PDB Chemical Component UC1

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for UC1

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C2 C1 1.394 1.387
C2 C3 1.398 1.386
C2 H2 1.103 1.080
C4 C5 1.394 1.383
C4 C3 1.399 1.389
C4 CL 1.708 1.736
C5 C6 1.367 1.381
C5 H5 1.103 1.079
C6 C1 1.401 1.390
C6 H6 1.103 1.080
O7 C8 1.415 1.337
O7 C11 1.385 1.343
C8 C9 1.341 1.363
C8 CA 1.526 1.506
C9 C10 1.505 1.471
C9 C 1.518 1.472
C10 C11 1.346 1.342
C10 H10 1.103 1.080
C11 H11 1.103 1.080
CA HA1 1.116 1.090
CA HA2 1.115 1.090
CA HA3 1.114 1.090
C S 1.689 1.712
C N 1.395 1.348
N C1 1.420 1.398
N HN 1.021 0.970
C3 OB 1.385 1.359
OB CC 1.448 1.428
CC CD 1.517 1.508
CC HC1 1.115 1.090
CC HC2 1.115 1.090
CD CE 1.335 1.310
CD HD 1.103 1.079
CE CF 1.483 1.507
CE CG 1.484 1.507
CF HF1 1.115 1.090
CF HF2 1.114 1.089
CF HF3 1.116 1.090
CG HG1 1.115 1.090
CG HG2 1.115 1.089
CG HG3 1.114 1.090

Bond Angles for UC1

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C1 C2 C3 120.3 119.9
C1 C2 H2 119.7 120.1
C2 C1 C6 119.4 119.9
C2 C1 N 124.7 120.1
C3 C2 H2 120.0 120.0
C2 C3 C4 119.3 120.0
C2 C3 OB 120.5 120.0
C5 C4 C3 120.0 120.1
C5 C4 CL 118.2 120.0
C4 C5 C6 120.4 120.1
C4 C5 H5 120.8 120.0
C3 C4 CL 121.7 120.0
C4 C3 OB 120.1 120.0
C6 C5 H5 118.8 119.9
C5 C6 C1 120.6 120.1
C5 C6 H6 118.5 120.0
C1 C6 H6 120.9 119.9
C6 C1 N 115.9 120.0
C8 O7 C11 105.8 110.8
O7 C8 C9 111.5 108.4
O7 C8 CA 115.7 125.7
O7 C11 C10 111.2 109.1
O7 C11 H11 125.6 125.4
C9 C8 CA 132.7 125.8
C8 C9 C10 105.0 105.6
C8 C9 C 124.3 127.3
C8 CA HA1 115.7 109.5
C8 CA HA2 109.9 109.5
C8 CA HA3 109.9 109.5
C10 C9 C 130.7 127.1
C9 C10 C11 106.5 105.9
C9 C10 H10 131.0 127.0
C9 C S 122.0 120.0
C9 C N 120.3 120.1
C11 C10 H10 122.5 127.0
C10 C11 H11 123.2 125.5
HA1 CA HA2 109.9 109.4
HA1 CA HA3 109.9 109.4
HA2 CA HA3 100.3 109.5
S C N 117.6 120.0
C N C1 128.3 120.0
C N HN 114.8 120.0
C1 N HN 116.9 120.0
C3 OB CC 120.0 106.8
OB CC CD 108.7 109.5
OB CC HC1 112.5 109.5
OB CC HC2 112.5 109.5
CD CC HC1 112.5 109.5
CD CC HC2 112.4 109.5
CC CD CE 125.0 120.0
CC CD HD 124.5 120.0
HC1 CC HC2 98.0 109.4
CE CD HD 110.5 120.0
CD CE CF 122.5 120.0
CD CE CG 122.8 120.0
CF CE CG 114.7 120.0
CE CF HF1 122.5 109.5
CE CF HF2 107.6 109.5
CE CF HF3 107.5 109.5
CE CG HG1 122.8 109.5
CE CG HG2 107.5 109.5
CE CG HG3 107.5 109.5
HF1 CF HF2 107.6 109.4
HF1 CF HF3 107.6 109.5
HF2 CF HF3 102.2 109.5
HG1 CG HG2 107.4 109.5
HG1 CG HG3 107.5 109.4
HG2 CG HG3 102.3 109.5

Torsion Angles for UC1

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C3 C2 C1 H2 180.0 180.0
C1 C2 C3 C4 359.7 0.2
C1 C2 C3 OB 178.3 180.0
C5 C6 C1 C2 359.5 360.0
C2 C1 C6 H6 179.5 180.0
C6 C1 C2 N 180.5 180.0
C N C1 C2 14.3 138.9
C2 C1 N HN 194.4 318.9
C1 C2 C3 H2 180.0 180.0
C3 C2 C1 C6 0.8 0.0
C3 C2 C1 N 180.3 180.0
C5 C4 C3 C2 359.5 359.5
C2 C3 C4 CL 177.1 180.0
C4 C3 C2 OB 181.4 180.3
C2 C3 OB CC 347.7 0.0
C1 C2 H2 C3 180.0 180.0
H2 C2 C1 C6 180.8 180.0
H2 C2 C1 N 0.4 0.0
H2 C2 C3 C4 179.7 180.2
H2 C2 C3 OB 358.2 360.0
C2 C3 C4 C5 359.5 359.5
C3 C4 C5 CL 177.6 180.5
C5 C4 C3 OB 181.0 179.8
C6 C5 C4 H5 180.0 180.2
C4 C5 C6 C1 359.7 359.7
C4 C5 C6 H6 179.8 179.7
C4 C3 C2 H2 179.7 180.2
C2 C3 C4 OB 178.6 179.7
C5 C4 C3 CL 182.5 179.5
C3 C4 C5 C6 0.8 0.6
C3 C4 C5 H5 180.8 180.3
C4 C3 OB CC 166.3 179.7
C5 C4 CL C3 177.6 180.5
CL C4 C5 C6 183.1 180.0
CL C4 C5 H5 3.2 359.8
CL C4 C3 OB 358.5 0.3
C2 C1 C6 C5 359.5 360.0
C6 C5 C4 C3 0.8 0.6
C6 C5 C4 CL 183.1 180.0
C4 C5 C6 H5 180.0 179.8
C1 C6 C5 H6 179.9 180.0
C5 C6 C1 N 179.9 180.0
H5 C5 C4 C3 180.8 180.3
H5 C5 C4 CL 3.2 359.8
C4 C5 H5 C6 180.0 180.2
H5 C5 C6 C1 179.7 180.0
H5 C5 C6 H6 359.7 360.0
C6 C1 C2 C3 0.8 0.0
C6 C1 C2 H2 180.8 180.0
C2 C1 C6 N 179.6 180.0
C1 C6 C5 H5 179.7 180.0
C5 C6 C1 H6 180.1 180.0
C N C1 C6 193.9 318.9
C6 C1 N HN 13.9 138.9
H6 C6 C5 H5 359.7 360.0
C5 C6 H6 C1 179.9 180.0
H6 C6 C1 N 359.9 0.0
C8 O7 C11 C10 359.9 359.7
C8 O7 C11 H11 179.9 179.8
C9 C8 O7 CA 180.4 180.4
O7 C8 C9 C10 359.8 359.6
O7 C8 C9 C 182.3 179.9
O7 C8 CA HA1 180.0 360.0
O7 C8 CA HA2 305.2 120.0
O7 C8 CA HA3 54.8 240.0
C11 O7 C8 C9 0.2 0.4
C11 O7 C8 CA 179.8 180.0
C9 C10 C11 O7 0.0 0.0
O7 C11 C10 H10 180.0 180.0
C10 C11 O7 H11 180.0 180.0
C9 C8 O7 C11 0.2 0.4
O7 C8 C9 CA 179.5 179.6
C9 C8 CA HA1 359.5 179.5
C9 C8 CA HA2 124.7 299.5
C9 C8 CA HA3 234.2 59.5
C10 C9 C8 C 177.6 179.7
C8 C9 C10 C11 0.1 0.2
C8 C9 C10 H10 180.1 180.2
C8 C9 C S 35.1 359.7
C8 C9 C N 211.0 179.7
CA C8 O7 C11 179.8 180.0
O7 C8 CA C9 180.5 180.4
CA C8 C9 C10 180.3 180.0
CA C8 C9 C 2.8 0.3
HA1 CA C8 HA2 234.8 240.0
HA1 CA C8 HA3 125.2 120.0
HA2 CA C8 HA3 250.5 240.0
O7 C11 C10 C9 0.0 0.0
C10 C9 C8 CA 180.3 180.0
C8 C9 C10 C 182.6 180.3
C10 C9 C S 218.2 180.0
C10 C9 C N 34.1 0.1
C11 C10 C9 H10 180.0 180.0
C9 C10 C11 H11 180.0 180.0
C C9 C8 CA 2.8 0.3
C8 C9 C C10 176.9 179.7
C C9 C10 C11 177.4 179.9
C C9 C10 H10 357.5 360.0
S C C9 N 184.1 179.9
C9 C N C1 18.6 174.3
C9 C N HN 198.5 354.2
O7 C11 C10 H11 180.0 180.0
C11 C10 C9 C 177.4 179.9
C9 C10 C11 H10 180.0 180.0
H10 C10 C9 C 357.5 360.0
C9 C10 H10 C11 180.0 180.0
H10 C10 C11 H11 0.0 360.0
O7 C11 H11 C10 180.0 180.0
H11 C11 C10 H10 0.0 360.0
C8 CA HA1 HA2 125.3 120.0
C8 CA HA1 HA3 234.8 240.0
HA2 CA HA1 HA3 109.5 119.9
C8 CA HA2 HA1 231.5 239.9
C8 CA HA2 HA3 115.8 120.0
HA1 CA HA2 HA3 244.3 240.1
C8 CA HA3 HA1 128.5 120.1
C8 CA HA3 HA2 244.2 240.0
HA1 CA HA3 HA2 115.7 119.9
C9 C S N 176.0 180.1
S C N C1 194.7 354.3
S C N HN 14.6 174.3
C2 C1 N C 14.3 138.9
C6 C1 N C 193.9 318.9
C9 C N S 183.9 179.9
C1 N C HN 180.1 180.0
N C1 C2 C3 180.3 180.0
N C1 C2 H2 0.4 0.0
C2 C1 N C6 180.4 180.0
N C1 C6 H6 359.9 0.0
C N C1 HN 179.9 180.0
C N HN C1 180.1 180.0
OB C3 C2 H2 358.2 360.0
C2 C3 OB C4 181.4 180.3
OB C3 C4 CL 358.5 0.3
C3 OB CC CD 74.0 180.0
C3 OB CC HC1 199.2 60.0
C3 OB CC HC2 308.8 300.0
CD CC OB HC1 234.8 120.0
CD CC OB HC2 125.2 240.0
OB CC CD CE 88.4 135.8
OB CC CD HD 268.5 315.7
HC1 CC OB HC2 250.4 120.0
OB CC CD HC1 125.2 240.0
OB CC CD HC2 234.8 120.0
HC1 CC CD HC2 109.5 240.0
CE CD CC HD 179.9 180.1
CC CD CE CF 180.1 179.3
CC CD CE CG 0.5 359.3
OB CC HC1 CD 236.9 120.0
OB CC HC1 HC2 118.5 240.0
CD CC HC1 HC2 241.6 120.0
HC1 CC CD CE 323.2 255.8
HC1 CC CD HD 143.3 75.8
OB CC HC2 CD 123.1 240.0
OB CC HC2 HC1 241.5 120.0
CD CC HC2 HC1 118.4 240.0
HC2 CC CD CE 213.7 15.8
HC2 CC CD HD 33.8 195.7
CE CD CC HC1 323.2 255.8
CE CD CC HC2 213.7 15.8
CC CD CE HD 180.1 179.9
CF CE CD CG 179.6 180.1
CD CE CF HF1 179.9 180.0
CD CE CF HF2 305.3 299.9
CD CE CF HF3 54.7 59.9
CD CE CG HG1 180.1 54.8
CD CE CG HG2 305.3 174.8
CD CE CG HG3 54.8 294.8
HD CD CC HC1 143.3 75.8
HD CD CC HC2 33.8 195.7
CC CD HD CE 179.9 180.1
HD CD CE CF 0.1 359.4
HD CD CE CG 180.5 179.3
CF CE CD HD 0.1 359.4
CD CE CF CG 180.4 179.9
CF CE CG HG1 0.4 234.7
CF CE CG HG2 125.6 354.7
CF CE CG HG3 235.1 114.7
HF1 CF CE HF2 234.6 240.1
HF1 CF CE HF3 125.2 120.1
HF2 CF CE HF3 250.6 240.0
CG CE CD HD 180.5 179.3
CD CE CG CF 179.6 180.1
CG CE CF HF1 359.6 0.1
CG CE CF HF2 124.9 120.0
CG CE CF HF3 234.4 240.0
HG1 CG CE HG2 234.8 240.0
HG1 CG CE HG3 125.3 120.0
HG2 CG CE HG3 250.5 240.0
HF1 CF CE CG 359.6 0.1
CE CF HF1 HF2 125.3 120.0
CE CF HF1 HF3 234.8 240.0
HF2 CF HF1 HF3 109.5 120.0
HF2 CF CE CG 124.9 120.0
CE CF HF2 HF1 226.2 240.0
CE CF HF2 HF3 113.1 120.0
HF1 CF HF2 HF3 246.9 240.0
HF3 CF CE CG 234.4 240.0
CE CF HF3 HF1 133.7 120.0
CE CF HF3 HF2 246.9 240.0
HF1 CF HF3 HF2 113.2 120.0
CE CG HG1 HG2 125.2 120.0
CE CG HG1 HG3 234.7 240.0
HG2 CG HG1 HG3 109.5 120.0
CE CG HG2 HG1 226.1 240.0
CE CG HG2 HG3 113.0 120.0
HG1 CG HG2 HG3 247.0 240.0
CE CG HG3 HG1 134.0 120.0
CE CG HG3 HG2 247.0 240.0
HG1 CG HG3 HG2 113.0 120.0