PDB Chemical Component UAP

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for UAP

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O2 S 1.736 1.523
S O2S 1.444 1.421
S O3S 1.437 1.421
S O1S 1.422 1.522
O5 C1 1.432 1.430
O1 C1 1.412 1.429
C1 C2 1.500 1.535
C1 H1 1.100 1.090
O1 HO1 0.950 0.967
C3 C2 1.531 1.533
C2 O2 1.400 1.429
C2 H2 1.101 1.090
C4 C3 1.429 1.505
O3 C3 1.404 1.429
C3 H3 1.100 1.089
O3 HO3 0.950 0.967
C5 C4 1.326 1.324
C4 H4 1.080 1.080
C6 C5 1.318 1.473
C5 O5 1.355 1.356
O6A C6 1.234 1.215
O6B C6 1.233 1.348
O1S HO1S 0.949 0.967
O6B HO6B 0.949 0.967

Bond Angles for UAP

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O2 S O2S 107.6 106.4
O2 S O3S 109.1 106.4
O2 S O1S 107.8 107.2
O2S S O3S 113.1 123.2
O1S S O2S 111.5 106.4
O1S S O3S 107.6 106.4
S O1S HO1S 109.5 114.0
O5 C1 H1 110.7 109.7
O1 C1 C2 104.2 109.7
O1 C1 H1 111.0 109.7
C2 C1 H1 109.7 109.7
C1 C2 O2 104.1 109.7
C1 C2 H2 110.7 109.7
C3 C2 H2 110.3 109.7
O2 C2 H2 112.3 109.7
C4 C3 H3 108.2 109.5
O3 C3 H3 108.5 109.5
C5 C4 H4 119.0 118.9

Torsion Angles for UAP

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O2S S O2 O3S 123.0 227.1
O1S S O2 O2S 120.4 246.5
O1S S O2 O3S 243.4 113.6
O2 S O1S HO1S 117.5 180.0
O2 S O2S O3S 239.5 123.0
O2 S O2S O1S 118.0 245.9
O1S S O2S O3S 121.5 237.0
O2S S O1S HO1S 235.4 66.5
O2 S O3S O2S 119.7 237.1
O2 S O3S O1S 243.3 114.1
O1S S O3S O2S 236.4 123.0
O3S S O1S HO1S 360.0 293.5
O2 S O1S O2S 242.1 113.5
O2 S O1S O3S 117.5 246.4
O2S S O1S O3S 235.4 132.9
O1 C1 O5 H1 125.1 120.6
C2 C1 O5 H1 239.9 240.3
O5 C1 C2 H2 179.3 303.3
O5 C1 O1 H1 235.1 239.5
C2 C1 O1 H1 118.0 120.6
O1 C1 C2 O2 178.7 302.4
O1 C1 C2 H2 299.7 63.0
O5 C1 C2 H1 120.8 119.7
O1 C1 C2 H1 241.1 239.4
C3 C2 C1 H2 123.1 119.7
O2 C2 C1 H2 239.0 239.4
O1 C1 H1 C2 114.6 120.6
H1 C1 C2 O2 297.6 62.9
H1 C1 C2 H2 58.5 183.6
HO1 O1 C1 C2 62.9 180.0
HO1 O1 C1 H1 304.9 59.4
C3 C2 C1 H1 181.7 303.3
C1 C2 C3 H2 236.6 240.3
O2 C2 C3 H2 123.0 120.6
C2 O2 S O2S 176.4 188.6
C2 O2 S O3S 53.4 321.5
C2 O2 S O1S 296.7 75.0
O2 C2 C1 H1 297.6 62.9
C1 C2 O2 H2 119.9 120.6
C3 C2 O2 H2 238.2 239.4
H2 C2 C1 H1 58.5 183.6
C1 C2 H2 O2 244.0 239.4
C4 C3 C2 H2 165.6 72.5
O3 C3 C4 H3 242.5 239.9
O3 C3 C2 H2 43.2 312.5
C4 C3 O3 H3 117.3 120.1
H3 C3 C2 H2 283.7 192.5
HO3 O3 C3 H3 298.6 300.0
C5 C4 C3 H3 230.3 257.6
H4 C4 C3 H3 50.3 77.6
C6 C5 C4 H4 352.6 359.6
C5 O5 C1 H1 164.6 71.9
O5 C5 C4 H4 177.9 179.7
HO1S O1S S O2S 235.4 66.5
HO1S O1S S O3S 360.0 293.5