PDB Chemical Component UBS
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for UBS
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C6 |
C1 |
1.391 |
1.383 |
| C1 |
C2 |
1.390 |
1.382 |
| C1 |
H1 |
1.080 |
1.080 |
| C3 |
C2 |
1.393 |
1.383 |
| C2 |
H2 |
1.080 |
1.080 |
| C4 |
C3 |
1.387 |
1.382 |
| C3 |
H3 |
1.080 |
1.080 |
| C5 |
C4 |
1.389 |
1.382 |
| C7 |
C4 |
1.511 |
1.507 |
| C5 |
C6 |
1.390 |
1.383 |
| C5 |
H5 |
1.079 |
1.080 |
| C6 |
H6 |
1.080 |
1.080 |
| O8 |
C7 |
1.429 |
1.453 |
| C7 |
H7 |
1.100 |
1.090 |
| C7 |
H7A |
1.100 |
1.091 |
| C9 |
O8 |
1.445 |
1.346 |
| N10 |
C9 |
1.330 |
1.349 |
| O21 |
C9 |
1.211 |
1.215 |
| C11 |
N10 |
1.456 |
1.465 |
| N10 |
HN10 |
1.000 |
0.969 |
| P12 |
C11 |
1.803 |
1.823 |
| C11 |
H11 |
1.100 |
1.090 |
| C11 |
H11A |
1.100 |
1.090 |
| N13 |
P12 |
1.670 |
1.683 |
| P12 |
O22 |
1.485 |
1.480 |
| P12 |
O23 |
1.508 |
1.611 |
| C14 |
N13 |
1.464 |
1.469 |
| N13 |
HN13 |
1.000 |
1.009 |
| C20 |
C14 |
1.526 |
1.530 |
| C14 |
C15 |
1.509 |
1.507 |
| C14 |
H14 |
1.100 |
1.090 |
| C15 |
O24 |
1.229 |
1.213 |
| C15 |
N16 |
1.325 |
1.348 |
| N16 |
C17 |
1.456 |
1.465 |
| N16 |
HN16 |
1.000 |
0.970 |
| C25 |
C17 |
1.535 |
1.529 |
| C17 |
C18 |
1.503 |
1.507 |
| C17 |
H17 |
1.100 |
1.090 |
| C18 |
O19 |
1.256 |
1.208 |
| C18 |
O32 |
1.239 |
1.342 |
| C21 |
C20 |
1.529 |
1.531 |
| C20 |
H20 |
1.100 |
1.090 |
| C20 |
H20A |
1.100 |
1.089 |
| C22 |
C21 |
1.527 |
1.530 |
| C21 |
C23 |
1.526 |
1.531 |
| C21 |
H21 |
1.099 |
1.090 |
| C22 |
H22 |
1.100 |
1.090 |
| C22 |
H22A |
1.100 |
1.091 |
| C22 |
H22B |
1.100 |
1.090 |
| C23 |
H23 |
1.100 |
1.090 |
| C23 |
H23A |
1.100 |
1.090 |
| C23 |
H23B |
1.100 |
1.090 |
| O23 |
HO23 |
0.950 |
0.966 |
| C26 |
C25 |
1.523 |
1.530 |
| C31 |
C25 |
1.522 |
1.530 |
| C25 |
H25 |
1.100 |
1.090 |
| C26 |
H26 |
1.100 |
1.090 |
| C26 |
H26A |
1.100 |
1.090 |
| C26 |
H26B |
1.100 |
1.090 |
| C31 |
H31 |
1.100 |
1.091 |
| C31 |
H31A |
1.100 |
1.090 |
| C31 |
H31B |
1.100 |
1.091 |
| O32 |
HO32 |
0.950 |
0.967 |
Bond Angles for UBS
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C6 |
C1 |
H1 |
120.0 |
120.0 |
| C1 |
C2 |
H2 |
120.0 |
120.0 |
| C3 |
C2 |
H2 |
120.0 |
120.0 |
| C2 |
C3 |
H3 |
120.1 |
120.0 |
| C4 |
C3 |
H3 |
120.1 |
120.0 |
| C4 |
C5 |
H5 |
120.1 |
120.0 |
| C5 |
C6 |
H6 |
120.0 |
120.0 |
| O8 |
C7 |
H7 |
109.8 |
109.5 |
| O8 |
C7 |
H7A |
109.8 |
109.5 |
| H7 |
C7 |
H7A |
109.1 |
109.5 |
| C11 |
N10 |
HN10 |
117.2 |
120.0 |
| P12 |
C11 |
H11 |
109.0 |
109.4 |
| P12 |
C11 |
H11A |
109.0 |
109.4 |
| H11 |
C11 |
H11A |
109.9 |
109.5 |
| O22 |
P12 |
O23 |
115.1 |
109.5 |
| P12 |
O23 |
HO23 |
109.5 |
114.0 |
| C14 |
N13 |
HN13 |
105.5 |
111.0 |
| C20 |
C14 |
H14 |
114.1 |
109.5 |
| C15 |
C14 |
H14 |
105.1 |
109.5 |
| C14 |
C15 |
O24 |
120.2 |
120.0 |
| C14 |
C15 |
N16 |
117.5 |
120.0 |
| O24 |
C15 |
N16 |
122.4 |
120.0 |
| C15 |
N16 |
C17 |
118.4 |
120.0 |
| C15 |
N16 |
HN16 |
120.8 |
120.0 |
| C17 |
N16 |
HN16 |
120.8 |
120.0 |
| N16 |
C17 |
C18 |
110.2 |
109.4 |
| N16 |
C17 |
H17 |
108.4 |
109.5 |
| C25 |
C17 |
H17 |
107.7 |
109.5 |
| C18 |
C17 |
H17 |
108.5 |
109.5 |
| C17 |
C18 |
O19 |
121.3 |
120.0 |
| C17 |
C18 |
O32 |
116.0 |
120.0 |
| O19 |
C18 |
O32 |
122.7 |
120.0 |
| C18 |
O32 |
HO32 |
109.5 |
117.0 |
| C21 |
C20 |
H20 |
108.4 |
109.5 |
| C21 |
C20 |
H20A |
108.4 |
109.5 |
| H20 |
C20 |
H20A |
110.5 |
109.5 |
| C22 |
C21 |
C23 |
110.4 |
109.5 |
| C22 |
C21 |
H21 |
109.5 |
109.5 |
| C23 |
C21 |
H21 |
107.0 |
109.5 |
| C21 |
C23 |
H23 |
109.5 |
109.5 |
| C21 |
C23 |
H23A |
109.4 |
109.4 |
| C21 |
C23 |
H23B |
109.5 |
109.5 |
| H22 |
C22 |
H22A |
109.4 |
109.4 |
| H22 |
C22 |
H22B |
109.5 |
109.5 |
| H22A |
C22 |
H22B |
109.5 |
109.4 |
| H23 |
C23 |
H23A |
109.5 |
109.5 |
| H23 |
C23 |
H23B |
109.5 |
109.5 |
| H23A |
C23 |
H23B |
109.5 |
109.5 |
| C26 |
C25 |
H25 |
107.2 |
109.5 |
| C31 |
C25 |
H25 |
107.4 |
109.5 |
| H26 |
C26 |
H26A |
109.5 |
109.5 |
| H26 |
C26 |
H26B |
109.4 |
109.5 |
| H26A |
C26 |
H26B |
109.5 |
109.4 |
| H31 |
C31 |
H31A |
109.5 |
109.4 |
| H31 |
C31 |
H31B |
109.5 |
109.5 |
| H31A |
C31 |
H31B |
109.5 |
109.5 |
Torsion Angles for UBS
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C6 |
C1 |
C2 |
H2 |
180.9 |
180.0 |
| C3 |
C2 |
C1 |
H2 |
180.0 |
180.0 |
| C1 |
C2 |
C3 |
H3 |
179.2 |
180.1 |
| H1 |
C1 |
C2 |
H2 |
0.8 |
0.1 |
| C1 |
C2 |
C3 |
H2 |
180.0 |
180.0 |
| C4 |
C3 |
C2 |
H3 |
180.0 |
180.2 |
| H2 |
C2 |
C3 |
H3 |
359.2 |
0.0 |
| C4 |
C3 |
C2 |
H2 |
179.2 |
180.3 |
| C2 |
C3 |
C4 |
H3 |
180.0 |
179.8 |
| H3 |
C3 |
C2 |
H2 |
359.2 |
0.0 |
| C5 |
C4 |
C3 |
H3 |
180.5 |
179.6 |
| C4 |
C5 |
C6 |
H6 |
180.2 |
179.7 |
| C7 |
C4 |
C3 |
H3 |
0.4 |
0.2 |
| C7 |
C4 |
C5 |
H5 |
359.9 |
359.4 |
| C5 |
C6 |
C1 |
H1 |
179.5 |
180.0 |
| H5 |
C5 |
C6 |
H6 |
0.2 |
0.3 |
| H6 |
C6 |
C1 |
H1 |
359.5 |
359.9 |
| H7 |
C7 |
O8 |
H7A |
120.0 |
120.0 |
| O8 |
C7 |
H7 |
H7A |
239.6 |
240.0 |
| O8 |
C7 |
H7A |
H7 |
120.4 |
120.0 |
| C9 |
O8 |
C7 |
H7 |
11.6 |
60.0 |
| C9 |
O8 |
C7 |
H7A |
251.6 |
300.0 |
| P12 |
C11 |
N10 |
HN10 |
332.2 |
275.1 |
| H11 |
C11 |
P12 |
H11A |
120.0 |
120.0 |
| H11 |
C11 |
N10 |
HN10 |
92.2 |
35.0 |
| P12 |
C11 |
H11 |
H11A |
240.5 |
240.0 |
| H11A |
C11 |
N10 |
HN10 |
212.2 |
155.1 |
| P12 |
C11 |
H11A |
H11 |
119.5 |
119.9 |
| N13 |
P12 |
C11 |
H11 |
44.5 |
60.0 |
| N13 |
P12 |
C11 |
H11A |
284.5 |
300.0 |
| N13 |
P12 |
O23 |
HO23 |
234.8 |
60.0 |
| O22 |
P12 |
C11 |
H11 |
286.3 |
300.0 |
| O22 |
P12 |
C11 |
H11A |
166.3 |
180.0 |
| O22 |
P12 |
O23 |
HO23 |
0.0 |
180.0 |
| O23 |
P12 |
C11 |
H11 |
158.8 |
180.0 |
| O23 |
P12 |
C11 |
H11A |
38.8 |
60.0 |
| C20 |
C14 |
N13 |
HN13 |
39.5 |
331.1 |
| C15 |
C14 |
C20 |
H14 |
117.4 |
120.0 |
| C20 |
C14 |
C15 |
N16 |
81.9 |
286.3 |
| C15 |
C14 |
N13 |
HN13 |
159.2 |
91.1 |
| C20 |
C14 |
C15 |
H14 |
237.1 |
240.0 |
| O24 |
C15 |
C14 |
N16 |
178.6 |
180.0 |
| C14 |
C15 |
N16 |
C17 |
178.4 |
185.2 |
| C14 |
C15 |
N16 |
HN16 |
358.4 |
5.1 |
| H14 |
C14 |
N13 |
HN13 |
276.6 |
211.1 |
| H14 |
C14 |
C15 |
O24 |
23.4 |
226.3 |
| H14 |
C14 |
C15 |
N16 |
204.8 |
46.3 |
| O24 |
C15 |
C14 |
H14 |
23.4 |
226.3 |
| C14 |
C15 |
O24 |
N16 |
181.5 |
180.0 |
| O24 |
C15 |
N16 |
C17 |
359.8 |
5.2 |
| O24 |
C15 |
N16 |
HN16 |
179.8 |
185.1 |
| N16 |
C15 |
C14 |
H14 |
204.8 |
46.3 |
| C14 |
C15 |
N16 |
O24 |
178.6 |
180.0 |
| C17 |
N16 |
C15 |
HN16 |
180.0 |
180.1 |
| C15 |
N16 |
C17 |
C18 |
227.7 |
205.0 |
| C15 |
N16 |
C17 |
H17 |
346.3 |
324.9 |
| C15 |
N16 |
C17 |
HN16 |
180.0 |
179.9 |
| C25 |
C17 |
N16 |
H17 |
118.1 |
120.1 |
| C18 |
C17 |
N16 |
H17 |
241.4 |
240.1 |
| N16 |
C17 |
C18 |
O19 |
347.4 |
360.0 |
| N16 |
C17 |
C18 |
O32 |
166.0 |
180.0 |
| C15 |
N16 |
HN16 |
C17 |
180.0 |
180.1 |
| HN16 |
N16 |
C17 |
C18 |
47.7 |
25.1 |
| HN16 |
N16 |
C17 |
H17 |
166.3 |
145.0 |
| C25 |
C17 |
N16 |
HN16 |
284.4 |
265.1 |
| N16 |
C17 |
C25 |
H17 |
241.5 |
240.0 |
| C18 |
C17 |
C25 |
H17 |
118.6 |
120.0 |
| C25 |
C17 |
C18 |
O32 |
289.3 |
300.0 |
| C18 |
C17 |
N16 |
HN16 |
47.7 |
25.1 |
| N16 |
C17 |
C18 |
H17 |
118.6 |
119.9 |
| C25 |
C17 |
C18 |
H17 |
241.9 |
240.0 |
| O19 |
C18 |
C17 |
O32 |
181.4 |
180.0 |
| C17 |
C18 |
O32 |
HO32 |
181.4 |
180.0 |
| H17 |
C17 |
N16 |
HN16 |
166.3 |
145.0 |
| N16 |
C17 |
H17 |
C18 |
240.3 |
240.1 |
| H17 |
C17 |
C18 |
O19 |
228.8 |
240.0 |
| H17 |
C17 |
C18 |
O32 |
47.4 |
60.0 |
| O19 |
C18 |
C17 |
H17 |
228.8 |
240.0 |
| C17 |
C18 |
O19 |
O32 |
178.5 |
180.0 |
| O19 |
C18 |
O32 |
HO32 |
0.0 |
0.1 |
| O32 |
C18 |
C17 |
H17 |
47.4 |
60.0 |
| C17 |
C18 |
O32 |
O19 |
181.4 |
180.0 |
| C21 |
C20 |
C14 |
H14 |
304.8 |
305.6 |
| H20 |
C20 |
C21 |
H20A |
120.0 |
120.0 |
| H20 |
C20 |
C14 |
H14 |
64.8 |
65.6 |
| C21 |
C20 |
H20 |
H20A |
241.3 |
240.0 |
| H20A |
C20 |
C14 |
H14 |
184.8 |
185.6 |
| C21 |
C20 |
H20A |
H20 |
118.7 |
120.0 |
| C22 |
C21 |
C20 |
H20 |
73.1 |
307.0 |
| C22 |
C21 |
C20 |
H20A |
313.1 |
187.0 |
| C23 |
C21 |
C22 |
H21 |
242.5 |
120.1 |
| C22 |
C21 |
C23 |
H23 |
56.6 |
180.0 |
| C22 |
C21 |
C23 |
H23A |
176.6 |
300.0 |
| C22 |
C21 |
C23 |
H23B |
296.6 |
59.9 |
| C23 |
C21 |
C20 |
H20 |
309.5 |
67.0 |
| C23 |
C21 |
C20 |
H20A |
189.5 |
307.0 |
| C22 |
C21 |
C23 |
H21 |
119.0 |
239.9 |
| H23 |
C23 |
C21 |
H23A |
240.0 |
240.0 |
| H23 |
C23 |
C21 |
H23B |
120.0 |
120.1 |
| H23A |
C23 |
C21 |
H23B |
240.0 |
240.0 |
| H21 |
C21 |
C20 |
H20 |
192.1 |
187.0 |
| H21 |
C21 |
C20 |
H20A |
72.2 |
67.0 |
| C22 |
C21 |
H21 |
C23 |
240.4 |
120.0 |
| H21 |
C21 |
C23 |
H23 |
297.5 |
300.1 |
| H21 |
C21 |
C23 |
H23A |
57.6 |
60.0 |
| H21 |
C21 |
C23 |
H23B |
177.5 |
180.0 |
| H22 |
C22 |
C21 |
C23 |
304.8 |
184.2 |
| H22 |
C22 |
C21 |
H21 |
62.3 |
64.2 |
| H22A |
C22 |
H22 |
H22B |
120.0 |
119.9 |
| H22A |
C22 |
C21 |
C23 |
64.8 |
304.2 |
| H22A |
C22 |
C21 |
H21 |
182.3 |
184.2 |
| H22 |
C22 |
H22A |
H22B |
240.0 |
240.1 |
| H22B |
C22 |
C21 |
C23 |
184.8 |
64.2 |
| H22B |
C22 |
C21 |
H21 |
302.3 |
304.1 |
| H22 |
C22 |
H22B |
H22A |
120.0 |
119.9 |
| H23 |
C23 |
C21 |
H21 |
297.5 |
300.1 |
| C21 |
C23 |
H23 |
H23A |
120.0 |
119.9 |
| C21 |
C23 |
H23 |
H23B |
240.0 |
240.0 |
| H23A |
C23 |
H23 |
H23B |
120.0 |
120.0 |
| H23A |
C23 |
C21 |
H21 |
57.6 |
60.0 |
| C21 |
C23 |
H23A |
H23 |
240.0 |
240.1 |
| C21 |
C23 |
H23A |
H23B |
120.0 |
120.0 |
| H23 |
C23 |
H23A |
H23B |
240.0 |
239.9 |
| H23B |
C23 |
C21 |
H21 |
177.5 |
180.0 |
| C21 |
C23 |
H23B |
H23 |
120.0 |
120.0 |
| C21 |
C23 |
H23B |
H23A |
240.0 |
240.1 |
| H23 |
C23 |
H23B |
H23A |
120.0 |
120.1 |
| C26 |
C25 |
C17 |
H17 |
51.5 |
300.0 |
| C31 |
C25 |
C26 |
H25 |
117.1 |
120.0 |
| C31 |
C25 |
C17 |
H17 |
177.6 |
60.0 |
| C26 |
C25 |
C31 |
H25 |
243.0 |
240.0 |
| H25 |
C25 |
C17 |
H17 |
294.6 |
180.0 |
| H26 |
C26 |
C25 |
H25 |
296.2 |
180.0 |
| H26A |
C26 |
H26 |
H26B |
120.0 |
120.0 |
| H26A |
C26 |
C25 |
H25 |
56.2 |
300.1 |
| H26 |
C26 |
H26A |
H26B |
240.0 |
240.0 |
| H26B |
C26 |
C25 |
H25 |
176.2 |
60.0 |
| H26 |
C26 |
H26B |
H26A |
120.0 |
120.0 |
| H31 |
C31 |
C25 |
H25 |
63.8 |
300.0 |
| H31A |
C31 |
H31 |
H31B |
120.0 |
120.0 |
| H31A |
C31 |
C25 |
H25 |
183.8 |
60.0 |
| H31 |
C31 |
H31A |
H31B |
240.0 |
240.0 |
| H31B |
C31 |
C25 |
H25 |
303.8 |
179.9 |
| H31 |
C31 |
H31B |
H31A |
120.0 |
120.0 |