PDB Chemical Component TYZ

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for TYZ

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O1 C7 1.261 1.235
O2 C7   1.361
O2 H1   0.982
C7 C3 1.460 1.455
C3 C4 1.367 1.394
C3 C2 1.455 1.395
C4 C5 1.396 1.395
C4 H4 1.103 1.088
C5 C6 1.416 1.395
C5 H5 1.103 1.087
C6 C1 1.379 1.395
C6 N 1.373 1.395
C1 C2 1.388 1.395
C1 HA 1.103 1.087
C2 H2 1.103 1.087
C8 N 1.381 1.401
C8 O4 1.250 1.227
C8 C9 1.519 1.508
N HN 1.019 1.026
C9 H9C1 1.115 1.094
C9 H9C2 1.115 1.094
C9 H9C3 1.115 1.093

Bond Angles for TYZ

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O1 C7 O2   122.1
O1 C7 C3 121.7 125.4
C7 O2 H1   113.1
O2 C7 C3   112.5
C7 C3 C4 118.4 120.0
C7 C3 C2 120.7 120.0
C4 C3 C2 120.7 120.0
C3 C4 C5 115.3 120.0
C3 C4 H4 122.3 120.7
C3 C2 C1 122.6 120.0
C3 C2 H2 118.7 120.7
C5 C4 H4 122.3 119.3
C4 C5 C6 124.7 120.0
C4 C5 H5 117.7 119.4
C6 C5 H5 117.6 120.7
C5 C6 C1 120.0 120.0
C5 C6 N 122.3 120.0
C1 C6 N 117.6 120.1
C6 C1 C2 116.6 120.0
C6 C1 HA 121.7 120.6
C6 N C8 123.7 128.1
C6 N HN 117.9 116.4
C2 C1 HA 121.7 119.3
C1 C2 H2 118.7 119.4
N C8 O4 123.1 127.5
N C8 C9 119.7 111.8
C8 N HN 118.5 115.5
O4 C8 C9 117.2 120.8
C8 C9 H9C1 119.6 109.8
C8 C9 H9C2 108.6 109.8
C8 C9 H9C3 108.5 110.0
H9C1 C9 H9C2 108.5 108.9
H9C1 C9 H9C3 108.6 109.6
H9C2 C9 H9C3 101.5 108.8

Torsion Angles for TYZ

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O1 C7 O2 H1   0.0
O2 C7 O1 C3   180.1
O1 C7 C3 C4 162.9 360.0
O1 C7 C3 C2 348.5 180.1
O1 C7 O2 C3   180.0
O2 C7 C3 C4   179.9
O2 C7 C3 C2   0.0
H1 O2 C7 C3   180.1
O1 C7 C3 O2   180.1
C3 C7 O2 H1   180.1
C4 C3 C7 C2 174.5 179.9
C7 C3 C4 C5 182.6 180.1
C7 C3 C4 H4 2.6 0.1
C7 C3 C2 C1 178.1 179.9
C7 C3 C2 H2 358.1 360.0
C7 C3 C4 C2 185.5 180.1
C4 C3 C2 C1 3.8 360.0
C4 C3 C2 H2 183.8 180.1
C5 C4 C3 H4 180.0 180.0
C3 C4 C5 C6 2.0 360.0
C3 C4 C5 H5 182.0 180.0
C7 C3 C2 C4 174.3 179.9
C2 C3 C4 C5 357.1 0.0
C2 C3 C4 H4 177.1 180.0
C6 C1 C2 C3 356.8 0.0
C3 C2 C1 HA 176.8 180.0
C1 C2 C3 H2 180.0 179.9
C5 C4 C3 C2 357.1 0.0
C3 C4 C5 H4 180.0 180.0
C6 C5 C4 H5 180.0 180.0
C4 C5 C6 C1 358.4 0.0
C4 C5 C6 N 182.4 180.0
H4 C4 C3 C2 177.1 180.0
C3 C4 H4 C5 180.0 180.0
H4 C4 C5 C6 182.0 180.0
H4 C4 C5 H5 2.0 0.1
C6 C5 C4 H4 182.0 180.0
C4 C5 C6 H5 180.0 180.0
C1 C6 C5 N 176.0 180.1
C5 C6 C1 C2 2.1 360.0
C5 C6 C1 HA 182.1 180.0
C5 C6 N C8 6.2 180.0
C5 C6 N HN 186.3 360.0
H5 C5 C4 H4 2.0 0.1
C4 C5 H5 C6 180.0 180.0
H5 C5 C6 C1 178.4 180.0
H5 C5 C6 N 2.4 359.9
C3 C2 C1 C6 356.8 0.0
C1 C6 C5 H5 178.4 180.0
C5 C6 C1 N 183.8 179.9
C1 C6 N C8 190.2 359.9
C1 C6 N HN 10.2 179.9
C2 C1 C6 HA 180.0 180.0
C6 C1 C2 H2 176.8 179.9
N C6 C5 H5 2.4 359.9
C5 C6 N C1 176.1 180.1
N C6 C1 C2 178.3 180.0
N C6 C1 HA 358.3 0.0
C6 N C8 O4 187.7 0.2
C6 N C8 C9 7.2 180.0
C8 N C6 HN 179.9 180.0
C3 C2 C1 H2 180.0 180.1
C2 C1 C6 N 178.3 180.0
C6 C1 C2 HA 180.0 180.0
HA C1 C6 N 358.3 0.0
C6 C1 HA C2 180.0 180.0
HA C1 C2 H2 356.8 359.9
C3 C2 H2 C1 180.0 179.9
H2 C2 C1 HA 356.8 359.9
C6 N C8 HN 180.1 180.0
O4 C8 N C9 180.5 180.2
N C8 C9 H9C1 180.0 297.8
N C8 C9 H9C2 54.7 178.1
N C8 C9 H9C3 305.3 58.4
N C8 O4 C9 179.5 179.8
O4 C8 N HN 7.7 180.3
O4 C8 C9 H9C1 359.5 117.6
O4 C8 C9 H9C2 234.3 357.9
O4 C8 C9 H9C3 124.8 238.2
N C8 C9 O4 180.5 180.2
C9 C8 N HN 187.2 0.1
H9C1 C9 C8 H9C2 125.2 119.7
H9C1 C9 C8 H9C3 234.7 239.4
H9C2 C9 C8 H9C3 109.5 119.7
C6 N HN C8 180.0 180.0
HN N C8 O4 7.7 180.3
HN N C8 C9 187.2 0.1
C8 C9 H9C1 H9C2 234.8 239.8
C8 C9 H9C1 H9C3 125.3 120.9
H9C2 C9 H9C1 H9C3 250.5 241.1
C8 C9 H9C2 H9C1 131.5 120.2
C8 C9 H9C2 H9C3 245.8 239.6
H9C1 C9 H9C2 H9C3 114.3 119.4
C8 C9 H9C3 H9C1 228.5 239.2
C8 C9 H9C3 H9C2 114.2 120.3
H9C1 C9 H9C3 H9C2 245.8 241.0