ1
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for UQ1
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
O1 |
1.226 |
1.215 |
C1 |
C2 |
1.473 |
1.475 |
C1 |
C6 |
1.459 |
1.478 |
C2 |
O2 |
1.335 |
1.358 |
C2 |
C3 |
1.345 |
1.352 |
O2 |
CM2 |
1.451 |
1.428 |
CM2 |
HM21 |
1.114 |
1.090 |
CM2 |
HM22 |
1.115 |
1.090 |
CM2 |
HM23 |
1.115 |
1.089 |
C3 |
O3 |
1.346 |
1.357 |
C3 |
C4 |
1.476 |
1.476 |
O3 |
CM3 |
1.452 |
1.428 |
CM3 |
HM31 |
1.114 |
1.091 |
CM3 |
HM32 |
1.115 |
1.090 |
CM3 |
HM33 |
1.115 |
1.090 |
C4 |
O4 |
1.229 |
1.214 |
C4 |
C5 |
1.488 |
1.479 |
C5 |
CM5 |
1.496 |
1.506 |
C5 |
C6 |
1.338 |
1.338 |
CM5 |
HM51 |
1.115 |
1.090 |
CM5 |
HM52 |
1.115 |
1.090 |
CM5 |
HM53 |
1.115 |
1.090 |
C6 |
C7 |
1.498 |
1.507 |
C7 |
C8 |
1.536 |
1.506 |
C7 |
H71 |
1.115 |
1.089 |
C7 |
H72 |
1.116 |
1.090 |
C8 |
C9 |
1.341 |
1.309 |
C8 |
H8 |
1.104 |
1.080 |
C9 |
C10 |
1.521 |
1.507 |
C9 |
C11 |
1.535 |
1.506 |
C10 |
H101 |
1.115 |
1.089 |
C10 |
H102 |
1.114 |
1.090 |
C10 |
H103 |
1.115 |
1.089 |
C11 |
H111 |
1.115 |
1.091 |
C11 |
H112 |
1.115 |
1.090 |
C11 |
H113 |
1.115 |
1.089 |
Bond Angles for UQ1
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C1 |
C2 |
120.7 |
120.0 |
O1 |
C1 |
C6 |
119.0 |
120.0 |
C2 |
C1 |
C6 |
120.3 |
120.0 |
C1 |
C2 |
O2 |
114.9 |
120.1 |
C1 |
C2 |
C3 |
121.6 |
119.9 |
C1 |
C6 |
C5 |
119.7 |
120.2 |
C1 |
C6 |
C7 |
118.4 |
119.9 |
O2 |
C2 |
C3 |
123.5 |
120.0 |
C2 |
O2 |
CM2 |
120.3 |
106.8 |
C2 |
C3 |
O3 |
127.3 |
120.1 |
C2 |
C3 |
C4 |
117.5 |
119.9 |
O2 |
CM2 |
HM21 |
120.2 |
109.5 |
O2 |
CM2 |
HM22 |
108.3 |
109.4 |
O2 |
CM2 |
HM23 |
108.3 |
109.5 |
HM21 |
CM2 |
HM22 |
108.4 |
109.4 |
HM21 |
CM2 |
HM23 |
108.4 |
109.4 |
HM22 |
CM2 |
HM23 |
101.6 |
109.5 |
O3 |
C3 |
C4 |
115.2 |
120.0 |
C3 |
O3 |
CM3 |
122.8 |
106.8 |
C3 |
C4 |
O4 |
118.3 |
120.0 |
C3 |
C4 |
C5 |
121.1 |
120.0 |
O3 |
CM3 |
HM31 |
122.7 |
109.5 |
O3 |
CM3 |
HM32 |
107.5 |
109.5 |
O3 |
CM3 |
HM33 |
107.5 |
109.5 |
HM31 |
CM3 |
HM32 |
107.6 |
109.5 |
HM31 |
CM3 |
HM33 |
107.5 |
109.4 |
HM32 |
CM3 |
HM33 |
102.3 |
109.4 |
O4 |
C4 |
C5 |
120.6 |
120.0 |
C4 |
C5 |
CM5 |
120.6 |
119.9 |
C4 |
C5 |
C6 |
119.8 |
120.1 |
CM5 |
C5 |
C6 |
119.6 |
120.0 |
C5 |
CM5 |
HM51 |
120.6 |
109.5 |
C5 |
CM5 |
HM52 |
108.3 |
109.5 |
C5 |
CM5 |
HM53 |
108.3 |
109.5 |
C5 |
C6 |
C7 |
121.9 |
119.9 |
HM51 |
CM5 |
HM52 |
108.2 |
109.5 |
HM51 |
CM5 |
HM53 |
108.2 |
109.4 |
HM52 |
CM5 |
HM53 |
101.7 |
109.4 |
C6 |
C7 |
C8 |
111.2 |
109.5 |
C6 |
C7 |
H71 |
111.6 |
109.5 |
C6 |
C7 |
H72 |
111.6 |
109.5 |
C8 |
C7 |
H71 |
111.6 |
109.4 |
C8 |
C7 |
H72 |
111.5 |
109.5 |
C7 |
C8 |
C9 |
119.3 |
120.0 |
C7 |
C8 |
H8 |
127.0 |
120.0 |
H71 |
C7 |
H72 |
98.8 |
109.5 |
C9 |
C8 |
H8 |
113.7 |
120.0 |
C8 |
C9 |
C10 |
119.9 |
120.0 |
C8 |
C9 |
C11 |
120.5 |
120.0 |
C10 |
C9 |
C11 |
119.6 |
119.9 |
C9 |
C10 |
H101 |
119.9 |
109.5 |
C9 |
C10 |
H102 |
108.4 |
109.4 |
C9 |
C10 |
H103 |
108.5 |
109.5 |
C9 |
C11 |
H111 |
120.6 |
109.4 |
C9 |
C11 |
H112 |
108.3 |
109.5 |
C9 |
C11 |
H113 |
108.3 |
109.5 |
H101 |
C10 |
H102 |
108.5 |
109.5 |
H101 |
C10 |
H103 |
108.5 |
109.5 |
H102 |
C10 |
H103 |
101.6 |
109.4 |
H111 |
C11 |
H112 |
108.2 |
109.4 |
H111 |
C11 |
H113 |
108.2 |
109.5 |
H112 |
C11 |
H113 |
101.6 |
109.5 |
Torsion Angles for UQ1
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
O1 |
C6 |
180.7 |
179.9 |
O1 |
C1 |
C2 |
O2 |
359.4 |
0.0 |
O1 |
C1 |
C2 |
C3 |
179.0 |
180.0 |
O1 |
C1 |
C6 |
C5 |
180.2 |
179.9 |
O1 |
C1 |
C6 |
C7 |
1.6 |
360.0 |
O1 |
C1 |
C2 |
C6 |
179.3 |
180.1 |
C2 |
C1 |
C6 |
C5 |
359.5 |
360.0 |
C2 |
C1 |
C6 |
C7 |
180.9 |
180.0 |
O2 |
C2 |
C1 |
C3 |
180.5 |
180.0 |
C1 |
C2 |
O2 |
CM2 |
305.1 |
293.2 |
C1 |
C2 |
C3 |
O3 |
181.0 |
180.0 |
C1 |
C2 |
C3 |
C4 |
0.5 |
0.3 |
O1 |
C1 |
C6 |
C2 |
180.7 |
179.9 |
C6 |
C1 |
C2 |
O2 |
180.1 |
180.0 |
C6 |
C1 |
C2 |
C3 |
359.7 |
360.0 |
C4 |
C5 |
C6 |
C1 |
1.0 |
359.8 |
CM5 |
C5 |
C6 |
C1 |
180.4 |
180.0 |
C5 |
C6 |
C1 |
C7 |
178.7 |
180.0 |
C1 |
C6 |
C7 |
C8 |
244.1 |
270.0 |
C1 |
C6 |
C7 |
H71 |
9.4 |
30.0 |
C1 |
C6 |
C7 |
H72 |
118.9 |
150.0 |
O2 |
C2 |
C1 |
C6 |
180.1 |
180.0 |
C1 |
C2 |
O2 |
C3 |
179.5 |
180.0 |
O2 |
C2 |
C3 |
O3 |
0.5 |
0.1 |
O2 |
C2 |
C3 |
C4 |
180.0 |
180.3 |
C2 |
O2 |
CM2 |
HM21 |
180.0 |
176.2 |
C2 |
O2 |
CM2 |
HM22 |
305.3 |
296.1 |
C2 |
O2 |
CM2 |
HM23 |
54.7 |
56.2 |
C3 |
C2 |
C1 |
C6 |
359.7 |
360.0 |
C1 |
C2 |
C3 |
O2 |
180.5 |
180.0 |
C3 |
C2 |
O2 |
CM2 |
125.6 |
113.1 |
O3 |
C3 |
C2 |
C4 |
180.5 |
179.8 |
C2 |
C3 |
O3 |
CM3 |
350.0 |
113.1 |
C2 |
C3 |
C4 |
O4 |
179.4 |
180.0 |
C2 |
C3 |
C4 |
C5 |
360.0 |
359.5 |
CM2 |
O2 |
C2 |
C3 |
125.6 |
113.1 |
HM21 |
CM2 |
O2 |
HM22 |
234.7 |
240.0 |
HM21 |
CM2 |
O2 |
HM23 |
125.3 |
120.0 |
HM22 |
CM2 |
O2 |
HM23 |
250.6 |
239.9 |
O2 |
CM2 |
HM21 |
HM22 |
125.3 |
120.0 |
O2 |
CM2 |
HM21 |
HM23 |
234.8 |
240.0 |
HM22 |
CM2 |
HM21 |
HM23 |
109.5 |
120.0 |
O2 |
CM2 |
HM22 |
HM21 |
228.0 |
240.0 |
O2 |
CM2 |
HM22 |
HM23 |
113.9 |
120.0 |
HM21 |
CM2 |
HM22 |
HM23 |
245.9 |
240.0 |
O2 |
CM2 |
HM23 |
HM21 |
132.0 |
120.0 |
O2 |
CM2 |
HM23 |
HM22 |
246.0 |
240.0 |
HM21 |
CM2 |
HM23 |
HM22 |
114.1 |
120.0 |
C2 |
C3 |
O3 |
C4 |
179.6 |
180.2 |
O3 |
C3 |
C4 |
O4 |
359.0 |
0.2 |
O3 |
C3 |
C4 |
C5 |
179.6 |
179.7 |
C3 |
O3 |
CM3 |
HM31 |
180.0 |
176.2 |
C3 |
O3 |
CM3 |
HM32 |
305.3 |
296.2 |
C3 |
O3 |
CM3 |
HM33 |
54.8 |
56.2 |
C2 |
C3 |
C4 |
O3 |
180.4 |
179.8 |
C4 |
C3 |
O3 |
CM3 |
170.5 |
292.9 |
O4 |
C4 |
C3 |
C5 |
179.4 |
180.5 |
C3 |
C4 |
C5 |
CM5 |
179.8 |
180.2 |
C3 |
C4 |
C5 |
C6 |
359.2 |
0.5 |
CM3 |
O3 |
C3 |
C4 |
170.5 |
292.9 |
HM31 |
CM3 |
O3 |
HM32 |
234.7 |
240.0 |
HM31 |
CM3 |
O3 |
HM33 |
125.2 |
120.0 |
HM32 |
CM3 |
O3 |
HM33 |
250.5 |
240.0 |
O3 |
CM3 |
HM31 |
HM32 |
125.3 |
120.1 |
O3 |
CM3 |
HM31 |
HM33 |
234.8 |
240.0 |
HM32 |
CM3 |
HM31 |
HM33 |
109.5 |
119.9 |
O3 |
CM3 |
HM32 |
HM31 |
226.1 |
240.0 |
O3 |
CM3 |
HM32 |
HM33 |
113.0 |
120.0 |
HM31 |
CM3 |
HM32 |
HM33 |
246.9 |
240.1 |
O3 |
CM3 |
HM33 |
HM31 |
133.9 |
120.0 |
O3 |
CM3 |
HM33 |
HM32 |
247.0 |
239.9 |
HM31 |
CM3 |
HM33 |
HM32 |
113.1 |
119.9 |
C3 |
C4 |
O4 |
C5 |
180.6 |
179.5 |
O4 |
C4 |
C5 |
CM5 |
0.4 |
359.7 |
O4 |
C4 |
C5 |
C6 |
179.9 |
180.0 |
C1 |
C6 |
C5 |
C4 |
1.0 |
359.8 |
C3 |
C4 |
C5 |
O4 |
179.4 |
180.5 |
CM5 |
C5 |
C4 |
C6 |
180.6 |
179.8 |
C4 |
C5 |
CM5 |
HM51 |
180.0 |
0.3 |
C4 |
C5 |
CM5 |
HM52 |
305.3 |
120.3 |
C4 |
C5 |
CM5 |
HM53 |
54.7 |
240.3 |
C4 |
C5 |
C6 |
C7 |
179.6 |
179.7 |
C1 |
C6 |
C5 |
CM5 |
180.4 |
180.0 |
C4 |
C5 |
CM5 |
C6 |
179.4 |
180.2 |
CM5 |
C5 |
C6 |
C7 |
359.0 |
360.0 |
HM51 |
CM5 |
C5 |
HM52 |
234.7 |
240.0 |
HM51 |
CM5 |
C5 |
HM53 |
125.3 |
120.0 |
HM52 |
CM5 |
C5 |
HM53 |
250.5 |
240.0 |
C1 |
C6 |
C5 |
C7 |
181.4 |
180.0 |
C4 |
C5 |
C6 |
CM5 |
180.6 |
179.8 |
C6 |
C5 |
CM5 |
HM51 |
0.6 |
180.0 |
C6 |
C5 |
CM5 |
HM52 |
125.9 |
300.1 |
C6 |
C5 |
CM5 |
HM53 |
235.3 |
60.0 |
C5 |
C6 |
C7 |
C8 |
65.5 |
90.0 |
C5 |
C6 |
C7 |
H71 |
190.8 |
210.0 |
C5 |
C6 |
C7 |
H72 |
300.3 |
330.0 |
HM51 |
CM5 |
C5 |
C6 |
0.6 |
180.0 |
C5 |
CM5 |
HM51 |
HM52 |
125.3 |
120.0 |
C5 |
CM5 |
HM51 |
HM53 |
234.7 |
240.0 |
HM52 |
CM5 |
HM51 |
HM53 |
109.4 |
119.9 |
HM52 |
CM5 |
C5 |
C6 |
125.9 |
300.1 |
C5 |
CM5 |
HM52 |
HM51 |
227.7 |
239.9 |
C5 |
CM5 |
HM52 |
HM53 |
113.9 |
120.0 |
HM51 |
CM5 |
HM52 |
HM53 |
246.2 |
240.1 |
HM53 |
CM5 |
C5 |
C6 |
235.3 |
60.0 |
C5 |
CM5 |
HM53 |
HM51 |
132.3 |
120.1 |
C5 |
CM5 |
HM53 |
HM52 |
246.1 |
240.0 |
HM51 |
CM5 |
HM53 |
HM52 |
113.8 |
120.0 |
C1 |
C6 |
C7 |
C5 |
178.6 |
180.0 |
C8 |
C7 |
C6 |
H71 |
234.7 |
240.0 |
C8 |
C7 |
C6 |
H72 |
125.2 |
120.0 |
C6 |
C7 |
C8 |
C9 |
172.7 |
127.4 |
C6 |
C7 |
C8 |
H8 |
352.7 |
307.2 |
H71 |
C7 |
C6 |
H72 |
250.5 |
240.0 |
C6 |
C7 |
C8 |
H71 |
125.3 |
120.0 |
C6 |
C7 |
C8 |
H72 |
234.8 |
240.0 |
H71 |
C7 |
C8 |
H72 |
109.5 |
120.0 |
C9 |
C8 |
C7 |
H8 |
180.0 |
180.1 |
C7 |
C8 |
C9 |
C10 |
359.6 |
187.4 |
C7 |
C8 |
C9 |
C11 |
179.8 |
7.3 |
C6 |
C7 |
H71 |
C8 |
234.9 |
240.0 |
C6 |
C7 |
H71 |
H72 |
117.5 |
120.0 |
C8 |
C7 |
H71 |
H72 |
242.6 |
240.0 |
H71 |
C7 |
C8 |
C9 |
47.4 |
7.4 |
H71 |
C7 |
C8 |
H8 |
227.4 |
187.2 |
C6 |
C7 |
H72 |
C8 |
125.0 |
120.0 |
C6 |
C7 |
H72 |
H71 |
242.5 |
239.9 |
C8 |
C7 |
H72 |
H71 |
117.4 |
119.9 |
H72 |
C7 |
C8 |
C9 |
298.0 |
247.4 |
H72 |
C7 |
C8 |
H8 |
117.9 |
67.3 |
C9 |
C8 |
C7 |
H71 |
47.4 |
7.4 |
C9 |
C8 |
C7 |
H72 |
298.0 |
247.4 |
C7 |
C8 |
C9 |
H8 |
180.0 |
179.9 |
C10 |
C9 |
C8 |
C11 |
179.8 |
180.2 |
C8 |
C9 |
C10 |
H101 |
180.0 |
179.9 |
C8 |
C9 |
C10 |
H102 |
305.3 |
299.9 |
C8 |
C9 |
C10 |
H103 |
54.8 |
59.8 |
C8 |
C9 |
C11 |
H111 |
180.0 |
5.4 |
C8 |
C9 |
C11 |
H112 |
305.2 |
125.3 |
C8 |
C9 |
C11 |
H113 |
54.7 |
245.4 |
H8 |
C8 |
C7 |
H71 |
227.4 |
187.2 |
H8 |
C8 |
C7 |
H72 |
117.9 |
67.3 |
C7 |
C8 |
H8 |
C9 |
180.0 |
180.1 |
H8 |
C8 |
C9 |
C10 |
179.6 |
7.6 |
H8 |
C8 |
C9 |
C11 |
359.8 |
187.4 |
C10 |
C9 |
C8 |
H8 |
179.6 |
7.6 |
C8 |
C9 |
C10 |
C11 |
180.2 |
179.8 |
C10 |
C9 |
C11 |
H111 |
0.2 |
185.2 |
C10 |
C9 |
C11 |
H112 |
125.4 |
305.1 |
C10 |
C9 |
C11 |
H113 |
234.9 |
65.2 |
H101 |
C10 |
C9 |
H102 |
234.7 |
240.0 |
H101 |
C10 |
C9 |
H103 |
125.2 |
120.1 |
H102 |
C10 |
C9 |
H103 |
250.5 |
240.0 |
C11 |
C9 |
C8 |
H8 |
359.8 |
187.4 |
C8 |
C9 |
C11 |
C10 |
179.8 |
180.2 |
C11 |
C9 |
C10 |
H101 |
359.8 |
0.1 |
C11 |
C9 |
C10 |
H102 |
125.1 |
120.1 |
C11 |
C9 |
C10 |
H103 |
234.6 |
240.0 |
H111 |
C11 |
C9 |
H112 |
234.8 |
240.1 |
H111 |
C11 |
C9 |
H113 |
125.3 |
120.0 |
H112 |
C11 |
C9 |
H113 |
250.5 |
239.9 |
H101 |
C10 |
C9 |
C11 |
359.8 |
0.1 |
C9 |
C10 |
H101 |
H102 |
125.2 |
119.9 |
C9 |
C10 |
H101 |
H103 |
234.8 |
239.9 |
H102 |
C10 |
H101 |
H103 |
109.6 |
120.0 |
H102 |
C10 |
C9 |
C11 |
125.1 |
120.1 |
C9 |
C10 |
H102 |
H101 |
228.3 |
240.0 |
C9 |
C10 |
H102 |
H103 |
114.1 |
120.0 |
H101 |
C10 |
H102 |
H103 |
245.8 |
240.0 |
H103 |
C10 |
C9 |
C11 |
234.6 |
240.0 |
C9 |
C10 |
H103 |
H101 |
131.7 |
120.1 |
C9 |
C10 |
H103 |
H102 |
245.9 |
240.1 |
H101 |
C10 |
H103 |
H102 |
114.2 |
120.0 |
C9 |
C11 |
H111 |
H112 |
125.3 |
119.9 |
C9 |
C11 |
H111 |
H113 |
234.7 |
240.0 |
H112 |
C11 |
H111 |
H113 |
109.4 |
120.0 |
C9 |
C11 |
H112 |
H111 |
227.8 |
240.1 |
C9 |
C11 |
H112 |
H113 |
113.9 |
120.1 |
H111 |
C11 |
H112 |
H113 |
246.2 |
240.0 |
C9 |
C11 |
H113 |
H111 |
132.3 |
120.0 |
C9 |
C11 |
H113 |
H112 |
246.1 |
240.0 |
H111 |
C11 |
H113 |
H112 |
113.8 |
120.0 |