PDB Chemical Component UFZ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for UFZ
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
C |
1.487 |
1.469 |
| C |
C1 |
1.504 |
1.506 |
| C1 |
C6 |
1.377 |
1.383 |
| C1 |
C2 |
1.376 |
1.382 |
| C6 |
C5 |
1.382 |
1.382 |
| C2 |
C3 |
1.382 |
1.383 |
| C5 |
C4 |
1.371 |
1.383 |
| C3 |
C4 |
1.353 |
1.382 |
| N |
HN3 |
1.000 |
1.010 |
| N |
HN1 |
1.000 |
1.009 |
| N |
HN2 |
1.000 |
1.009 |
| C |
H1 |
1.100 |
1.090 |
| C |
H2A |
1.100 |
1.090 |
| C2 |
H2 |
1.080 |
1.080 |
| C3 |
H3 |
1.080 |
1.080 |
| C4 |
H4 |
1.080 |
1.080 |
| C5 |
H5 |
1.080 |
1.080 |
| C6 |
H6 |
1.081 |
1.080 |
Bond Angles for UFZ
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N |
C |
C1 |
111.9 |
109.5 |
| C |
N |
HN3 |
109.5 |
109.5 |
| C |
N |
HN1 |
109.4 |
109.5 |
| C |
N |
HN2 |
109.5 |
109.5 |
| N |
C |
H1 |
108.9 |
109.5 |
| N |
C |
H2A |
108.9 |
109.4 |
| C |
C1 |
C6 |
121.3 |
120.0 |
| C |
C1 |
C2 |
120.6 |
120.1 |
| C1 |
C |
H1 |
108.9 |
109.5 |
| C1 |
C |
H2A |
108.9 |
109.5 |
| C2 |
C1 |
C6 |
118.1 |
119.9 |
| C1 |
C6 |
C5 |
120.5 |
120.0 |
| C1 |
C6 |
H6 |
119.8 |
120.0 |
| C1 |
C2 |
C3 |
121.2 |
120.1 |
| C1 |
C2 |
H2 |
119.4 |
120.0 |
| C6 |
C5 |
H5 |
119.8 |
120.0 |
| C2 |
C3 |
C4 |
120.1 |
120.0 |
| C3 |
C2 |
H2 |
119.4 |
120.0 |
| C2 |
C3 |
H3 |
119.9 |
120.0 |
| C5 |
C4 |
H4 |
120.2 |
120.0 |
| C4 |
C3 |
H3 |
119.9 |
120.0 |
| C3 |
C4 |
H4 |
120.1 |
120.0 |
| HN3 |
N |
HN1 |
109.5 |
109.5 |
| HN3 |
N |
HN2 |
109.5 |
109.5 |
| HN1 |
N |
HN2 |
109.5 |
109.5 |
| H1 |
C |
H2A |
109.5 |
109.5 |
Torsion Angles for UFZ
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N |
C |
C1 |
C6 |
301.7 |
90.0 |
| N |
C |
C1 |
C2 |
123.2 |
270.3 |
| C1 |
C |
N |
H1 |
239.6 |
240.0 |
| C1 |
C |
N |
H2A |
120.4 |
120.0 |
| HN3 |
N |
C |
HN1 |
240.0 |
240.0 |
| HN3 |
N |
C |
HN2 |
120.0 |
120.0 |
| HN1 |
N |
C |
HN2 |
240.0 |
240.0 |
| H1 |
C |
N |
H2A |
240.7 |
240.0 |
| C1 |
C |
N |
HN3 |
180.0 |
300.0 |
| C1 |
C |
N |
HN1 |
300.0 |
60.0 |
| C1 |
C |
N |
HN2 |
60.0 |
180.0 |
| N |
C |
C1 |
H1 |
120.4 |
120.0 |
| N |
C |
C1 |
H2A |
239.6 |
240.1 |
| C2 |
C1 |
C |
C6 |
181.5 |
180.3 |
| C |
C1 |
C6 |
C5 |
181.7 |
179.8 |
| C |
C1 |
C6 |
H6 |
1.7 |
360.0 |
| C |
C1 |
C2 |
C3 |
178.5 |
180.0 |
| C |
C1 |
C2 |
H2 |
358.5 |
360.0 |
| H1 |
C |
C1 |
H2A |
119.2 |
120.0 |
| C |
C1 |
C6 |
C2 |
181.5 |
180.3 |
| C6 |
C1 |
C |
H1 |
181.3 |
330.0 |
| C6 |
C1 |
C |
H2A |
62.0 |
210.0 |
| C6 |
C1 |
C2 |
C3 |
0.0 |
0.3 |
| C6 |
C1 |
C2 |
H2 |
180.0 |
180.3 |
| C1 |
C6 |
C5 |
H5 |
179.7 |
180.3 |
| C |
C1 |
C2 |
C6 |
178.5 |
179.7 |
| C2 |
C1 |
C |
H1 |
2.8 |
150.3 |
| C2 |
C1 |
C |
H2A |
243.6 |
30.2 |
| C2 |
C1 |
C6 |
C5 |
0.2 |
359.5 |
| C2 |
C1 |
C6 |
H6 |
180.2 |
179.7 |
| C1 |
C2 |
C3 |
C4 |
360.0 |
360.0 |
| C3 |
C2 |
C1 |
H2 |
180.0 |
180.0 |
| C1 |
C2 |
C3 |
H3 |
180.0 |
179.9 |
| C1 |
C6 |
C5 |
H6 |
180.0 |
180.1 |
| C6 |
C5 |
C4 |
H4 |
180.3 |
179.9 |
| C3 |
C2 |
C1 |
C6 |
0.0 |
0.3 |
| C1 |
C2 |
C3 |
H2 |
180.0 |
180.0 |
| C4 |
C3 |
C2 |
H3 |
180.0 |
180.0 |
| C2 |
C3 |
C4 |
H4 |
179.9 |
179.9 |
| C1 |
C6 |
C5 |
C4 |
359.7 |
0.4 |
| C5 |
C4 |
C3 |
H3 |
179.9 |
180.0 |
| C3 |
C4 |
C5 |
H4 |
180.0 |
179.9 |
| C4 |
C3 |
C2 |
H2 |
180.0 |
180.0 |
| C2 |
C3 |
C4 |
H3 |
180.0 |
180.0 |
| C5 |
C4 |
C3 |
H4 |
180.0 |
180.1 |
| HN3 |
N |
C |
C1 |
180.0 |
300.0 |
| C |
N |
HN3 |
HN1 |
120.0 |
120.0 |
| C |
N |
HN3 |
HN2 |
240.0 |
240.0 |
| HN3 |
N |
C |
H1 |
300.4 |
60.0 |
| HN3 |
N |
C |
H2A |
59.6 |
180.0 |
| HN1 |
N |
HN3 |
HN2 |
120.0 |
120.0 |
| HN1 |
N |
C |
C1 |
300.0 |
60.0 |
| C |
N |
HN1 |
HN3 |
240.0 |
240.0 |
| C |
N |
HN1 |
HN2 |
120.0 |
120.0 |
| HN1 |
N |
C |
H1 |
60.4 |
180.0 |
| HN1 |
N |
C |
H2A |
179.6 |
300.0 |
| HN3 |
N |
HN1 |
HN2 |
240.0 |
240.0 |
| HN2 |
N |
C |
C1 |
60.0 |
180.0 |
| C |
N |
HN2 |
HN3 |
120.0 |
120.0 |
| C |
N |
HN2 |
HN1 |
240.0 |
240.0 |
| HN2 |
N |
C |
H1 |
180.4 |
300.0 |
| HN2 |
N |
C |
H2A |
299.6 |
60.0 |
| HN3 |
N |
HN2 |
HN1 |
120.0 |
120.0 |
| N |
C |
H1 |
C1 |
237.8 |
240.0 |
| H1 |
C |
N |
HN3 |
300.4 |
60.0 |
| H1 |
C |
N |
HN1 |
60.4 |
180.0 |
| H1 |
C |
N |
HN2 |
180.4 |
300.0 |
| N |
C |
H1 |
H2A |
118.9 |
119.9 |
| H1 |
C |
C1 |
C6 |
181.3 |
330.0 |
| H1 |
C |
C1 |
C2 |
2.8 |
150.3 |
| C1 |
C |
H1 |
H2A |
241.1 |
240.0 |
| N |
C |
H2A |
C1 |
122.2 |
120.0 |
| H2A |
C |
N |
HN3 |
59.6 |
180.0 |
| H2A |
C |
N |
HN1 |
179.6 |
300.0 |
| H2A |
C |
N |
HN2 |
299.6 |
60.0 |
| N |
C |
H2A |
H1 |
241.1 |
240.0 |
| H2A |
C |
C1 |
C6 |
62.0 |
210.0 |
| H2A |
C |
C1 |
C2 |
243.6 |
30.2 |
| C1 |
C |
H2A |
H1 |
118.9 |
120.1 |
| H2 |
C2 |
C1 |
C6 |
180.0 |
180.3 |
| C1 |
C2 |
H2 |
C3 |
180.0 |
180.0 |
| H2 |
C2 |
C3 |
C4 |
180.0 |
180.0 |
| H2 |
C2 |
C3 |
H3 |
360.0 |
359.9 |
| C2 |
C3 |
H3 |
C4 |
180.0 |
180.0 |
| H3 |
C3 |
C2 |
H2 |
360.0 |
359.9 |
| H3 |
C3 |
C4 |
H4 |
359.9 |
360.0 |
| H4 |
C4 |
C3 |
H3 |
359.9 |
360.0 |
| H5 |
C5 |
C4 |
H4 |
0.3 |
360.0 |
| C1 |
C6 |
H6 |
C5 |
180.0 |
179.9 |
| H6 |
C6 |
C5 |
H5 |
359.7 |
0.2 |