PDB Chemical Component UC4

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for UC4

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
CL	C2	1.762	1.736
C1	C2	1.420	1.398
C1	C6	1.391	1.395
C1	C7	1.516	1.476
C2	C3	1.397	1.382
C3	C4	1.361	1.382
C3	H3	1.103	1.080
C4	C5	1.399	1.390
C4	H4	1.103	1.080
C5	C6	1.396	1.385
C5	N	1.424	1.399
C6	H6	1.103	1.079
O7	C7	1.200	1.214
C7	O8	1.306	1.347
O8	C8	1.458	1.453
C8	C9	1.487	1.530
C8	C10	1.488	1.530
C8	H8	1.114	1.089
C9	H91	1.115	1.090
C9	H92	1.115	1.089
C9	H93	1.114	1.090
C10	H101	1.115	1.090
C10	H102	1.114	1.090
C10	H103	1.114	1.090
OA	CB	1.365	1.326
OA	CE	1.406	1.418
CB	CC	1.346	1.328
CB	CF	1.454	1.507
CC	S	1.772	1.765
CC	CG	1.544	1.464
S	CD	1.799	1.823
CD	CE	1.466	1.536
CD	HD1	1.115	1.090
CD	HD2	1.115	1.090
CE	HE1	1.115	1.090
CE	HE2	1.115	1.089
CF	HF1	1.116	1.089
CF	HF2	1.114	1.090
CF	HF3	1.115	1.091
OG	CG	1.220	1.217
CG	N	1.397	1.347
N	HN	1.020	0.970

Bond Angles for UC4

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
CL	C2	C1	124.3	120.0
CL	C2	C3	116.1	120.1
C2	C1	C6	118.4	119.8
C2	C1	C7	127.4	120.1
C1	C2	C3	119.7	119.9
C6	C1	C7	114.2	120.1
C1	C6	C5	121.2	119.8
C1	C6	H6	119.2	120.2
C1	C7	O7	122.8	120.0
C1	C7	O8	113.2	120.0
C2	C3	C4	121.0	120.2
C2	C3	H3	120.9	119.8
C4	C3	H3	118.2	120.0
C3	C4	C5	120.5	120.3
C3	C4	H4	118.4	119.8
C5	C4	H4	121.1	120.0
C4	C5	C6	119.2	120.1
C4	C5	N	119.7	119.9
C6	C5	N	121.0	120.0
C5	C6	H6	119.5	120.1
C5	N	CG	131.1	120.0
C5	N	HN	115.7	120.0
O7	C7	O8	124.1	120.0
C7	O8	C8	117.7	120.0
O8	C8	C9	106.1	109.5
O8	C8	C10	106.0	109.5
O8	C8	H8	115.8	109.5
C9	C8	C10	114.8	109.4
C9	C8	H8	107.2	109.5
C8	C9	H91	106.1	109.5
C8	C9	H92	113.5	109.4
C8	C9	H93	113.5	109.5
C10	C8	H8	107.3	109.4
C8	C10	H101	105.9	109.5
C8	C10	H102	113.5	109.5
C8	C10	H103	113.5	109.5
H91	C9	H92	113.4	109.5
H91	C9	H93	113.5	109.5
H92	C9	H93	97.0	109.5
H101	C10	H102	113.5	109.4
H101	C10	H103	113.6	109.5
H102	C10	H103	97.0	109.5
CB	OA	CE	119.6	112.9
OA	CB	CC	123.9	129.9
OA	CB	CF	108.4	115.1
OA	CE	CD	113.4	109.5
OA	CE	HE1	110.7	109.4
OA	CE	HE2	110.7	109.4
CC	CB	CF	127.7	115.1
CB	CC	S	122.0	121.7
CB	CC	CG	123.7	119.2
CB	CF	HF1	108.4	109.5
CB	CF	HF2	112.6	109.5
CB	CF	HF3	112.6	109.4
S	CC	CG	114.3	119.1
CC	S	CD	101.1	98.3
CC	CG	OG	121.8	120.1
CC	CG	N	117.6	120.0
S	CD	CE	111.9	106.7
S	CD	HD1	111.3	110.2
S	CD	HD2	111.3	109.9
CE	CD	HD1	111.3	110.0
CE	CD	HD2	111.3	110.0
CD	CE	HE1	110.8	109.4
CD	CE	HE2	110.8	109.5
HD1	CD	HD2	99.1	110.1
HE1	CE	HE2	99.6	109.5
HF1	CF	HF2	112.6	109.5
HF1	CF	HF3	112.6	109.5
HF2	CF	HF3	97.9	109.4
OG	CG	N	120.6	119.9
CG	N	HN	113.2	120.0

Torsion Angles for UC4

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
CL	C2	C1	C6	178.8	179.9
CL	C2	C1	C7	0.5	0.2
C1	C2	CL	C3	180.9	179.5
CL	C2	C3	C4	181.6	180.0
CL	C2	C3	H3	1.7	359.8
CL	C2	C1	C3	179.0	180.5
C6	C1	C2	C7	178.3	179.7
C2	C1	C6	C5	359.2	0.3
C2	C1	C6	H6	179.2	180.2
C2	C1	C7	O7	127.1	359.7
C2	C1	C7	O8	306.9	179.7
C1	C2	C3	C4	0.7	0.5
C1	C2	C3	H3	180.8	180.2
C2	C1	C6	C7	181.5	180.3
C6	C1	C2	C3	359.8	359.4
C6	C1	C7	O7	308.7	180.0
C6	C1	C7	O8	128.5	0.1
C4	C5	C6	C1	1.3	0.0
C1	C6	C5	N	183.6	180.0
C5	C6	C1	H6	180.0	180.1
C2	C1	C7	C6	178.4	179.7
C7	C1	C2	C3	181.4	179.8
C7	C1	C6	C5	177.8	180.0
C7	C1	C6	H6	357.7	359.9
O7	C7	C1	O8	180.3	180.0
C1	C7	O8	C8	248.3	180.0
CL	C2	C3	C1	180.9	179.5
C3	C2	C1	C6	359.8	359.4
C3	C2	C1	C7	181.4	179.8
C4	C3	C2	H3	179.9	180.3
C2	C3	C4	C5	359.8	359.8
C2	C3	C4	H4	179.9	179.7
C2	C3	C4	H3	180.1	179.7
C5	C4	C3	H4	179.9	180.1
C3	C4	C5	C6	359.2	359.9
C3	C4	C5	N	177.0	180.0
C2	C3	H3	C4	179.9	180.3
H3	C3	C4	C5	179.7	180.1
H3	C3	C4	H4	359.8	360.0
C1	C6	C5	C4	1.3	0.0
C5	C4	C3	H3	179.7	180.1
C3	C4	C5	H4	180.1	179.9
C6	C5	C4	N	182.3	180.0
C4	C5	C6	H6	181.3	180.1
C4	C5	N	CG	197.3	213.4
C4	C5	N	HN	17.3	33.4
H4	C4	C3	H3	359.8	360.0
C3	C4	H4	C5	179.9	180.1
H4	C4	C5	C6	179.2	180.0
H4	C4	C5	N	356.9	0.0
C5	C6	C1	C7	177.8	180.0
C1	C6	C5	H6	180.0	179.9
C6	C5	C4	H4	179.2	180.0
C4	C5	C6	N	177.7	180.0
C6	C5	N	CG	15.0	33.4
C6	C5	N	HN	195.0	213.5
N	C5	C4	H4	356.9	0.0
C4	C5	N	C6	182.3	180.0
N	C5	C6	H6	3.6	0.1
CC	CG	N	C5	26.2	185.5
OG	CG	N	C5	206.3	5.6
CG	N	C5	HN	180.0	179.9
H6	C6	C1	C7	357.7	359.9
C1	C6	H6	C5	180.0	180.1
H6	C6	C5	N	3.6	0.1
C1	C7	O7	O8	179.7	180.0
O7	C7	O8	C8	68.1	0.0
C1	C7	O8	O7	180.3	180.0
C7	O8	C8	C9	117.4	150.0
C7	O8	C8	C10	239.8	270.0
C7	O8	C8	H8	358.7	30.0
C9	C8	O8	C10	237.6	240.0
C9	C8	O8	H8	118.7	120.1
O8	C8	C9	H91	180.0	180.0
O8	C8	C9	H92	305.2	300.0
O8	C8	C9	H93	54.7	60.0
C10	C8	O8	H8	241.1	240.0
O8	C8	C10	H101	180.0	300.0
O8	C8	C10	H102	305.2	60.0
O8	C8	C10	H103	54.8	180.0
O8	C8	C9	C10	116.6	120.0
O8	C8	C9	H8	235.7	239.9
C10	C8	C9	H8	119.1	119.9
C9	C8	C10	H101	296.7	60.0
C9	C8	C10	H102	61.9	180.0
C9	C8	C10	H103	171.4	300.0
H91	C9	C8	H92	234.8	240.0
H91	C9	C8	H93	125.3	120.0
H92	C9	C8	H93	250.5	240.0
O8	C8	C10	C9	243.3	240.0
O8	C8	C10	H8	124.3	120.0
C9	C8	C10	H8	241.0	240.0
C10	C8	C9	H91	63.4	60.0
C10	C8	C9	H92	188.6	180.0
C10	C8	C9	H93	298.1	300.0
H101	C10	C8	H102	234.8	240.0
H101	C10	C8	H103	125.3	120.0
H102	C10	C8	H103	250.4	240.0
O8	C8	H8	C9	118.1	120.0
O8	C8	H8	C10	241.9	240.0
C9	C8	H8	C10	123.8	120.0
H8	C8	C9	H91	304.3	300.0
H8	C8	C9	H92	69.5	60.0
H8	C8	C9	H93	179.0	180.0
H8	C8	C10	H101	55.7	180.0
H8	C8	C10	H102	180.9	300.0
H8	C8	C10	H103	290.4	60.0
H91	C9	C8	C10	63.4	60.0
H91	C9	C8	H8	304.3	300.0
C8	C9	H91	H92	125.3	120.0
C8	C9	H91	H93	234.7	240.0
H92	C9	H91	H93	109.4	120.0
H92	C9	C8	C10	188.6	180.0
H92	C9	C8	H8	69.5	60.0
C8	C9	H92	H91	238.8	240.0
C8	C9	H92	H93	119.5	120.0
H91	C9	H92	H93	240.7	240.0
H93	C9	C8	C10	298.1	300.0
H93	C9	C8	H8	179.0	180.0
C8	C9	H93	H91	121.2	120.0
C8	C9	H93	H92	240.6	240.0
H91	C9	H93	H92	119.3	120.0
H101	C10	C8	H8	55.7	180.0
C8	C10	H101	H102	125.2	120.0
C8	C10	H101	H103	234.8	240.0
H102	C10	H101	H103	109.6	120.0
H102	C10	C8	H8	180.9	300.0
C8	C10	H102	H101	239.0	240.0
C8	C10	H102	H103	119.5	120.0
H101	C10	H102	H103	240.5	240.0
H103	C10	C8	H8	290.4	60.0
C8	C10	H103	H101	121.1	120.0
C8	C10	H103	H102	240.6	240.0
H101	C10	H103	H102	119.5	120.0
CB	OA	CE	CD	56.5	63.3
CB	OA	CE	HE1	181.8	183.2
CB	OA	CE	HE2	291.3	303.1
CC	CB	OA	CF	180.3	180.0
OA	CB	CC	S	12.7	2.8
OA	CB	CC	CG	191.5	182.5
OA	CB	CF	HF1	180.0	360.0
OA	CB	CF	HF2	305.2	120.1
OA	CB	CF	HF3	54.8	240.0
CE	OA	CB	CC	328.5	333.5
CE	OA	CB	CF	148.2	153.5
S	CD	CE	OA	301.3	287.2
OA	CE	CD	HD1	176.0	46.7
OA	CE	CD	HD2	66.5	168.1
CD	CE	OA	HE1	234.7	240.1
CD	CE	OA	HE2	125.3	120.1
HE1	CE	OA	HE2	250.5	240.1
CC	CB	OA	CE	328.5	333.5
OA	CB	CC	CF	179.7	180.0
CC	CB	CF	HF1	359.7	180.0
CC	CB	CF	HF2	124.9	300.1
CC	CB	CF	HF3	234.5	60.0
S	CC	CB	CG	181.1	180.3
CB	CC	S	CD	344.8	347.9
CB	CC	CG	OG	217.3	360.0
CB	CC	CG	N	37.3	180.1
CF	CB	OA	CE	148.2	153.5
OA	CB	CF	CC	180.3	180.0
CF	CB	CC	S	193.0	182.8
CF	CB	CC	CG	11.9	2.5
HF1	CF	CB	HF2	234.8	239.9
HF1	CF	CB	HF3	125.2	120.0
HF2	CF	CB	HF3	250.5	240.0
S	CC	CB	CF	193.0	182.8
CB	CC	S	CG	179.0	179.7
S	CC	CG	OG	36.3	179.7
S	CC	CG	N	216.3	359.8
CC	S	CD	CE	36.6	42.9
CC	S	CD	HD1	161.8	283.5
CC	S	CD	HD2	271.3	162.1
C5	N	CG	CC	26.2	185.5
CG	CC	CB	CF	11.9	2.5
CB	CC	CG	S	181.0	180.3
CG	CC	S	CD	165.8	168.2
OG	CG	CC	N	180.0	179.9
CC	CG	N	HN	206.2	5.4
OA	CE	CD	S	301.3	287.2
CD	S	CC	CG	165.8	168.2
CE	CD	S	HD1	234.7	119.4
CE	CD	S	HD2	125.2	240.8
S	CD	CE	HE1	176.1	167.2
S	CD	CE	HE2	66.5	47.2
HD1	CD	S	HD2	250.5	121.4
OA	CE	CD	HE1	125.2	120.0
OA	CE	CD	HE2	234.8	240.0
S	CD	CE	HD1	125.3	240.5
S	CD	CE	HD2	234.8	119.1
HD1	CD	CE	HD2	109.5	238.6
HE1	CE	CD	HE2	109.5	120.0
S	CD	HD1	CE	234.4	117.4
S	CD	HD1	HD2	117.2	238.7
CE	CD	HD1	HD2	242.8	121.3
HD1	CD	CE	HE1	50.8	286.7
HD1	CD	CE	HE2	301.3	166.7
S	CD	HD2	CE	125.6	242.8
S	CD	HD2	HD1	242.8	121.5
CE	CD	HD2	HD1	117.2	238.6
HD2	CD	CE	HE1	301.3	48.1
HD2	CD	CE	HE2	191.8	288.1
OA	CE	HE1	CD	233.2	240.0
OA	CE	HE1	HE2	116.6	119.9
HE1	CE	CD	HD1	50.8	286.7
HE1	CE	CD	HD2	301.3	48.1
CD	CE	HE1	HE2	243.3	239.9
OA	CE	HE2	CD	126.8	120.1
OA	CE	HE2	HE1	243.4	240.1
HE2	CE	CD	HD1	301.3	166.7
HE2	CE	CD	HD2	191.8	288.1
CD	CE	HE2	HE1	116.7	120.0
CB	CF	HF1	HF2	125.2	120.0
CB	CF	HF1	HF3	234.8	240.0
HF2	CF	HF1	HF3	109.6	120.0
CB	CF	HF2	HF1	237.1	240.0
CB	CF	HF2	HF3	118.5	120.0
HF1	CF	HF2	HF3	241.4	240.0
CB	CF	HF3	HF1	122.9	120.0
CB	CF	HF3	HF2	241.5	240.0
HF1	CF	HF3	HF2	118.6	120.1
C5	N	CG	OG	206.3	5.6
CC	CG	OG	N	180.0	180.1
OG	CG	N	HN	26.3	185.5
C5	N	CG	HN	180.0	180.1
CC	CG	N	OG	180.0	179.9
C5	N	HN	CG	180.0	179.9