PDB Chemical Component U1S

Ideal Model

Chemical Description

Name 1-{5-deoxy-5-[4-(ethoxycarbonyl)piperidin-1-yl]-alpha-L-arabinofuranosyl}pyrimidine-2,4(1H,3H)-dione
Formula C17 H25 N3 O7
Formal charge 0
Molecular weight 383.396 g/mol
Component type NON-POLYMER

Chemical features

Atom count 52
Chiral atom count 4
Chiral atoms C4' C3' C2' C1'
Bond count 54
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) 1-{5-deoxy-5-[4-(ethoxycarbonyl)piperidin-1-yl]-alpha-L-arabinofuranosyl}pyrimidine-2,4(1H,3H)-dione
Systematic name (OpenEye OEToolkits) ethyl 1-[[(2S,3R,4R,5R)-5-(2,4-dioxopyrimidin-1-yl)-3,4-dihydroxy-oxolan-2-yl]methyl]piperidine-4-carboxylate

Chemical Descriptors

Stereo SMILES (CACTVS) CCOC(=O)[C@H]1CCN(CC1)C[C@@H]2O[C@H]([C@H](O)[C@H]2O)N3C=CC(=O)NC3=O
SMILES (CACTVS) CCOC(=O)[CH]1CCN(CC1)C[CH]2O[CH]([CH](O)[CH]2O)N3C=CC(=O)NC3=O
Stereo SMILES (OpenEye) CCOC(=O)C1CCN(CC1)C[C@H]2[C@@H]([C@H]([C@@H](O2)N3C=CC(=O)NC3=O)O)O
InChI descriptor InChI=1S/C17H25N3O7/c1-2-26-16(24)10-3-6-19(7-4-10)9-11-13(22)14(23)15(27-11)20-8-5-12(21)18-17(20)25/h5,8,10-11,13-15,22-23H,2-4,6-7,9H2,1H3,(H,18,21,25)/t11-,13-,14+,15+/m0/s1
InChIKey descriptor JCIDLMJUELAXRU-SPWCGHHHSA-N

Status Information

Last modified 2011-06-04
Created 2008-06-10
Release status REL
Model PDB code 3D6O
Processing site RCSB