PDB Chemical Component UPX

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for UPX

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
OBB	NAB	1.411	1.317
NAB	OBC	1.390	1.316
NAB	CAJ	1.331	1.481
CAJ	CAI	1.397	1.377
CAJ	CAK	1.388	1.391
CAI	CAH	1.400	1.390
CAH	CAM	1.393	1.364
CAM	CAL	1.396	1.401
CAL	CAO	1.343	1.415
CAL	CAK	1.392	1.410
CAO	CAN	1.343	1.360
CAK	NAA	1.318	1.374
NAA	CAN	1.324	1.381
CAN	CAP	1.539	1.469
CAP	OBD	1.236	1.217
CAP	NAC	1.348	1.348
NAC	CAQ	1.353	1.380
CAQ	CAV	1.398	1.401
CAQ	CAR	1.381	1.401
CAV	CAU	1.394	1.359
CAU	CAT	1.400	1.415
CAR	CAS	1.403	1.359
CAS	CAT	1.398	1.415
CAT	CAW	1.404	1.406
CAW	CAX	1.539	1.507
CAW	NAD	1.338	1.331
NAD	NAE	1.245	1.290
NAE	CAY	1.348	1.345
CAY	NAF	1.335	1.371
CAY	NAG	1.327	1.331
NAF	CAZ	1.455	1.351
CAZ	CBA	1.511	1.392
CBA	NAG	1.463	1.320
CAI	HAI	1.080	1.080
CAH	HAH	1.080	1.080
CAM	HAM	1.081	1.080
CAO	HAO	1.080	1.081
NAA	HAA	1.000	0.971
NAC	HAC	1.000	0.970
CAV	HAV	1.080	1.080
CAR	HAR	1.080	1.080
CAU	HAU	1.080	1.080
CAS	HAS	1.080	1.080
CAX	HAX1	1.100	1.090
CAX	HAX2	1.100	1.090
CAX	HAX3	1.100	1.090
NAE	HAE	1.000	0.971
NAF	HAF	1.000	0.971
CAZ	HAZ	1.080	1.081
CBA	HBA	1.080	1.081

Bond Angles for UPX

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
OBB	NAB	OBC	116.6	120.0
OBB	NAB	CAJ	122.0	120.0
OBC	NAB	CAJ	121.3	120.0
NAB	CAJ	CAI	121.9	120.1
NAB	CAJ	CAK	118.7	120.1
CAI	CAJ	CAK	119.4	119.9
CAJ	CAI	CAH	119.4	120.6
CAJ	CAI	HAI	120.3	119.7
CAJ	CAK	CAL	121.6	119.4
CAJ	CAK	NAA	130.7	133.2
CAI	CAH	CAM	120.7	120.6
CAH	CAI	HAI	120.3	119.7
CAI	CAH	HAH	119.7	119.7
CAH	CAM	CAL	120.0	119.9
CAM	CAH	HAH	119.7	119.7
CAH	CAM	HAM	120.0	120.1
CAM	CAL	CAO	133.8	133.4
CAM	CAL	CAK	119.0	119.6
CAL	CAM	HAM	120.0	120.0
CAO	CAL	CAK	107.2	107.0
CAL	CAO	CAN	106.5	107.8
CAL	CAO	HAO	126.8	126.1
CAL	CAK	NAA	107.8	107.4
CAO	CAN	NAA	110.5	109.1
CAO	CAN	CAP	129.2	125.4
CAN	CAO	HAO	126.7	126.1
CAK	NAA	CAN	108.0	108.8
CAK	NAA	HAA	126.0	125.6
NAA	CAN	CAP	120.3	125.5
CAN	NAA	HAA	126.0	125.6
CAN	CAP	OBD	117.8	120.0
CAN	CAP	NAC	116.1	120.0
OBD	CAP	NAC	126.2	119.9
CAP	NAC	CAQ	127.0	120.1
CAP	NAC	HAC	116.5	119.9
NAC	CAQ	CAV	118.2	119.8
NAC	CAQ	CAR	123.8	119.8
CAQ	NAC	HAC	116.5	120.0
CAV	CAQ	CAR	117.9	120.4
CAQ	CAV	CAU	122.4	120.2
CAQ	CAV	HAV	118.8	120.0
CAQ	CAR	CAS	120.3	120.1
CAQ	CAR	HAR	119.9	120.0
CAV	CAU	CAT	119.7	119.8
CAU	CAV	HAV	118.8	119.9
CAV	CAU	HAU	120.1	120.1
CAU	CAT	CAS	117.8	119.7
CAU	CAT	CAW	120.8	120.1
CAT	CAU	HAU	120.1	120.1
CAR	CAS	CAT	121.9	119.8
CAS	CAR	HAR	119.9	119.9
CAR	CAS	HAS	119.0	120.1
CAS	CAT	CAW	121.4	120.1
CAT	CAS	HAS	119.1	120.1
CAT	CAW	CAX	121.7	120.0
CAT	CAW	NAD	118.9	120.0
CAX	CAW	NAD	119.4	120.0
CAW	CAX	HAX1	109.5	109.4
CAW	CAX	HAX2	109.4	109.5
CAW	CAX	HAX3	109.5	109.5
CAW	NAD	NAE	124.6	120.0
NAD	NAE	CAY	119.4	120.0
NAD	NAE	HAE	120.3	120.0
NAE	CAY	NAF	125.5	125.7
NAE	CAY	NAG	123.4	125.7
CAY	NAE	HAE	120.3	120.0
NAF	CAY	NAG	111.0	108.6
CAY	NAF	CAZ	111.1	107.2
CAY	NAF	HAF	124.5	126.4
CAY	NAG	CBA	110.7	109.2
NAF	CAZ	CBA	103.4	106.9
CAZ	NAF	HAF	124.5	126.4
NAF	CAZ	HAZ	128.3	126.5
CAZ	CBA	NAG	103.7	108.1
CBA	CAZ	HAZ	128.3	126.6
CAZ	CBA	HBA	128.2	126.0
NAG	CBA	HBA	128.1	126.0
HAX1	CAX	HAX2	109.5	109.4
HAX1	CAX	HAX3	109.5	109.4
HAX2	CAX	HAX3	109.5	109.5

Torsion Angles for UPX

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
OBC	NAB	OBB	CAJ	182.9	180.3
OBB	NAB	CAJ	CAI	180.9	360.0
OBB	NAB	CAJ	CAK	0.2	179.7
OBB	NAB	OBC	CAJ	177.1	179.7
OBC	NAB	CAJ	CAI	357.8	179.7
OBC	NAB	CAJ	CAK	177.1	359.4
OBB	NAB	CAJ	OBC	183.0	180.3
CAI	CAJ	NAB	CAK	180.7	180.3
NAB	CAJ	CAI	CAH	179.9	180.0
NAB	CAJ	CAI	HAI	359.9	360.0
NAB	CAJ	CAK	CAL	180.0	179.7
NAB	CAJ	CAK	NAA	360.0	0.1
NAB	CAJ	CAI	CAK	179.3	179.7
CAI	CAJ	CAK	CAL	359.4	359.5
CAI	CAJ	CAK	NAA	179.3	179.8
CAJ	CAI	CAH	CAM	359.9	360.0
CAH	CAI	CAJ	HAI	180.0	180.0
CAJ	CAI	CAH	HAH	179.9	180.0
NAB	CAJ	CAK	CAI	180.7	180.3
CAK	CAJ	CAI	CAH	0.6	0.3
CAK	CAJ	CAI	HAI	180.6	180.2
CAM	CAL	CAK	CAJ	0.1	0.5
CAO	CAL	CAK	CAJ	180.0	180.3
CAL	CAK	CAJ	NAA	180.1	179.7
CAJ	CAK	NAA	CAN	180.0	179.4
CAJ	CAK	NAA	HAA	0.0	359.9
CAH	CAI	CAJ	CAK	0.6	0.3
CAJ	CAI	CAH	HAI	180.0	180.0
CAI	CAH	CAM	CAL	359.6	0.0
CAM	CAH	CAI	HAH	180.0	180.0
CAI	CAH	CAM	HAM	179.6	180.0
CAM	CAH	CAI	HAI	180.0	180.0
CAI	CAH	CAM	HAH	180.0	180.0
CAH	CAM	CAL	CAO	180.6	180.0
CAH	CAM	CAL	CAK	0.4	359.7
CAL	CAM	CAH	HAM	180.0	180.0
CAJ	CAK	CAL	CAM	0.1	0.5
CAL	CAM	CAH	HAH	179.6	180.0
CAH	CAM	CAL	HAM	180.0	180.0
CAO	CAL	CAM	CAK	180.2	180.3
CAM	CAL	CAO	CAN	179.8	180.0
CAM	CAL	CAO	HAO	359.8	360.0
CAM	CAL	CAK	NAA	180.2	180.3
CAJ	CAK	CAL	CAO	180.0	180.3
CAM	CAL	CAO	CAK	179.8	179.8
CAO	CAL	CAM	HAM	0.6	360.0
CAO	CAL	CAK	NAA	0.0	0.1
CAL	CAO	CAN	NAA	0.0	359.6
CAL	CAO	CAN	CAP	179.3	180.0
CAN	CAO	CAL	HAO	180.0	180.0
CAJ	CAK	CAL	NAA	179.9	180.2
CAM	CAL	CAK	CAO	180.1	180.2
CAK	CAL	CAM	HAM	180.4	179.7
CAK	CAL	CAO	CAN	359.9	0.2
CAK	CAL	CAO	HAO	180.0	180.2
CAL	CAK	NAA	CAN	360.0	359.7
CAL	CAK	NAA	HAA	179.9	180.2
CAN	CAO	CAL	CAK	359.9	0.2
CAL	CAO	CAN	HAO	180.0	180.0
CAK	NAA	CAN	CAO	360.0	0.5
NAA	CAN	CAO	CAP	180.7	179.6
CAO	CAN	NAA	HAA	180.0	180.0
CAO	CAN	CAP	OBD	183.1	0.0
CAO	CAN	CAP	NAC	3.2	180.1
CAJ	CAK	NAA	CAL	180.1	179.7
CAO	CAN	NAA	CAK	360.0	0.5
CAK	NAA	CAN	CAP	180.6	180.1
CAN	NAA	CAK	HAA	180.0	179.5
CAO	CAN	NAA	CAP	179.4	180.4
NAA	CAN	CAO	HAO	180.0	179.6
CAK	NAA	CAN	HAA	180.0	180.5
NAA	CAN	CAP	OBD	2.4	180.5
NAA	CAN	CAP	NAC	182.5	0.5
CAO	CAN	CAP	NAA	180.8	179.5
CAP	CAN	CAO	HAO	359.3	360.0
CAP	CAN	NAA	HAA	0.6	359.6
OBD	CAP	CAN	NAC	179.9	180.0
CAN	CAP	NAC	CAQ	183.9	174.7
CAN	CAP	NAC	HAC	3.9	354.7
CAN	CAP	OBD	NAC	180.1	180.0
OBD	CAP	NAC	CAQ	4.0	354.7
OBD	CAP	NAC	HAC	184.0	174.8
CAN	CAP	NAC	OBD	179.9	180.0
CAP	NAC	CAQ	CAV	175.3	146.2
CAP	NAC	CAQ	CAR	357.6	326.0
CAQ	NAC	CAP	HAC	180.0	179.9
CAP	NAC	CAQ	HAC	180.0	180.1
CAV	CAQ	NAC	CAR	177.7	180.2
NAC	CAQ	CAV	CAU	181.8	180.1
NAC	CAQ	CAV	HAV	1.8	360.0
NAC	CAQ	CAR	CAS	178.2	179.9
NAC	CAQ	CAR	HAR	358.3	360.0
NAC	CAQ	CAV	CAR	182.2	179.8
CAV	CAQ	NAC	HAC	355.3	326.1
CAV	CAQ	CAR	CAS	0.5	359.7
CAV	CAQ	CAR	HAR	180.6	179.8
CAQ	CAV	CAU	CAT	359.6	359.9
CAU	CAV	CAQ	HAV	180.0	180.1
CAQ	CAV	CAU	HAU	179.5	180.0
NAC	CAQ	CAR	CAV	177.7	180.2
CAR	CAQ	NAC	HAC	177.6	145.9
CAR	CAQ	CAV	CAU	359.6	0.3
CAR	CAQ	CAV	HAV	179.6	180.2
CAQ	CAR	CAS	CAT	0.0	0.0
CAS	CAR	CAQ	HAR	180.0	180.0
CAQ	CAR	CAS	HAS	180.0	180.0
CAU	CAV	CAQ	CAR	359.6	0.3
CAQ	CAV	CAU	HAV	180.0	179.9
CAV	CAU	CAT	CAS	1.0	359.8
CAV	CAU	CAT	CAW	180.2	180.0
CAT	CAU	CAV	HAU	180.0	179.9
CAT	CAU	CAV	HAV	179.6	180.0
CAV	CAU	CAT	HAU	180.0	180.1
CAR	CAS	CAT	CAU	359.2	0.2
CAS	CAT	CAU	CAW	180.7	179.8
CAU	CAT	CAS	HAS	179.2	180.2
CAU	CAT	CAW	CAX	158.1	180.0
CAU	CAT	CAW	NAD	335.8	0.1
CAQ	CAR	CAS	HAR	180.0	180.0
CAU	CAT	CAS	CAR	359.2	0.2
CAR	CAS	CAT	CAW	179.9	180.0
CAT	CAS	CAR	HAS	180.0	180.0
CAU	CAT	CAS	CAW	179.2	180.2
CAS	CAT	CAU	HAU	181.0	179.7
CAT	CAS	CAR	HAR	180.0	180.0
CAR	CAS	CAT	HAS	180.0	180.0
CAS	CAT	CAW	CAX	337.3	0.2
CAS	CAT	CAW	NAD	155.1	180.3
CAU	CAT	CAW	CAS	180.8	179.8
CAW	CAT	CAU	HAU	0.3	359.9
CAW	CAT	CAS	HAS	359.9	0.0
CAX	CAW	CAT	NAD	182.2	179.9
CAT	CAW	CAX	HAX1	180.0	90.1
CAT	CAW	CAX	HAX2	300.0	210.0
CAT	CAW	CAX	HAX3	60.0	330.1
CAT	CAW	NAD	NAE	178.4	180.0
CAT	CAW	CAX	NAD	177.7	180.1
CAX	CAW	NAD	NAE	356.2	0.1
HAX1	CAX	CAW	HAX2	240.0	240.0
HAX1	CAX	CAW	HAX3	120.0	120.0
HAX2	CAX	CAW	HAX3	240.0	239.9
CAT	CAW	NAD	CAX	182.2	179.9
NAD	CAW	CAX	HAX1	2.2	270.0
NAD	CAW	CAX	HAX2	122.3	29.9
NAD	CAW	CAX	HAX3	242.2	150.0
CAW	NAD	NAE	CAY	178.9	179.9
CAW	NAD	NAE	HAE	358.9	359.9
NAD	NAE	CAY	NAF	182.4	180.0
NAD	NAE	CAY	NAG	0.4	359.7
CAY	NAE	NAD	HAE	180.0	180.0
NAD	NAE	CAY	HAE	180.0	180.0
NAF	CAY	NAE	NAG	182.1	180.3
NAE	CAY	NAF	CAZ	181.3	180.0
NAE	CAY	NAF	HAF	1.3	360.0
NAE	CAY	NAG	CBA	178.2	179.8
NAE	CAY	NAF	NAG	178.2	179.8
NAF	CAY	NAE	HAE	2.4	360.0
NAF	CAY	NAG	CBA	356.4	359.6
CAY	NAF	CAZ	CBA	358.7	360.0
CAZ	NAF	CAY	HAF	180.0	180.1
CAY	NAF	CAZ	HAZ	178.7	180.0
NAE	CAY	NAG	NAF	181.8	180.2
NAG	CAY	NAE	HAE	180.4	179.7
NAG	CAY	NAF	CAZ	3.1	0.3
NAG	CAY	NAF	HAF	183.1	180.2
CAZ	CBA	NAG	CAY	2.6	0.4
CAY	NAG	CBA	HBA	182.6	180.2
CAZ	NAF	CAY	NAG	3.1	0.3
CAY	NAF	CAZ	HAF	180.0	179.9
NAF	CAZ	CBA	NAG	359.3	359.8
CBA	CAZ	NAF	HAZ	180.0	179.9
NAF	CAZ	CBA	HBA	179.3	180.0
CAY	NAG	CBA	CAZ	2.6	0.4
CBA	CAZ	NAF	HAF	178.7	180.0
NAF	CAZ	CBA	HAZ	180.0	180.1
NAG	CBA	CAZ	HBA	180.0	179.8
NAG	CBA	CAZ	HAZ	179.3	179.7
CAZ	CBA	NAG	HBA	180.0	180.2
HAI	CAI	CAJ	CAK	180.6	180.2
CAJ	CAI	HAI	CAH	180.0	180.0
HAI	CAI	CAH	CAM	180.0	180.0
HAI	CAI	CAH	HAH	360.0	0.0
CAI	CAH	HAH	CAM	180.0	180.0
HAH	CAH	CAI	HAI	360.0	0.0
HAH	CAH	CAM	CAL	179.6	180.0
HAH	CAH	CAM	HAM	359.6	0.0
CAH	CAM	HAM	CAL	180.0	180.0
HAM	CAM	CAH	HAH	359.6	0.0
HAM	CAM	CAL	CAO	0.6	360.0
HAM	CAM	CAL	CAK	180.4	179.7
HAO	CAO	CAL	CAK	180.0	180.2
CAL	CAO	HAO	CAN	180.0	180.0
HAO	CAO	CAN	NAA	180.0	179.6
HAO	CAO	CAN	CAP	359.3	360.0
CAK	NAA	HAA	CAN	180.0	179.4
HAA	NAA	CAN	CAP	0.6	359.6
CAP	NAC	HAC	CAQ	180.0	179.9
HAC	NAC	CAQ	CAV	355.3	326.1
HAC	NAC	CAQ	CAR	177.6	145.9
HAV	CAV	CAQ	CAR	179.6	180.2
CAQ	CAV	HAV	CAU	180.0	180.1
HAV	CAV	CAU	CAT	179.6	180.0
HAV	CAV	CAU	HAU	359.5	0.1
CAQ	CAR	HAR	CAS	180.0	180.0
HAR	CAR	CAS	CAT	180.0	180.0
HAR	CAR	CAS	HAS	0.0	360.0
CAV	CAU	HAU	CAT	180.0	179.9
HAU	CAU	CAV	HAV	359.5	0.1
HAU	CAU	CAT	CAS	181.0	179.7
HAU	CAU	CAT	CAW	0.3	359.9
CAR	CAS	HAS	CAT	180.0	180.0
HAS	CAS	CAR	HAR	0.0	360.0
HAS	CAS	CAT	CAW	359.9	0.0
HAX1	CAX	CAW	NAD	2.2	270.0
CAW	CAX	HAX1	HAX2	120.0	120.0
CAW	CAX	HAX1	HAX3	240.0	240.0
HAX2	CAX	HAX1	HAX3	120.0	120.0
HAX2	CAX	CAW	NAD	122.3	29.9
CAW	CAX	HAX2	HAX1	240.0	240.0
CAW	CAX	HAX2	HAX3	120.0	120.1
HAX1	CAX	HAX2	HAX3	240.0	240.0
HAX3	CAX	CAW	NAD	242.2	150.0
CAW	CAX	HAX3	HAX1	120.0	120.0
CAW	CAX	HAX3	HAX2	240.0	239.9
HAX1	CAX	HAX3	HAX2	120.0	119.9
NAD	NAE	HAE	CAY	180.0	180.0
HAE	NAE	CAY	NAF	2.4	360.0
HAE	NAE	CAY	NAG	180.4	179.7
HAF	NAF	CAY	NAG	183.1	180.2
CAY	NAF	HAF	CAZ	180.0	180.1
HAF	NAF	CAZ	CBA	178.7	180.0
HAF	NAF	CAZ	HAZ	358.7	0.1
NAF	CAZ	HAZ	CBA	180.0	179.9
HAZ	CAZ	NAF	HAF	358.7	0.1
HAZ	CAZ	CBA	NAG	179.3	179.7
HAZ	CAZ	CBA	HBA	359.2	359.9
CAZ	CBA	HBA	NAG	180.0	179.8
HBA	CBA	CAZ	HAZ	359.2	359.9