PDB Chemical Component U49

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for U49

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.423	1.401
C1	C3	1.447	1.423
C1	C4	1.402	1.403
C2	N5	1.432	1.389
C2	C6	1.440	1.391
C3	C7	1.426	1.404
C3	C8	1.429	1.403
C4	C9	1.404	1.364
C4	H41	1.104	1.080
N5	C10	1.477	1.480
N5	C11	1.404	1.337
C6	C12	1.421	1.388
C6	H61	1.104	1.081
C7	C13	1.425	1.351
C7	H71	1.103	1.082
C8	C12	1.422	1.358
C8	H81	1.103	1.079
C9	C13	1.419	1.414
C9	O14	1.424	1.320
C10	C15	1.536	1.544
C10	H101	1.115	1.090
C10	H102	1.115	1.087
C11	C17	1.483	1.513
C11	O39	1.196	1.215
C12	H121	1.103	1.080
C13	H131	1.103	1.080
O14	C18	1.433	1.308
C15	C17	1.528	1.552
C15	H151	1.115	1.091
C15	H152	1.115	1.090
C17	N54	1.409	1.482
C17	H171	1.115	1.083
C18	C20	1.437	1.422
C18	C21	1.412	1.382
C20	C23	1.419	1.389
C20	C24	1.444	1.433
C21	C25	1.431	1.383
C21	H211	1.103	1.081
C22	C26	1.488	1.504
C22	N54	1.444	1.471
C22	H221	1.115	1.086
C22	H222	1.115	1.088
C23	C27	1.428	1.374
C23	H231	1.103	1.082
C24	N28	1.145	1.136
C25	C27	1.425	1.382
C25	C29	1.526	1.505
C26	N30	1.380	1.366
C26	C31	1.379	1.342
C27	H271	1.103	1.080
C29	N30	1.468	1.466
C29	H291	1.115	1.090
C29	H292	1.115	1.088
N30	C32	1.360	1.348
C31	N33	1.356	1.340
C31	H311	1.103	1.081
C32	N33	1.322	1.309
C32	H321	1.103	1.079
N54	H541	1.020	1.041

Bond Angles for U49

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C3	120.2	117.8
C2	C1	C4	122.1	123.7
C1	C2	N5	115.8	126.5
C1	C2	C6	119.4	119.2
C3	C1	C4	117.7	118.5
C1	C3	C7	119.6	119.8
C1	C3	C8	119.4	120.8
C1	C4	C9	123.5	120.7
C1	C4	H41	118.2	120.4
N5	C2	C6	124.7	114.2
C2	N5	C10	122.2	120.7
C2	N5	C11	125.6	130.5
C2	C6	C12	120.3	122.2
C2	C6	H61	120.5	119.2
C7	C3	C8	121.1	119.4
C3	C7	C13	120.7	119.6
C3	C7	H71	119.7	120.0
C3	C8	C12	120.3	120.2
C3	C8	H81	120.1	119.8
C9	C4	H41	118.3	118.9
C4	C9	C13	119.0	119.7
C4	C9	O14	121.9	124.3
C10	N5	C11	111.9	108.7
N5	C10	C15	104.8	104.5
N5	C10	H101	114.0	110.3
N5	C10	H102	114.0	110.4
N5	C11	C17	103.0	110.5
N5	C11	O39	129.8	125.3
C12	C6	H61	119.2	118.6
C6	C12	C8	120.3	119.5
C6	C12	H121	119.8	120.3
C13	C7	H71	119.6	120.4
C7	C13	C9	119.5	121.4
C7	C13	H131	120.5	119.5
C12	C8	H81	119.6	120.0
C8	C12	H121	119.9	120.2
C13	C9	O14	118.7	116.0
C9	C13	H131	120.0	119.1
C9	O14	C18	114.1	131.2
C15	C10	H101	114.0	110.0
C15	C10	H102	114.0	110.8
C10	C15	C17	97.5	101.0
C10	C15	H151	116.9	111.0
C10	C15	H152	116.8	111.3
H101	C10	H102	96.5	110.8
C17	C11	O39	127.1	124.2
C11	C17	C15	107.2	104.8
C11	C17	N54	124.9	111.3
C11	C17	H171	119.8	111.8
O14	C18	C20	124.4	114.3
O14	C18	C21	116.0	127.7
C17	C15	H151	116.8	111.1
C17	C15	H152	116.8	111.3
C15	C17	N54	126.7	109.2
C15	C17	H171	113.7	110.7
H151	C15	H152	93.5	110.8
N54	C17	H171	50.8	109.1
C17	N54	C22	106.4	105.1
C17	N54	H541	113.3	101.6
C20	C18	C21	119.6	118.0
C18	C20	C23	119.3	121.0
C18	C20	C24	119.3	119.4
C18	C21	C25	121.4	120.6
C18	C21	H211	118.6	120.2
C23	C20	C24	121.3	119.6
C20	C23	C27	120.7	119.2
C20	C23	H231	119.4	120.2
C20	C24	N28	175.8	180.0
C25	C21	H211	119.9	119.2
C21	C25	C27	118.7	120.7
C21	C25	C29	122.7	119.7
C26	C22	N54	110.2	109.2
C26	C22	H221	111.9	109.4
C26	C22	H222	111.9	109.5
C22	C26	N30	124.8	124.7
C22	C26	C31	130.9	128.1
N54	C22	H221	111.9	109.0
N54	C22	H222	111.9	108.5
C22	N54	H541	113.4	101.3
H221	C22	H222	98.5	111.1
C27	C23	H231	120.0	120.6
C23	C27	C25	120.2	120.5
C23	C27	H271	120.0	119.4
C27	C25	C29	118.7	119.6
C25	C27	H271	119.8	120.0
C25	C29	N30	113.9	109.0
C25	C29	H291	110.6	109.5
C25	C29	H292	110.6	109.6
N30	C26	C31	104.3	107.1
C26	N30	C29	128.3	124.9
C26	N30	C32	107.4	107.4
C26	C31	N33	111.5	107.7
C26	C31	H311	125.0	125.8
N30	C29	H291	110.6	109.7
N30	C29	H292	110.6	109.6
C29	N30	C32	124.3	127.7
H291	C29	H292	99.7	109.4
N30	C32	N33	111.6	108.1
N30	C32	H321	125.4	125.9
N33	C31	H311	123.5	126.5
C31	N33	C32	105.2	109.6
N33	C32	H321	123.0	125.9

Torsion Angles for U49

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C3	C1	C2	C4	180.4	179.8
C2	C1	C3	C7	180.2	173.9
C2	C1	C3	C8	0.3	354.2
C2	C1	C4	C9	180.7	186.4
C2	C1	C4	H41	0.7	9.0
N5	C2	C1	C6	180.1	178.7
C1	C2	N5	C10	106.6	194.9
C1	C2	N5	C11	279.9	16.5
C1	C2	C6	C12	359.9	358.1
C1	C2	C6	H61	179.9	178.7
C2	C1	C3	C4	179.6	180.2
C3	C1	C2	N5	180.0	183.9
C3	C1	C2	C6	359.8	5.2
C3	C1	C4	C9	0.3	6.6
C3	C1	C4	H41	180.3	189.2
C7	C3	C1	C8	179.9	179.7
C1	C3	C7	C13	359.4	2.6
C1	C3	C7	H71	179.4	182.3
C1	C3	C8	C12	359.9	3.0
C1	C3	C8	H81	179.9	183.0
C2	C1	C4	C3	180.4	179.8
C4	C1	C2	N5	359.5	4.1
C4	C1	C2	C6	179.4	185.4
C4	C1	C3	C7	0.6	353.7
C4	C1	C3	C8	180.7	174.0
C9	C4	C1	H41	180.0	177.3
C1	C4	C9	C13	358.7	356.9
C1	C4	C9	O14	172.1	176.0
N5	C2	C1	C3	180.0	183.9
N5	C2	C1	C4	359.5	4.1
C1	C2	N5	C6	179.9	181.3
N5	C2	C6	C12	179.8	179.3
N5	C2	C6	H61	359.7	359.9
C10	N5	C2	C11	186.7	178.4
C2	N5	C10	C15	159.8	149.3
C2	N5	C10	H101	34.6	31.1
C2	N5	C10	H102	285.1	268.4
C2	N5	C11	C17	175.3	197.8
C2	N5	C11	O39	354.3	18.9
C6	C2	C1	C3	359.8	5.2
C6	C2	C1	C4	179.4	185.4
C1	C2	C6	N5	180.1	178.8
C6	C2	N5	C10	286.8	13.6
C6	C2	N5	C11	100.1	195.2
C12	C6	C2	H61	180.0	179.4
C2	C6	C12	C8	0.3	358.9
C2	C6	C12	H121	180.3	178.7
C7	C3	C1	C4	0.6	353.7
C1	C3	C7	C8	180.1	180.3
C7	C3	C8	C12	180.0	183.2
C7	C3	C8	H81	360.0	3.3
C13	C7	C3	H71	180.0	180.3
C3	C7	C13	C9	359.6	1.0
C3	C7	C13	H131	179.6	181.1
C8	C3	C1	C4	180.7	174.0
C1	C3	C8	C7	179.9	179.7
C8	C3	C7	C13	179.4	182.3
C8	C3	C7	H71	359.4	2.0
C6	C12	C8	C3	359.8	0.6
C12	C8	C3	H81	180.0	179.9
C3	C8	C12	H121	179.8	180.7
C1	C4	C9	H41	180.0	182.6
C7	C13	C9	C4	1.3	359.2
C13	C9	C4	O14	186.7	181.0
C4	C9	C13	H131	181.3	179.1
C4	C9	O14	C18	326.1	27.5
C1	C4	H41	C9	180.0	177.4
H41	C4	C9	C13	178.7	174.3
H41	C4	C9	O14	352.1	353.3
C10	N5	C2	C6	286.8	13.6
C2	N5	C10	C11	174.1	181.3
C10	N5	C11	C17	349.2	19.2
C10	N5	C11	O39	168.2	200.4
C15	C10	N5	H101	125.2	118.1
C15	C10	N5	H102	234.7	240.9
N5	C10	C15	C17	31.5	30.3
N5	C10	C15	H151	266.2	272.5
N5	C10	C15	H152	156.7	148.5
H101	C10	N5	H102	109.5	122.8
C11	N5	C2	C6	100.1	195.2
C2	N5	C11	C10	186.1	178.5
C11	N5	C10	C15	345.7	328.0
C11	N5	C10	H101	220.4	209.8
C11	N5	C10	H102	110.9	87.1
C17	C11	N5	O39	181.0	178.8
N5	C11	C17	C15	32.5	1.2
N5	C11	C17	N54	200.3	119.1
N5	C11	C17	H171	261.0	241.3
C2	C6	C12	H61	180.0	180.6
C3	C8	C12	C6	359.8	0.6
C6	C12	C8	H81	179.8	180.5
C8	C12	C6	H121	180.0	180.2
C2	C6	H61	C12	180.0	179.4
H61	C6	C12	C8	180.3	178.3
H61	C6	C12	H121	0.3	358.1
C13	C7	C3	C8	179.4	182.3
C3	C7	C13	H71	180.0	179.7
C4	C9	C13	C7	1.3	359.2
C7	C13	C9	O14	187.7	180.1
C9	C13	C7	H131	180.0	179.9
H71	C7	C3	C8	359.4	2.0
C3	C7	H71	C13	180.0	180.3
H71	C7	C13	C9	179.6	181.3
H71	C7	C13	H131	359.6	1.3
C3	C8	C12	H81	180.0	180.1
C8	C12	C6	H61	180.3	178.3
C6	C12	C8	H121	180.0	179.8
C3	C8	H81	C12	180.0	179.9
H81	C8	C12	H121	359.8	0.7
C13	C9	C4	H41	178.7	174.3
C4	C9	C13	O14	173.5	179.1
C9	C13	C7	H71	179.6	181.3
C7	C13	C9	H131	180.0	180.1
C13	C9	O14	C18	139.4	206.6
O14	C9	C4	H41	352.1	353.3
C4	C9	O14	C13	186.6	180.9
O14	C9	C13	H131	7.7	0.0
C9	O14	C18	C20	294.8	188.1
C9	O14	C18	C21	114.5	8.9
C15	C10	N5	C11	345.7	328.0
N5	C10	C15	H101	234.8	241.6
N5	C10	C15	H102	125.2	118.8
H101	C10	C15	H102	250.5	237.2
C11	C17	C15	C10	320.4	340.4
C17	C15	C10	H151	125.3	117.9
C17	C15	C10	H152	234.7	241.8
C10	C15	C17	N54	152.9	221.1
C10	C15	C17	H171	95.2	101.1
H151	C15	C10	H152	109.5	124.0
H101	C10	N5	C11	220.4	209.8
N5	C10	H101	C15	120.2	114.7
N5	C10	H101	H102	240.1	237.5
C15	C10	H101	H102	119.9	122.8
H101	C10	C15	C17	156.7	148.7
H101	C10	C15	H151	31.4	30.9
H101	C10	C15	H152	282.0	266.9
H102	C10	N5	C11	110.9	87.1
N5	C10	H102	C15	239.8	244.8
N5	C10	H102	H101	119.9	122.5
C15	C10	H102	H101	240.1	237.7
H102	C10	C15	C17	266.2	271.5
H102	C10	C15	H151	141.0	153.7
H102	C10	C15	H152	31.5	29.7
N5	C11	C17	O39	179.0	181.2
C10	C15	C17	C11	320.4	340.4
C11	C17	C15	H151	85.7	98.3
C11	C17	C15	H152	195.2	222.3
C15	C17	C11	N54	192.2	242.1
C15	C17	C11	H171	131.5	119.9
N54	C17	C11	H171	299.2	237.8
C11	C17	N54	C22	113.0	47.4
C11	C17	N54	H541	347.7	152.6
N5	C11	O39	C17	181.2	178.7
O39	C11	C17	C15	213.5	180.0
O39	C11	C17	N54	21.2	298.0
O39	C11	C17	H171	82.0	60.2
H121	C12	C6	H61	0.3	358.1
C6	C12	H121	C8	180.0	180.2
H121	C12	C8	H81	359.8	0.7
H131	C13	C7	H71	359.6	1.3
C7	C13	H131	C9	180.0	179.9
H131	C13	C9	O14	7.7	0.0
C20	C18	O14	C21	180.2	179.2
O14	C18	C20	C23	179.3	179.9
O14	C18	C20	C24	359.1	0.3
O14	C18	C21	C25	180.3	181.1
O14	C18	C21	H211	0.3	2.0
C17	C15	C10	H101	156.7	148.7
C17	C15	C10	H102	266.2	271.5
C10	C15	C17	H151	234.7	242.2
C10	C15	C17	H152	125.2	118.2
C15	C17	C11	O39	213.5	180.0
C11	C17	C15	N54	167.5	119.3
C11	C17	C15	H171	225.3	239.4
H151	C15	C17	H152	250.5	236.0
N54	C17	C15	H171	57.8	120.1
C15	C17	N54	C22	278.4	162.6
C15	C17	N54	H541	153.1	267.9
H151	C15	C10	H101	31.4	30.9
H151	C15	C10	H102	141.0	153.7
C10	C15	H151	C17	114.9	111.6
C10	C15	H151	H152	237.5	235.8
C17	C15	H151	H152	122.6	124.2
H151	C15	C17	N54	278.2	339.0
H151	C15	C17	H171	220.5	218.9
H152	C15	C10	H101	282.0	266.9
H152	C15	C10	H102	31.5	29.7
C10	C15	H152	C17	245.1	248.2
C10	C15	H152	H151	122.6	124.1
C17	C15	H152	H151	237.5	235.9
H152	C15	C17	N54	27.7	102.9
H152	C15	C17	H171	329.9	342.9
N54	C17	C11	O39	21.2	298.0
C11	C17	N54	C15	194.6	244.8
C11	C17	N54	H171	102.3	123.7
N54	C17	C15	H151	278.2	339.0
N54	C17	C15	H152	27.7	102.9
C15	C17	N54	H171	267.7	239.0
C26	C22	N54	C17	229.5	153.4
C17	N54	C22	H221	354.7	33.9
C17	N54	C22	H222	104.2	272.7
C22	N54	C17	H541	125.3	254.8
H171	C17	C11	O39	82.0	60.2
C11	C17	H171	C15	128.5	116.4
C11	C17	H171	N54	247.5	236.5
H171	C17	C15	H151	220.5	218.9
H171	C17	C15	H152	329.9	342.9
C15	C17	H171	N54	118.9	120.1
H171	C17	N54	C22	10.7	283.7
H171	C17	N54	H541	245.4	28.9
O14	C18	C20	C21	179.8	180.7
C20	C18	C21	C25	0.1	1.9
C20	C18	C21	H211	180.1	182.8
C23	C20	C18	C24	180.2	179.6
C18	C20	C23	C27	0.4	359.5
C18	C20	C23	H231	180.4	179.0
C18	C20	C24	N28	7.0	153.7
O14	C18	C21	C20	180.2	179.2
C21	C18	C20	C23	359.5	359.2
C21	C18	C20	C24	179.3	179.6
C25	C21	C18	H211	180.0	179.1
C18	C21	C25	C27	0.5	358.3
C18	C21	C25	C29	180.5	178.3
C23	C20	C18	C21	359.5	359.2
C18	C20	C23	C24	179.8	180.4
C23	C20	C24	N28	186.8	334.0
C27	C23	C20	H231	180.0	180.5
C20	C23	C27	C25	0.2	0.7
C20	C23	C27	H271	180.2	180.9
C24	C20	C18	C21	179.3	179.6
C18	C20	C24	C23	180.2	179.7
C24	C20	C23	C27	180.6	179.1
C24	C20	C23	H231	0.6	358.6
C18	C21	C25	H211	180.0	180.9
C23	C27	C25	C21	359.4	0.4
C27	C25	C21	C29	180.0	180.0
C21	C25	C27	H271	179.4	180.2
C21	C25	C29	N30	324.6	247.0
C21	C25	C29	H291	199.4	7.0
C21	C25	C29	H292	89.9	127.0
C18	C21	H211	C25	180.0	179.1
H211	C21	C25	C27	180.5	177.4
H211	C21	C25	C29	0.5	357.4
C17	N54	C22	C26	229.5	153.4
N54	C22	C26	H221	125.2	240.7
N54	C22	C26	H222	234.8	118.7
C26	C22	N54	H541	354.7	47.9
H221	C22	C26	H222	109.5	238.0
N30	C26	C22	C31	180.6	180.6
C22	C26	N30	C29	0.1	358.6
C22	C26	N30	C32	179.4	178.8
C22	C26	C31	N33	180.7	181.0
C22	C26	C31	H311	0.7	0.8
C22	N54	C17	H171	10.7	283.7
C17	N54	C22	H541	234.7	105.5
C26	C22	N54	H221	234.7	119.5
C26	C22	N54	H222	125.2	240.7
N54	C22	C26	N30	164.9	99.7
N54	C22	C26	C31	344.3	279.1
H221	C22	N54	H222	250.5	121.1
C26	C22	H221	N54	124.3	240.6
C26	C22	H221	H222	242.2	121.1
H221	C22	C26	N30	39.6	219.0
H221	C22	C26	C31	219.0	38.4
N54	C22	H221	H222	117.8	240.4
H221	C22	N54	H541	120.0	288.4
C26	C22	H222	N54	235.7	119.1
C26	C22	H222	H221	117.9	239.0
H222	C22	C26	N30	290.1	341.0
H222	C22	C26	C31	109.5	160.4
N54	C22	H222	H221	242.2	119.9
H222	C22	N54	H541	229.5	167.2
C27	C23	C20	C24	180.6	179.1
C20	C23	C27	H231	180.0	179.5
C21	C25	C27	C23	359.4	0.4
C23	C27	C25	C29	179.4	180.3
C25	C27	C23	H271	180.0	179.9
H231	C23	C20	C24	0.6	358.6
C20	C23	H231	C27	180.0	180.5
H231	C23	C27	C25	180.2	181.3
H231	C23	C27	H271	0.2	1.4
C27	C25	C21	H211	180.5	177.4
C21	C25	C27	C29	180.0	180.0
C25	C27	C23	H231	180.2	181.3
C23	C27	C25	H271	180.0	180.1
C27	C25	C29	N30	144.7	67.0
C27	C25	C29	H291	19.4	187.1
C27	C25	C29	H292	269.9	307.0
C29	C25	C21	H211	0.5	357.4
C21	C25	C29	C27	180.0	180.0
C29	C25	C27	H271	359.4	0.2
C26	N30	C29	C25	291.5	74.1
N30	C29	C25	H291	125.3	239.9
N30	C29	C25	H292	234.7	120.0
C25	C29	N30	C32	112.3	253.9
H291	C29	C25	H292	109.5	240.0
N30	C26	C22	N54	164.9	99.7
N30	C26	C22	H221	39.6	219.0
N30	C26	C22	H222	290.1	341.0
C22	C26	N30	C31	179.5	179.5
C25	C29	N30	C26	291.5	74.1
N30	C26	C31	N33	0.2	0.5
N30	C26	C31	H311	180.2	180.3
C26	N30	C29	H291	56.7	314.2
C26	N30	C29	H292	166.2	194.0
C29	N30	C26	C32	180.7	179.9
C26	N30	C32	N33	0.1	0.7
C26	N30	C32	H321	180.1	180.3
C31	C26	C22	N54	344.3	279.1
C31	C26	C22	H221	219.0	38.4
C31	C26	C22	H222	109.5	160.4
C22	C26	C31	N30	180.5	180.5
C31	C26	N30	C29	180.6	179.1
C31	C26	N30	C32	359.8	359.3
N33	C31	C26	H311	180.0	180.2
C26	C31	N33	C32	359.9	359.9
H271	C27	C23	H231	0.2	1.4
C23	C27	H271	C25	180.0	179.9
H271	C27	C25	C29	359.4	0.2
C25	C29	N30	H291	234.7	119.9
C25	C29	N30	H292	125.3	240.0
C29	N30	C26	C31	180.6	179.1
C26	N30	C29	C32	179.2	180.2
H291	C29	N30	H292	250.5	120.1
C29	N30	C32	N33	179.4	180.8
C29	N30	C32	H321	359.4	0.4
C25	C29	H291	N30	127.1	240.4
C25	C29	H291	H292	243.6	120.1
N30	C29	H291	H292	116.5	239.7
H291	C29	N30	C32	237.6	134.0
C25	C29	H292	N30	232.9	119.6
C25	C29	H292	H291	116.4	240.0
N30	C29	H292	H291	243.6	120.4
H292	C29	N30	C32	347.0	13.9
C32	N30	C26	C31	359.8	359.3
C26	N30	C32	C29	180.7	179.9
C32	N30	C29	H291	237.6	134.0
C32	N30	C29	H292	347.0	13.9
C31	N33	C32	N30	0.0	359.6
N33	C32	N30	H321	180.0	180.4
C26	C31	N33	H311	180.0	179.8
N30	C32	N33	C31	0.0	359.6
C31	N33	C32	H321	180.0	180.0
C26	C31	H311	N33	180.0	180.2
H311	C31	N33	C32	179.9	180.1
N30	C32	N33	H321	180.0	179.6
C32	N33	C31	H311	179.9	180.1
N30	C32	H321	N33	180.0	180.4
H541	N54	C17	H171	245.4	28.9
C17	N54	H541	C22	121.4	251.8
H541	N54	C22	H221	120.0	288.4
H541	N54	C22	H222	229.5	167.2