PDB Chemical Component UN1
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for UN1
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C1' |
O1' |
1.250 |
1.208 |
| C1' |
O2' |
1.252 |
1.342 |
| C1' |
C1 |
1.509 |
1.507 |
| O2' |
H2' |
0.950 |
0.967 |
| O |
C |
1.233 |
1.207 |
| C1 |
C6 |
1.520 |
1.530 |
| C1 |
H1C1 |
1.115 |
1.090 |
| C1 |
H1C2 |
1.115 |
1.089 |
| C |
CA |
1.561 |
1.507 |
| C |
OXT |
1.340 |
1.342 |
| CA |
C5 |
1.536 |
1.529 |
| CA |
N |
1.441 |
1.469 |
| CA |
HA |
1.115 |
1.091 |
| C5 |
C6 |
1.497 |
1.529 |
| C5 |
H5C1 |
1.116 |
1.090 |
| C5 |
H5C2 |
1.115 |
1.090 |
| C6 |
H6C1 |
1.115 |
1.090 |
| C6 |
H6C2 |
1.115 |
1.090 |
| N |
H |
1.020 |
1.008 |
| N |
H2 |
1.020 |
1.009 |
| OXT |
HXT |
0.950 |
0.967 |
Bond Angles for UN1
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O1' |
C1' |
O2' |
126.7 |
120.0 |
| O1' |
C1' |
C1 |
115.7 |
120.0 |
| O2' |
C1' |
C1 |
117.7 |
120.0 |
| C1' |
O2' |
H2' |
126.7 |
120.1 |
| C1' |
C1 |
C6 |
107.6 |
109.5 |
| C1' |
C1 |
H1C1 |
112.9 |
109.4 |
| C1' |
C1 |
H1C2 |
112.9 |
109.5 |
| O |
C |
CA |
119.1 |
120.0 |
| O |
C |
OXT |
122.4 |
120.0 |
| C6 |
C1 |
H1C1 |
112.9 |
109.5 |
| C6 |
C1 |
H1C2 |
112.9 |
109.4 |
| C1 |
C6 |
C5 |
110.4 |
109.5 |
| C1 |
C6 |
H6C1 |
111.9 |
109.4 |
| C1 |
C6 |
H6C2 |
111.9 |
109.5 |
| H1C1 |
C1 |
H1C2 |
97.6 |
109.5 |
| CA |
C |
OXT |
118.4 |
120.0 |
| C |
CA |
C5 |
112.5 |
109.5 |
| C |
CA |
N |
103.5 |
109.5 |
| C |
CA |
HA |
111.7 |
109.5 |
| C |
OXT |
HXT |
122.4 |
120.0 |
| C5 |
CA |
N |
105.3 |
109.5 |
| C5 |
CA |
HA |
111.7 |
109.4 |
| CA |
C5 |
C6 |
112.8 |
109.5 |
| CA |
C5 |
H5C1 |
111.0 |
109.5 |
| CA |
C5 |
H5C2 |
111.0 |
109.5 |
| N |
CA |
HA |
111.7 |
109.4 |
| CA |
N |
H |
105.7 |
106.6 |
| CA |
N |
H2 |
105.7 |
106.7 |
| C6 |
C5 |
H5C1 |
111.0 |
109.5 |
| C6 |
C5 |
H5C2 |
111.0 |
109.5 |
| C5 |
C6 |
H6C1 |
111.9 |
109.5 |
| C5 |
C6 |
H6C2 |
111.9 |
109.5 |
| H5C1 |
C5 |
H5C2 |
99.3 |
109.4 |
| H6C1 |
C6 |
H6C2 |
98.5 |
109.4 |
| H |
N |
H2 |
103.6 |
106.7 |
Torsion Angles for UN1
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O2' |
C1' |
O1' |
C1 |
179.9 |
179.9 |
| O1' |
C1' |
O2' |
H2' |
180.0 |
360.0 |
| O1' |
C1' |
C1 |
C6 |
331.2 |
360.0 |
| O1' |
C1' |
C1 |
H1C1 |
96.5 |
240.0 |
| O1' |
C1' |
C1 |
H1C2 |
206.0 |
120.0 |
| O1' |
C1' |
O2' |
C1 |
180.1 |
180.1 |
| O2' |
C1' |
C1 |
C6 |
151.3 |
180.0 |
| O2' |
C1' |
C1 |
H1C1 |
276.6 |
60.0 |
| O2' |
C1' |
C1 |
H1C2 |
26.1 |
300.0 |
| O1' |
C1' |
C1 |
O2' |
179.9 |
179.9 |
| C1 |
C1' |
O2' |
H2' |
360.0 |
179.9 |
| C6 |
C1 |
C1' |
H1C1 |
234.7 |
120.0 |
| C6 |
C1 |
C1' |
H1C2 |
125.2 |
240.0 |
| C1' |
C1 |
C6 |
C5 |
155.8 |
180.0 |
| C1' |
C1 |
C6 |
H6C1 |
281.1 |
60.0 |
| C1' |
C1 |
C6 |
H6C2 |
30.6 |
300.1 |
| H1C1 |
C1 |
C1' |
H1C2 |
250.5 |
120.0 |
| H2' |
O2' |
C1' |
C1 |
360.0 |
179.9 |
| CA |
C |
O |
OXT |
182.1 |
180.0 |
| O |
C |
CA |
C5 |
149.8 |
90.0 |
| O |
C |
CA |
N |
36.7 |
329.9 |
| O |
C |
CA |
HA |
276.4 |
210.0 |
| O |
C |
OXT |
HXT |
180.0 |
360.0 |
| C1' |
C1 |
C6 |
H1C1 |
125.3 |
240.0 |
| C1' |
C1 |
C6 |
H1C2 |
234.8 |
120.0 |
| H1C1 |
C1 |
C6 |
H1C2 |
109.5 |
240.0 |
| CA |
C5 |
C6 |
C1 |
190.7 |
180.0 |
| C1 |
C6 |
C5 |
H5C1 |
315.9 |
60.0 |
| C1 |
C6 |
C5 |
H5C2 |
65.4 |
300.0 |
| C5 |
C6 |
C1 |
H6C1 |
234.7 |
120.0 |
| C5 |
C6 |
C1 |
H6C2 |
125.3 |
240.0 |
| H6C1 |
C6 |
C1 |
H6C2 |
250.5 |
119.9 |
| C1' |
C1 |
H1C1 |
C6 |
237.6 |
120.0 |
| C1' |
C1 |
H1C1 |
H1C2 |
118.8 |
240.0 |
| C6 |
C1 |
H1C1 |
H1C2 |
241.2 |
120.0 |
| H1C1 |
C1 |
C6 |
C5 |
30.6 |
300.0 |
| H1C1 |
C1 |
C6 |
H6C1 |
155.8 |
180.0 |
| H1C1 |
C1 |
C6 |
H6C2 |
265.3 |
60.0 |
| C1' |
C1 |
H1C2 |
C6 |
122.3 |
240.0 |
| C1' |
C1 |
H1C2 |
H1C1 |
241.2 |
120.0 |
| C6 |
C1 |
H1C2 |
H1C1 |
118.8 |
240.0 |
| H1C2 |
C1 |
C6 |
C5 |
281.1 |
60.0 |
| H1C2 |
C1 |
C6 |
H6C1 |
46.4 |
299.9 |
| H1C2 |
C1 |
C6 |
H6C2 |
155.8 |
180.0 |
| O |
C |
CA |
OXT |
178.0 |
180.0 |
| CA |
C |
OXT |
HXT |
357.9 |
179.9 |
| C5 |
CA |
C |
N |
113.1 |
120.1 |
| C5 |
CA |
C |
HA |
233.4 |
240.0 |
| C |
CA |
C5 |
C6 |
59.6 |
180.0 |
| C |
CA |
C5 |
H5C1 |
294.3 |
300.0 |
| C |
CA |
C5 |
H5C2 |
184.8 |
59.9 |
| N |
CA |
C |
HA |
120.3 |
119.9 |
| C |
CA |
N |
H |
24.3 |
60.1 |
| C |
CA |
N |
H2 |
274.9 |
173.8 |
| O |
C |
OXT |
CA |
182.1 |
180.0 |
| OXT |
C |
CA |
C5 |
331.9 |
270.0 |
| OXT |
C |
CA |
N |
218.8 |
150.0 |
| OXT |
C |
CA |
HA |
98.4 |
30.0 |
| C1 |
C6 |
C5 |
CA |
190.7 |
180.0 |
| C5 |
CA |
C |
OXT |
331.9 |
270.0 |
| C |
CA |
C5 |
N |
248.0 |
239.9 |
| C |
CA |
C5 |
HA |
126.6 |
120.0 |
| N |
CA |
C5 |
HA |
238.6 |
240.1 |
| C5 |
CA |
N |
H |
266.0 |
300.0 |
| C5 |
CA |
N |
H2 |
156.6 |
53.7 |
| C6 |
C5 |
CA |
H5C1 |
125.3 |
240.0 |
| C6 |
C5 |
CA |
H5C2 |
234.7 |
120.0 |
| CA |
C5 |
C6 |
H6C1 |
65.4 |
300.0 |
| CA |
C5 |
C6 |
H6C2 |
316.0 |
60.0 |
| H5C1 |
C5 |
CA |
H5C2 |
109.5 |
240.1 |
| N |
CA |
C |
OXT |
218.8 |
150.0 |
| C |
CA |
N |
C5 |
118.2 |
120.1 |
| C |
CA |
N |
HA |
239.7 |
240.0 |
| C5 |
CA |
N |
HA |
121.4 |
119.9 |
| N |
CA |
C5 |
C6 |
171.6 |
300.1 |
| N |
CA |
C5 |
H5C1 |
46.3 |
60.1 |
| N |
CA |
C5 |
H5C2 |
296.8 |
180.0 |
| H |
N |
CA |
H2 |
109.4 |
246.3 |
| HA |
CA |
C |
OXT |
98.4 |
30.0 |
| C |
CA |
HA |
C5 |
233.0 |
239.9 |
| C |
CA |
HA |
N |
115.4 |
120.0 |
| C5 |
CA |
HA |
N |
242.4 |
240.0 |
| HA |
CA |
C5 |
C6 |
293.0 |
60.0 |
| HA |
CA |
C5 |
H5C1 |
167.7 |
180.0 |
| HA |
CA |
C5 |
H5C2 |
58.3 |
299.9 |
| HA |
CA |
N |
H |
144.6 |
180.0 |
| HA |
CA |
N |
H2 |
35.2 |
293.8 |
| C5 |
C6 |
C1 |
H1C1 |
30.6 |
300.0 |
| C5 |
C6 |
C1 |
H1C2 |
281.1 |
60.0 |
| C1 |
C6 |
C5 |
H6C1 |
125.3 |
240.0 |
| C1 |
C6 |
C5 |
H6C2 |
234.7 |
120.0 |
| C6 |
C5 |
CA |
N |
171.6 |
300.1 |
| C6 |
C5 |
CA |
HA |
293.0 |
60.0 |
| CA |
C5 |
C6 |
H5C1 |
234.7 |
120.0 |
| CA |
C5 |
C6 |
H5C2 |
125.2 |
240.0 |
| H5C1 |
C5 |
C6 |
H5C2 |
250.5 |
120.0 |
| H6C1 |
C6 |
C5 |
H6C2 |
109.4 |
240.0 |
| H5C1 |
C5 |
CA |
N |
46.3 |
60.1 |
| H5C1 |
C5 |
CA |
HA |
167.7 |
180.0 |
| CA |
C5 |
H5C1 |
C6 |
126.2 |
240.0 |
| CA |
C5 |
H5C1 |
H5C2 |
243.1 |
120.0 |
| C6 |
C5 |
H5C1 |
H5C2 |
116.9 |
240.0 |
| H5C1 |
C5 |
C6 |
H6C1 |
190.7 |
180.0 |
| H5C1 |
C5 |
C6 |
H6C2 |
81.2 |
300.0 |
| H5C2 |
C5 |
CA |
N |
296.8 |
180.0 |
| H5C2 |
C5 |
CA |
HA |
58.3 |
299.9 |
| CA |
C5 |
H5C2 |
C6 |
233.8 |
120.1 |
| CA |
C5 |
H5C2 |
H5C1 |
116.9 |
240.0 |
| C6 |
C5 |
H5C2 |
H5C1 |
243.1 |
120.0 |
| H5C2 |
C5 |
C6 |
H6C1 |
300.1 |
60.0 |
| H5C2 |
C5 |
C6 |
H6C2 |
190.7 |
180.0 |
| H6C1 |
C6 |
C1 |
H1C1 |
155.8 |
180.0 |
| H6C1 |
C6 |
C1 |
H1C2 |
46.4 |
299.9 |
| C1 |
C6 |
H6C1 |
C5 |
235.6 |
120.1 |
| C1 |
C6 |
H6C1 |
H6C2 |
117.8 |
240.1 |
| H6C1 |
C6 |
C5 |
H5C1 |
190.7 |
180.0 |
| H6C1 |
C6 |
C5 |
H5C2 |
300.1 |
60.0 |
| C5 |
C6 |
H6C1 |
H6C2 |
242.2 |
120.0 |
| H6C2 |
C6 |
C1 |
H1C1 |
265.3 |
60.0 |
| H6C2 |
C6 |
C1 |
H1C2 |
155.8 |
180.0 |
| C1 |
C6 |
H6C2 |
C5 |
124.4 |
240.0 |
| C1 |
C6 |
H6C2 |
H6C1 |
242.2 |
119.9 |
| H6C2 |
C6 |
C5 |
H5C1 |
81.2 |
300.0 |
| H6C2 |
C6 |
C5 |
H5C2 |
190.7 |
180.0 |
| C5 |
C6 |
H6C2 |
H6C1 |
117.8 |
240.0 |
| H |
N |
CA |
HA |
144.6 |
180.0 |
| CA |
N |
H |
H2 |
249.1 |
113.7 |
| H2 |
N |
CA |
HA |
35.2 |
293.8 |
| CA |
N |
H2 |
H |
110.9 |
246.3 |