PDB Chemical Component UBW

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for UBW

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C6 C1 1.390 1.383
C1 C2 1.390 1.382
C1 H1 1.080 1.079
C2 C3 1.391 1.383
C2 H2 1.080 1.080
C4 C3 1.389 1.382
C3 H3 1.079 1.080
C5 C4 1.389 1.382
C4 C7 1.509 1.507
C6 C5 1.391 1.382
C5 H5 1.080 1.081
C6 H6 1.079 1.080
C7 O8 1.432 1.452
C7 H7 1.100 1.090
C7 H7A 1.100 1.090
O8 C9 1.442 1.347
C9 O21 1.226 1.215
C9 N10 1.313 1.348
N10 C11 1.443 1.465
N10 HN10 1.000 0.970
C11 P12 1.805 1.822
C11 H11 1.100 1.090
C11 H11A 1.100 1.090
O22 P12 1.518 1.480
O23 P12 1.484 1.610
P12 N13 1.678 1.683
N13 C14 1.461 1.469
N13 HN13 1.000 1.009
C15 C14 1.510 1.506
C14 C24 1.525 1.531
C14 H14 1.100 1.090
N16 C15 1.335 1.348
O28 C15 1.229 1.213
C17 N16 1.466 1.465
N16 HN16 1.000 0.970
C18 C17 1.508 1.507
C17 C29 1.524 1.530
C17 H17 1.100 1.089
O19 C18 1.253 1.207
O20 C18 1.256 1.343
O20 HO20 0.950 0.967
O23 HO23 0.950 0.967
C24 C25 1.528 1.530
C24 H24 1.100 1.090
C24 H24A 1.100 1.090
C27 C25 1.525 1.529
C25 C26 1.527 1.531
C25 H25 1.100 1.090
C26 H26 1.100 1.090
C26 H26A 1.100 1.090
C26 H26B 1.100 1.090
C27 H27 1.100 1.090
C27 H27A 1.100 1.091
C27 H27B 1.100 1.090
C29 C30 1.518 1.530
C29 H29 1.100 1.091
C29 H29A 1.100 1.090
C30 C31 1.516 1.529
C30 H30 1.100 1.090
C30 H30A 1.100 1.091
C31 H31 1.100 1.091
C31 H31A 1.100 1.090
C31 H31B 1.100 1.090

Bond Angles for UBW

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C6 C1 H1 119.9 120.0
C1 C2 H2 120.2 120.0
C2 C3 H3 119.9 119.9
C4 C3 H3 119.9 120.0
C5 C4 C7 120.1 120.0
C6 C5 C4 119.7 120.0
C4 C5 H5 120.2 120.0
C4 C7 O8 108.5 109.4
C4 C7 H7 109.8 109.5
C4 C7 H7A 109.8 109.5
C6 C5 H5 120.2 120.0
C5 C6 H6 119.9 120.0
O8 C7 H7 109.8 109.4
O8 C7 H7A 109.8 109.5
C7 O8 C9 117.9 117.0
H7 C7 H7A 109.2 109.5
O8 C9 O21 119.3 120.0
O8 C9 N10 119.1 120.0
O21 C9 N10 121.6 120.0
C9 N10 C11 123.1 120.0
C9 N10 HN10 118.4 120.0
C11 N10 HN10 118.5 120.0
N10 C11 P12 110.1 109.5
N10 C11 H11 109.2 109.4
N10 C11 H11A 109.3 109.5
P12 C11 H11 109.3 109.5
P12 C11 H11A 109.3 109.5
C11 P12 N13 102.4 109.5
H11 C11 H11A 109.7 109.5
O22 P12 N13 108.6 109.5
O23 P12 N13 111.0 109.4
P12 N13 C14 121.5 111.0
P12 N13 HN13 105.6 111.0
C14 N13 HN13 105.6 111.0
N13 C14 C24 105.1 109.4
N13 C14 H14 111.4 109.5
C15 C14 C24 110.1 109.4
C15 C14 H14 106.5 109.5
C24 C14 H14 112.5 109.4
C14 C24 C25 112.3 109.5
C14 C24 H24 108.5 109.4
C14 C24 H24A 108.5 109.4
C17 N16 HN16 120.4 120.0
C18 C17 H17 105.2 109.5
C29 C17 H17 110.8 109.5
C17 C29 C30 112.3 109.5
C17 C29 H29 108.6 109.5
C17 C29 H29A 108.6 109.5
C25 C24 H24 108.5 109.5
C25 C24 H24A 108.5 109.5
C24 C25 C26 110.3 109.4
C24 C25 H25 107.1 109.5
H24 C24 H24A 110.4 109.5
C27 C25 H25 107.6 109.5
C26 C25 H25 109.7 109.4
C25 C26 H26 109.5 109.4
C25 C26 H26A 109.4 109.5
C25 C26 H26B 109.4 109.4
H26 C26 H26A 109.4 109.5
H26 C26 H26B 109.5 109.5
H26A C26 H26B 109.5 109.5
H27 C27 H27A 109.4 109.4
H27 C27 H27B 109.4 109.5
H27A C27 H27B 109.5 109.5
C30 C29 H29 108.5 109.4
C30 C29 H29A 108.5 109.5
C29 C30 C31 110.0 109.5
C29 C30 H30 109.3 109.4
C29 C30 H30A 109.3 109.5
H29 C29 H29A 110.4 109.5
C31 C30 H30 109.3 109.5
C31 C30 H30A 109.3 109.5
C30 C31 H31 109.5 109.5
C30 C31 H31A 109.5 109.5
C30 C31 H31B 109.5 109.5
H30 C30 H30A 109.6 109.5
H31 C31 H31A 109.5 109.5
H31 C31 H31B 109.4 109.4
H31A C31 H31B 109.5 109.4

Torsion Angles for UBW

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 C1 C2 H2 179.9 180.1
C1 C2 C3 H3 179.9 180.0
H1 C1 C2 H2 359.9 360.0
C4 C3 C2 H3 180.0 180.2
H2 C2 C3 H3 360.0 0.0
C2 C3 C4 H3 180.0 179.8
C5 C4 C3 H3 179.8 179.7
C5 C4 C7 O8 90.7 90.0
C5 C4 C7 H7 210.6 210.0
C5 C4 C7 H7A 330.7 330.1
C6 C5 C4 H5 180.0 180.2
C4 C5 C6 H6 179.4 179.7
C7 C4 C3 H3 0.2 0.3
C6 C5 C4 C7 180.1 179.9
C7 C4 C5 H5 0.1 359.7
O8 C7 C4 H7 240.0 240.1
O8 C7 C4 H7A 120.0 120.0
C4 C7 O8 C9 107.1 180.0
H7 C7 C4 H7A 240.0 239.9
C5 C6 C1 H1 180.4 180.0
C4 C5 C6 H5 180.0 179.8
H5 C5 C4 C7 0.1 359.7
C6 C5 H5 C4 180.0 179.8
H5 C5 C6 H6 359.4 360.0
H6 C6 C1 H1 0.4 0.1
H6 C6 C5 C4 179.4 179.7
H6 C6 C5 H5 359.4 360.0
C4 C7 O8 H7 120.0 119.9
C4 C7 O8 H7A 240.0 240.0
H7 C7 O8 H7A 120.0 120.1
C7 O8 C9 O21 344.9 360.0
C7 O8 C9 N10 167.7 180.0
C4 C7 H7 O8 240.8 240.1
C4 C7 H7 H7A 120.4 120.1
O8 C7 H7 H7A 239.6 240.0
H7 C7 O8 C9 347.1 60.0
C4 C7 H7A O8 119.2 120.0
C4 C7 H7A H7 239.6 240.0
O8 C7 H7A H7 120.4 120.0
H7A C7 O8 C9 227.1 300.0
C9 O8 C7 H7 347.1 60.0
C9 O8 C7 H7A 227.1 300.0
O21 C9 O8 N10 177.3 180.0
O8 C9 N10 C11 180.6 180.0
O8 C9 N10 HN10 0.6 360.0
O8 C9 O21 N10 182.8 180.0
O21 C9 N10 C11 3.4 0.1
O21 C9 N10 HN10 183.4 180.0
O8 C9 N10 O21 177.2 180.0
C11 N10 C9 HN10 180.0 180.1
C9 N10 C11 P12 204.4 95.0
C9 N10 C11 H11 324.4 215.0
C9 N10 C11 H11A 84.4 334.9
C9 N10 C11 HN10 180.0 179.9
P12 C11 N10 H11 240.0 240.0
P12 C11 N10 H11A 120.0 120.0
N10 C11 P12 N13 182.1 180.0
H11 C11 N10 H11A 240.0 240.0
C9 N10 HN10 C11 180.0 180.1
HN10 N10 C11 P12 24.4 275.0
HN10 N10 C11 H11 144.4 35.0
HN10 N10 C11 H11A 264.4 155.0
P12 C11 N10 HN10 24.4 275.0
N10 C11 P12 H11 120.0 120.0
N10 C11 P12 H11A 240.0 240.0
H11 C11 P12 H11A 120.0 120.0
O22 P12 C11 N13 116.3 120.0
O23 P12 C11 N13 242.6 240.0
C11 P12 N13 C14 135.5 175.2
C11 P12 N13 HN13 255.4 299.2
H11 C11 N10 HN10 144.4 35.0
N10 C11 H11 P12 239.5 240.0
N10 C11 H11 H11A 119.7 120.0
P12 C11 H11 H11A 240.3 240.0
H11 C11 P12 N13 62.1 60.0
H11A C11 N10 HN10 264.4 155.0
N10 C11 H11A P12 120.6 120.0
N10 C11 H11A H11 240.3 240.0
P12 C11 H11A H11 119.7 120.0
H11A C11 P12 N13 302.1 300.0
O22 P12 C11 H11 178.4 180.0
O22 P12 C11 H11A 58.4 60.0
C11 P12 O22 N13 247.5 240.0
O23 P12 O22 N13 123.9 119.9
O22 P12 N13 C14 16.5 55.1
O22 P12 N13 HN13 136.5 179.1
O23 P12 C11 H11 304.7 300.0
O23 P12 C11 H11A 184.7 180.0
C11 P12 O23 N13 111.8 120.0
O22 P12 O23 N13 237.4 240.0
O23 P12 N13 C14 251.1 295.2
O23 P12 N13 HN13 11.1 59.2
N13 P12 C11 H11 62.1 60.0
N13 P12 C11 H11A 302.1 300.0
C14 N13 P12 HN13 240.0 236.0
P12 N13 C14 C24 162.2 95.1
P12 N13 C14 H14 40.1 335.1
P12 N13 C14 HN13 120.0 124.0
C15 C14 N13 C24 119.2 120.0
C15 C14 N13 H14 241.3 239.9
C24 C14 N13 H14 122.1 119.9
N13 C14 C24 C25 181.5 185.7
N13 C14 C24 H24 301.5 305.8
N13 C14 C24 H24A 61.5 65.7
P12 N13 HN13 C14 230.1 236.0
HN13 N13 C14 C24 42.2 331.1
HN13 N13 C14 H14 280.1 211.1
C15 C14 N13 HN13 161.5 91.0
N13 C14 C15 C24 243.8 240.0
N13 C14 C15 H14 121.6 120.1
C24 C14 C15 H14 237.7 240.0
C15 C14 C24 C25 61.6 65.7
C15 C14 C24 H24 181.5 185.8
C15 C14 C24 H24A 301.5 305.7
C24 C14 N13 HN13 42.2 331.1
N13 C14 C24 H14 238.6 240.0
C15 C14 C24 H14 118.7 120.0
C25 C24 C14 H24 240.0 240.0
C25 C24 C14 H24A 120.0 120.0
C14 C24 C25 C26 191.6 66.9
C14 C24 C25 H25 310.9 307.0
H24 C24 C14 H24A 240.0 240.0
H14 C14 N13 HN13 280.1 211.1
N13 C14 H14 C24 117.8 120.0
C15 C14 H14 C24 239.2 240.0
H14 C14 C24 C25 302.9 305.7
H14 C14 C24 H24 62.9 65.8
H14 C14 C24 H24A 182.9 185.7
N16 C15 C14 H14 203.1 46.2
O28 C15 C14 C24 262.1 106.3
O28 C15 C14 H14 24.3 226.3
C18 C17 N16 HN16 38.3 95.1
C29 C17 C18 H17 239.9 240.0
C18 C17 C29 H29 58.7 295.0
C18 C17 C29 H29A 178.7 55.0
C29 C17 N16 HN16 275.2 335.1
C18 C17 C29 H17 116.7 120.0
C30 C29 C17 H29 240.0 240.1
C30 C29 C17 H29A 120.0 120.0
C17 C29 C30 C31 172.5 180.0
C17 C29 C30 H30 292.5 300.0
C17 C29 C30 H30A 52.5 60.0
H29 C29 C17 H29A 240.0 240.0
H17 C17 N16 HN16 155.0 215.0
H17 C17 C29 C30 182.0 55.0
H17 C17 C29 H29 302.0 175.0
H17 C17 C29 H29A 62.0 295.0
O19 C18 C17 H17 237.9 240.0
O20 C18 C17 H17 55.4 60.0
HO23 O23 P12 N13 122.6 304.9
C25 C24 C14 H14 302.9 305.7
C14 C24 C25 H24 120.0 120.0
C14 C24 C25 H24A 240.0 240.1
H24 C24 C25 H24A 120.0 120.1
C27 C25 C24 H25 117.9 239.9
C26 C25 C24 H25 240.7 120.0
C24 C25 C26 H26 180.0 184.1
C24 C25 C26 H26A 300.0 304.2
C24 C25 C26 H26B 60.0 64.2
H24 C24 C14 H14 62.9 65.8
C14 C24 H24 C25 237.7 240.0
C14 C24 H24 H24A 118.8 119.9
C25 C24 H24 H24A 241.2 239.9
H24 C24 C25 C26 71.6 306.9
H24 C24 C25 H25 191.0 187.0
H24A C24 C14 H14 182.9 185.7
C14 C24 H24A C25 122.4 120.0
C14 C24 H24A H24 241.2 240.1
C25 C24 H24A H24 118.8 120.1
H24A C24 C25 C26 311.6 186.9
H24A C24 C25 H25 71.0 66.9
C27 C25 C24 H24 308.9 66.9
C27 C25 C24 H24A 188.9 306.8
C24 C25 C27 H25 242.4 120.1
C26 C25 C27 H25 119.4 240.0
C27 C25 C26 H26 304.2 64.1
C27 C25 C26 H26A 64.1 184.2
C27 C25 C26 H26B 184.1 304.2
C26 C25 C24 H24 71.6 306.9
C26 C25 C24 H24A 311.6 186.9
C24 C25 C26 H25 117.8 240.0
C27 C25 C26 H25 241.9 120.0
H26 C26 C25 H26A 240.0 239.9
H26 C26 C25 H26B 120.0 119.9
H26A C26 C25 H26B 240.0 240.0
H25 C25 C24 H24 191.0 187.0
H25 C25 C24 H24A 71.0 66.9
C24 C25 H25 C26 240.3 120.0
H25 C25 C26 H26 62.2 304.1
H25 C25 C26 H26A 182.2 64.2
H25 C25 C26 H26B 302.2 184.2
H26 C26 C25 H25 62.2 304.1
C25 C26 H26 H26A 120.0 120.0
C25 C26 H26 H26B 240.0 240.1
H26A C26 H26 H26B 120.0 120.0
H26A C26 C25 H25 182.2 64.2
C25 C26 H26A H26 240.0 240.0
C25 C26 H26A H26B 120.0 120.0
H26 C26 H26A H26B 240.0 240.0
H26B C26 C25 H25 302.2 184.2
C25 C26 H26B H26 120.0 119.9
C25 C26 H26B H26A 240.0 240.0
H26 C26 H26B H26A 120.0 120.1
H27 C27 C25 H25 297.6 300.0
H27A C27 H27 H27B 120.0 120.0
H27A C27 C25 H25 57.6 59.9
H27 C27 H27A H27B 240.1 240.0
H27B C27 C25 H25 177.7 180.0
H27 C27 H27B H27A 120.0 119.9
C30 C29 C17 H17 182.0 55.0
C17 C29 C30 H29 120.0 120.0
C17 C29 C30 H29A 240.0 240.0
H29 C29 C30 H29A 120.0 120.0
C31 C30 C29 H30 240.0 240.0
C31 C30 C29 H30A 120.0 120.0
C29 C30 C31 H31 180.0 299.9
C29 C30 C31 H31A 300.0 60.0
C29 C30 C31 H31B 60.0 180.0
H30 C30 C29 H30A 240.0 240.0
H29 C29 C17 H17 302.0 175.0
C17 C29 H29 C30 237.7 240.0
C17 C29 H29 H29A 118.9 120.0
C30 C29 H29 H29A 241.2 240.0
H29 C29 C30 C31 52.5 60.0
H29 C29 C30 H30 172.5 180.0
H29 C29 C30 H30A 292.5 300.0
H29A C29 C17 H17 62.0 295.0
C17 C29 H29A C30 122.3 120.0
C17 C29 H29A H29 241.1 240.0
C30 C29 H29A H29 118.8 120.0
H29A C29 C30 C31 292.5 300.0
H29A C29 C30 H30 52.5 60.0
H29A C29 C30 H30A 172.5 180.0
C31 C30 C29 H29 52.5 60.0
C31 C30 C29 H29A 292.5 300.0
C29 C30 C31 H30 120.0 120.0
C29 C30 C31 H30A 240.0 240.0
H30 C30 C31 H30A 120.0 120.1
H31 C31 C30 H31A 240.0 239.9
H31 C31 C30 H31B 120.0 120.0
H31A C31 C30 H31B 240.0 240.0
H30 C30 C29 H29 172.5 180.0
H30 C30 C29 H29A 52.5 60.0
C29 C30 H30 C31 239.6 240.0
C29 C30 H30 H30A 119.8 120.0
C31 C30 H30 H30A 240.2 239.9
H30 C30 C31 H31 60.0 180.0
H30 C30 C31 H31A 180.0 300.0
H30 C30 C31 H31B 300.0 60.0
H30A C30 C29 H29 292.5 300.0
H30A C30 C29 H29A 172.5 180.0
C29 C30 H30A C31 120.4 120.0
C29 C30 H30A H30 240.2 240.0
C31 C30 H30A H30 119.8 120.0
H30A C30 C31 H31 300.0 59.9
H30A C30 C31 H31A 60.0 180.0
H30A C30 C31 H31B 180.0 300.0
H31 C31 C30 H30 60.0 180.0
H31 C31 C30 H30A 300.0 59.9
C30 C31 H31 H31A 120.0 120.1
C30 C31 H31 H31B 240.0 240.0
H31A C31 H31 H31B 120.0 119.9
H31A C31 C30 H30 180.0 300.0
H31A C31 C30 H30A 60.0 180.0
C30 C31 H31A H31 240.0 239.9
C30 C31 H31A H31B 120.0 120.0
H31 C31 H31A H31B 240.1 240.1
H31B C31 C30 H30 300.0 60.0
H31B C31 C30 H30A 180.0 300.0
C30 C31 H31B H31 120.0 120.0
C30 C31 H31B H31A 240.0 239.9
H31 C31 H31B H31A 120.0 119.9