PDB Chemical Component UBA

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for UBA

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
OXT	C	1.270	1.208
C	O	1.258	1.342
C	CA	1.490	1.507
O	HO	0.950	0.967
CA	N	1.456	1.469
CA	CB	1.551	1.530
CA	HA	1.100	1.090
N	HN1	1.000	1.009
N	HN2	1.000	1.009
CB	N4	1.452	1.465
CB	HB1	1.100	1.090
CB	HB2	1.100	1.090
N4	C5	1.410	1.346
N4	C3	1.347	1.368
C5	O8	1.234	1.216
C5	N6	1.385	1.345
N6	C1	1.384	1.349
N6	C17	1.446	1.465
C1	O7	1.225	1.218
C1	C2	1.475	1.416
C2	C6	1.521	1.507
C2	C3	1.393	1.351
C6	H61	1.100	1.089
C6	H62	1.100	1.090
C6	H63	1.100	1.090
C3	H3	1.080	1.080
C17	C18	1.474	1.507
C17	H171	1.100	1.090
C17	H172	1.100	1.091
C18	C23	1.402	1.372
C18	C19	1.464	1.387
C23	C22	1.401	1.360
C23	H23	1.080	1.080
C22	S20	1.747	1.733
C22	H22	1.080	1.080
S20	C19	1.718	1.784
C19	C10	1.479	1.464
C10	O2	1.259	1.349
C10	O1	1.245	1.216
O2	HO2	0.950	0.967

Bond Angles for UBA

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
OXT	C	O	120.4	120.0
OXT	C	CA	118.2	120.0
O	C	CA	121.4	120.0
C	O	HO	109.5	120.0
C	CA	N	108.5	109.4
C	CA	CB	107.9	109.5
C	CA	HA	112.6	109.5
N	CA	CB	113.3	109.4
N	CA	HA	107.0	109.5
CA	N	HN1	109.5	106.7
CA	N	HN2	109.5	106.7
CB	CA	HA	107.7	109.5
CA	CB	N4	106.0	109.5
CA	CB	HB1	111.4	109.5
CA	CB	HB2	110.6	109.5
HN1	N	HN2	109.5	106.7
N4	CB	HB1	111.4	109.4
N4	CB	HB2	110.6	109.5
CB	N4	C5	115.6	119.7
CB	N4	C3	123.2	119.7
HB1	CB	HB2	106.9	109.5
C5	N4	C3	121.2	120.6
N4	C5	O8	118.6	119.5
N4	C5	N6	119.1	120.9
N4	C3	C2	122.6	119.7
N4	C3	H3	118.7	120.1
O8	C5	N6	122.2	119.6
C5	N6	C1	121.0	120.3
C5	N6	C17	122.5	119.9
C1	N6	C17	116.5	119.8
N6	C1	O7	119.0	120.3
N6	C1	C2	119.6	119.3
N6	C17	C18	110.7	109.5
N6	C17	H171	108.8	109.5
N6	C17	H172	109.1	109.4
O7	C1	C2	121.4	120.3
C1	C2	C6	119.3	120.4
C1	C2	C3	116.5	119.1
C6	C2	C3	124.2	120.4
C2	C6	H61	109.5	109.5
C2	C6	H62	109.5	109.4
C2	C6	H63	109.5	109.5
C2	C3	H3	118.7	120.2
H61	C6	H62	109.5	109.5
H61	C6	H63	109.4	109.5
H62	C6	H63	109.5	109.4
C18	C17	H171	108.8	109.5
C18	C17	H172	109.0	109.5
C17	C18	C23	129.7	121.5
C17	C18	C19	117.7	121.4
H171	C17	H172	110.4	109.5
C23	C18	C19	112.6	117.1
C18	C23	C22	115.6	119.2
C18	C23	H23	122.2	120.4
C18	C19	S20	108.0	101.8
C18	C19	C10	128.6	129.1
C22	C23	H23	122.2	120.4
C23	C22	S20	108.0	103.2
C23	C22	H22	126.0	128.4
S20	C22	H22	126.0	128.4
C22	S20	C19	95.8	98.7
S20	C19	C10	123.4	129.1
C19	C10	O2	121.4	120.0
C19	C10	O1	114.3	120.0
O2	C10	O1	124.3	120.0
C10	O2	HO2	109.5	120.0

Torsion Angles for UBA

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O	C	OXT	CA	180.7	180.0
OXT	C	O	HO	0.0	0.0
OXT	C	CA	N	359.7	340.0
OXT	C	CA	CB	122.8	99.9
OXT	C	CA	HA	241.5	220.0
OXT	C	O	CA	179.3	180.0
O	C	CA	N	179.0	160.0
O	C	CA	CB	302.1	280.0
O	C	CA	HA	60.7	40.1
OXT	C	CA	O	180.7	180.0
CA	C	O	HO	180.7	180.0
N	CA	C	CB	236.9	240.0
N	CA	C	HA	118.2	120.0
C	CA	N	HN1	219.1	306.2
C	CA	N	HN2	99.1	60.0
CB	CA	C	HA	241.3	239.9
C	CA	CB	N4	189.3	185.0
C	CA	CB	HB1	68.0	65.1
C	CA	CB	HB2	309.3	305.0
HO	O	C	CA	180.7	180.0
C	CA	N	CB	119.8	120.0
C	CA	N	HA	238.3	240.0
CB	CA	N	HA	118.5	120.0
N	CA	CB	N4	309.5	305.0
N	CA	CB	HB1	188.2	185.0
N	CA	CB	HB2	69.5	65.0
HN1	N	CA	HN2	120.0	246.2
C	CA	CB	N	239.9	240.0
C	CA	CB	HA	121.7	120.1
N	CA	CB	HA	241.9	240.0
CB	CA	N	HN1	99.3	186.2
CB	CA	N	HN2	339.3	300.0
N4	CB	CA	HB1	121.3	120.0
N4	CB	CA	HB2	240.0	240.0
CA	CB	N4	C5	281.9	270.1
CA	CB	N4	C3	101.8	90.0
HB1	CB	CA	HB2	118.7	120.1
C	CA	HA	N	119.1	120.0
C	CA	HA	CB	241.2	239.9
N	CA	HA	CB	122.1	120.0
HA	CA	N	HN1	340.8	66.2
HA	CA	N	HN2	220.8	180.0
HA	CA	CB	N4	67.6	65.0
HA	CA	CB	HB1	306.3	305.0
HA	CA	CB	HB2	187.6	185.0
HN1	N	CA	CB	99.3	186.2
HN1	N	CA	HA	340.8	66.2
CA	N	HN1	HN2	240.0	113.8
HN2	N	CA	CB	339.3	300.0
HN2	N	CA	HA	220.8	180.0
CA	N	HN2	HN1	120.0	246.2
N4	CB	CA	HA	67.6	65.0
CA	CB	N4	HB1	238.7	240.0
CA	CB	N4	HB2	120.0	120.0
HB1	CB	N4	HB2	241.3	240.0
C5	N4	CB	C3	180.1	180.0
CB	N4	C5	O8	358.6	360.0
CB	N4	C5	N6	178.2	180.0
CB	N4	C3	C2	181.9	180.0
CB	N4	C3	H3	1.9	0.0
HB1	CB	CA	HA	306.3	305.0
CA	CB	HB1	N4	118.1	120.0
CA	CB	HB1	HB2	239.1	240.0
N4	CB	HB1	HB2	120.9	120.0
HB1	CB	N4	C5	43.2	30.0
HB1	CB	N4	C3	223.1	210.0
HB2	CB	CA	HA	187.6	185.0
CA	CB	HB2	N4	242.8	240.0
CA	CB	HB2	HB1	121.4	120.0
N4	CB	HB2	HB1	238.6	240.0
HB2	CB	N4	C5	161.9	150.0
HB2	CB	N4	C3	341.8	330.0
C5	N4	CB	HB1	43.2	30.0
C5	N4	CB	HB2	161.9	150.0
CB	N4	C5	C3	179.9	180.0
C5	N4	C3	C2	1.8	359.9
C5	N4	C3	H3	181.8	180.0
O8	C5	N4	N6	180.4	180.0
N4	C5	N6	C1	1.5	359.8
N4	C5	N6	C17	183.3	180.0
C3	N4	CB	HB1	223.1	210.0
C3	N4	CB	HB2	341.8	330.0
CB	N4	C3	C5	180.1	180.0
C3	N4	C5	O8	178.7	180.0
C3	N4	C5	N6	358.3	0.0
C1	C2	C3	N4	358.5	0.3
C6	C2	C3	N4	179.9	180.0
C2	C3	N4	H3	180.0	179.9
O8	C5	N4	C3	178.7	180.0
N4	C5	O8	N6	179.6	180.0
O8	C5	N6	C1	181.1	179.8
O8	C5	N6	C17	2.9	0.0
N6	C5	N4	C3	358.3	0.0
N4	C5	N6	O8	180.4	180.0
C1	N6	C5	C17	178.2	179.7
C5	N6	C1	O7	180.6	180.0
C5	N6	C1	C2	358.6	0.5
C5	N6	C17	C18	286.7	86.4
C5	N6	C17	H171	167.2	206.4
C5	N6	C17	H172	46.7	326.4
C5	N6	C1	C17	181.7	180.3
C1	N6	C17	C18	108.4	266.6
C1	N6	C17	H171	348.9	26.6
C1	N6	C17	H172	228.4	146.7
O7	C1	N6	C2	181.9	179.5
N6	C1	C2	C6	179.9	179.8
N6	C1	C2	C3	1.3	359.5
C5	N6	C17	C1	178.3	179.7
C17	N6	C1	O7	358.9	359.7
C17	N6	C1	C2	177.0	180.2
C18	C17	N6	H171	119.5	240.0
C18	C17	N6	H172	240.0	120.0
N6	C17	C18	C23	339.7	5.8
N6	C17	C18	C19	161.2	185.5
H171	C17	N6	H172	120.5	240.0
O7	C1	N6	C17	358.9	359.7
N6	C1	O7	C2	178.0	180.5
O7	C1	C2	C6	357.9	0.3
O7	C1	C2	C3	179.3	180.0
N4	C3	C2	C1	358.5	0.3
C2	C1	N6	C17	177.0	180.2
N6	C1	C2	O7	182.0	179.5
C6	C2	C1	C3	178.6	180.3
C1	C2	C6	H61	143.5	269.7
C1	C2	C6	H62	23.5	29.8
C1	C2	C6	H63	263.5	149.7
C1	C2	C3	H3	178.4	180.2
N4	C3	C2	C6	179.9	180.0
C1	C2	C6	C3	181.5	179.7
C6	C2	C3	H3	359.9	360.0
H61	C6	C2	H62	120.0	240.0
H61	C6	C2	H63	240.0	120.1
H62	C6	C2	H63	120.0	240.1
N4	C3	C2	H3	180.0	180.1
C1	C2	C3	C6	178.5	180.3
C3	C2	C6	H61	321.9	90.0
C3	C2	C6	H62	201.9	210.0
C3	C2	C6	H63	81.9	329.9
H61	C6	C2	C3	321.9	90.0
C2	C6	H61	H62	240.0	120.0
C2	C6	H61	H63	120.0	240.0
H62	C6	H61	H63	240.0	120.0
H62	C6	C2	C3	201.9	210.0
C2	C6	H62	H61	120.0	240.0
C2	C6	H62	H63	240.0	119.9
H61	C6	H62	H63	120.0	240.0
H63	C6	C2	C3	81.9	329.9
C2	C6	H63	H61	240.0	120.1
C2	C6	H63	H62	120.0	240.1
H61	C6	H63	H62	240.0	120.0
N4	C3	H3	C2	180.0	179.9
N6	C17	C18	H171	240.5	120.0
N6	C17	C18	H172	120.0	240.1
H171	C17	C18	H172	239.5	120.0
C23	C18	C17	C19	178.5	180.3
C17	C18	C23	C22	181.1	180.0
C17	C18	C23	H23	1.1	359.9
C17	C18	C19	S20	179.1	179.9
C17	C18	C19	C10	358.7	0.2
N6	C17	H171	C18	120.7	240.0
N6	C17	H171	H172	240.3	120.0
C18	C17	H171	H172	119.6	240.0
H171	C17	C18	C23	99.2	245.7
H171	C17	C18	C19	280.7	65.5
N6	C17	H172	C18	239.0	120.0
N6	C17	H172	H171	119.5	240.0
C18	C17	H172	H171	240.5	120.0
H172	C17	C18	C23	219.7	125.7
H172	C17	C18	C19	41.2	305.4
C23	C18	C17	H171	99.2	245.7
C23	C18	C17	H172	219.7	125.7
C17	C18	C23	C19	181.4	179.7
C23	C18	C19	S20	0.4	359.7
C23	C18	C19	C10	179.9	179.9
C22	C23	C18	H23	180.0	180.1
C18	C23	C22	S20	0.2	360.0
C18	C23	C22	H22	180.2	179.9
C19	C18	C17	H171	280.7	65.5
C19	C18	C17	H172	41.2	305.4
C17	C18	C19	C23	178.8	180.3
C19	C18	C23	C22	359.6	0.3
C19	C18	C23	H23	179.6	180.2
C22	S20	C19	C18	359.8	0.3
S20	C19	C18	C10	180.4	179.8
C18	C19	C10	O2	24.8	184.9
C18	C19	C10	O1	202.2	5.0
C22	C23	C18	C19	359.6	0.3
C18	C23	C22	H23	180.0	179.9
S20	C22	C23	H22	180.0	180.0
C23	C22	S20	C19	0.0	359.9
H23	C23	C18	C19	179.6	180.2
C18	C23	H23	C22	180.0	180.1
H23	C23	C22	S20	180.2	180.1
H23	C23	C22	H22	0.2	0.0
C18	C19	S20	C22	359.8	0.3
S20	C22	C23	H23	180.2	180.1
C23	C22	S20	H22	180.0	180.0
C22	S20	C19	C10	180.2	180.0
H22	C22	C23	H23	0.2	0.0
C23	C22	H22	S20	180.0	180.0
H22	C22	S20	C19	180.0	179.9
C18	C19	S20	C10	179.6	180.2
C19	S20	C22	H22	180.0	179.9
S20	C19	C10	O2	204.3	5.2
S20	C19	C10	O1	21.7	185.3
C18	C19	C10	S20	180.5	179.7
O2	C10	C19	O1	182.5	179.9
C19	C10	O2	HO2	177.2	180.0
C19	C10	O2	O1	177.2	180.1
C19	C10	O1	O2	182.6	179.9
O1	C10	O2	HO2	0.0	360.0
HO2	O2	C10	O1	0.0	360.0