PDB Chemical Component TYR
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for TYR
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.464 |
1.469 |
| N |
H |
0.859 |
1.009 |
| N |
H2 |
1.020 |
1.009 |
| CA |
C |
1.524 |
1.507 |
| CA |
CB |
1.532 |
1.529 |
| CA |
HA |
0.980 |
1.091 |
| C |
O |
1.239 |
1.207 |
| C |
OXT |
1.343 |
1.342 |
| CB |
CG |
1.509 |
1.506 |
| CB |
HB2 |
0.970 |
1.089 |
| CB |
HB3 |
0.970 |
1.091 |
| CG |
CD1 |
1.395 |
1.382 |
| CG |
CD2 |
1.400 |
1.383 |
| CD1 |
CE1 |
1.378 |
1.381 |
| CD1 |
HD1 |
0.930 |
1.079 |
| CD2 |
CE2 |
1.384 |
1.381 |
| CD2 |
HD2 |
0.930 |
1.080 |
| CE1 |
CZ |
1.398 |
1.387 |
| CE1 |
HE1 |
0.929 |
1.080 |
| CE2 |
CZ |
1.386 |
1.388 |
| CE2 |
HE2 |
0.930 |
1.080 |
| CZ |
OH |
1.375 |
1.358 |
| OH |
HH |
0.819 |
0.966 |
| OXT |
HXT |
0.950 |
0.968 |
Bond Angles for TYR
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
H |
120.0 |
106.7 |
| CA |
N |
H2 |
110.7 |
106.7 |
| N |
CA |
C |
113.6 |
109.5 |
| N |
CA |
CB |
110.5 |
109.5 |
| N |
CA |
HA |
106.6 |
109.4 |
| H |
N |
H2 |
50.1 |
106.7 |
| C |
CA |
CB |
112.6 |
109.5 |
| C |
CA |
HA |
106.6 |
109.5 |
| CA |
C |
O |
121.6 |
120.0 |
| CA |
C |
OXT |
117.6 |
120.0 |
| CB |
CA |
HA |
106.5 |
109.5 |
| CA |
CB |
CG |
116.1 |
109.5 |
| CA |
CB |
HB2 |
108.2 |
109.5 |
| CA |
CB |
HB3 |
108.2 |
109.5 |
| O |
C |
OXT |
120.8 |
120.0 |
| C |
OXT |
HXT |
117.6 |
119.9 |
| CG |
CB |
HB2 |
108.3 |
109.5 |
| CG |
CB |
HB3 |
108.3 |
109.5 |
| CB |
CG |
CD1 |
121.4 |
119.9 |
| CB |
CG |
CD2 |
122.6 |
119.9 |
| HB2 |
CB |
HB3 |
107.3 |
109.4 |
| CD1 |
CG |
CD2 |
115.9 |
120.1 |
| CG |
CD1 |
CE1 |
123.2 |
120.1 |
| CG |
CD1 |
HD1 |
118.4 |
119.9 |
| CG |
CD2 |
CE2 |
122.1 |
120.0 |
| CG |
CD2 |
HD2 |
119.0 |
120.0 |
| CE1 |
CD1 |
HD1 |
118.4 |
120.0 |
| CD1 |
CE1 |
CZ |
119.3 |
120.0 |
| CD1 |
CE1 |
HE1 |
120.4 |
120.1 |
| CE2 |
CD2 |
HD2 |
118.9 |
120.0 |
| CD2 |
CE2 |
CZ |
120.3 |
120.0 |
| CD2 |
CE2 |
HE2 |
119.8 |
120.0 |
| CZ |
CE1 |
HE1 |
120.3 |
120.0 |
| CE1 |
CZ |
CE2 |
119.1 |
119.8 |
| CE1 |
CZ |
OH |
120.4 |
120.1 |
| CZ |
CE2 |
HE2 |
119.9 |
120.0 |
| CE2 |
CZ |
OH |
120.5 |
120.0 |
| CZ |
OH |
HH |
109.5 |
106.9 |
Torsion Angles for TYR
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H |
N |
CA |
H2 |
55.0 |
246.3 |
| C |
CA |
N |
CB |
127.7 |
120.0 |
| C |
CA |
N |
HA |
242.9 |
240.0 |
| N |
CA |
C |
O |
135.4 |
330.0 |
| N |
CA |
C |
OXT |
316.1 |
150.0 |
| CB |
CA |
N |
HA |
115.3 |
120.0 |
| N |
CA |
CB |
CG |
276.4 |
300.0 |
| N |
CA |
CB |
HB2 |
38.3 |
60.1 |
| N |
CA |
CB |
HB3 |
154.3 |
180.0 |
| CA |
N |
H |
H2 |
267.1 |
113.7 |
| H |
N |
CA |
C |
109.7 |
60.0 |
| H |
N |
CA |
CB |
342.1 |
300.0 |
| H |
N |
CA |
HA |
226.8 |
180.0 |
| CA |
N |
H2 |
H |
112.3 |
246.3 |
| H2 |
N |
CA |
C |
54.7 |
173.8 |
| H2 |
N |
CA |
CB |
287.0 |
53.7 |
| H2 |
N |
CA |
HA |
171.8 |
293.7 |
| C |
CA |
N |
H |
109.7 |
60.0 |
| C |
CA |
N |
H2 |
54.7 |
173.8 |
| N |
CA |
C |
CB |
233.4 |
240.0 |
| N |
CA |
C |
HA |
117.0 |
120.0 |
| CB |
CA |
C |
HA |
243.6 |
240.0 |
| C |
CA |
CB |
CG |
148.2 |
180.0 |
| C |
CA |
CB |
HB2 |
270.1 |
300.1 |
| C |
CA |
CB |
HB3 |
26.2 |
60.0 |
| O |
C |
CA |
OXT |
179.4 |
180.1 |
| CA |
C |
OXT |
HXT |
179.9 |
180.1 |
| CB |
CA |
N |
H |
342.1 |
300.0 |
| CB |
CA |
N |
H2 |
287.0 |
53.7 |
| N |
CA |
CB |
C |
128.2 |
120.0 |
| N |
CA |
CB |
HA |
244.7 |
240.1 |
| C |
CA |
CB |
HA |
116.5 |
120.0 |
| CB |
CA |
C |
O |
262.0 |
90.0 |
| CB |
CA |
C |
OXT |
82.6 |
270.0 |
| CG |
CB |
CA |
HB2 |
238.0 |
239.9 |
| CG |
CB |
CA |
HB3 |
122.0 |
120.0 |
| CA |
CB |
CG |
CD1 |
308.0 |
90.0 |
| CA |
CB |
CG |
CD2 |
131.2 |
269.7 |
| HB2 |
CB |
CA |
HB3 |
244.0 |
240.1 |
| HA |
CA |
N |
H |
226.8 |
180.0 |
| HA |
CA |
N |
H2 |
171.8 |
293.7 |
| N |
CA |
HA |
C |
238.4 |
240.0 |
| N |
CA |
HA |
CB |
118.0 |
120.0 |
| C |
CA |
HA |
CB |
239.6 |
240.0 |
| HA |
CA |
C |
O |
18.4 |
210.1 |
| HA |
CA |
C |
OXT |
199.0 |
30.0 |
| HA |
CA |
CB |
CG |
31.7 |
60.0 |
| HA |
CA |
CB |
HB2 |
153.7 |
180.1 |
| HA |
CA |
CB |
HB3 |
269.7 |
300.0 |
| O |
C |
CA |
CB |
262.0 |
90.0 |
| O |
C |
CA |
HA |
18.4 |
210.1 |
| CA |
C |
O |
OXT |
180.6 |
179.9 |
| O |
C |
OXT |
HXT |
0.5 |
0.0 |
| OXT |
C |
CA |
CB |
82.6 |
270.0 |
| OXT |
C |
CA |
HA |
199.0 |
30.0 |
| CA |
C |
OXT |
O |
179.4 |
180.1 |
| CG |
CB |
CA |
HA |
31.7 |
60.0 |
| CA |
CB |
CG |
HB2 |
121.9 |
120.1 |
| CA |
CB |
CG |
HB3 |
238.1 |
240.0 |
| HB2 |
CB |
CG |
HB3 |
116.1 |
119.9 |
| CD1 |
CG |
CB |
CD2 |
176.7 |
180.3 |
| CB |
CG |
CD1 |
CE1 |
181.4 |
180.0 |
| CB |
CG |
CD1 |
HD1 |
1.5 |
0.0 |
| CB |
CG |
CD2 |
CE2 |
176.0 |
179.8 |
| CB |
CG |
CD2 |
HD2 |
356.1 |
0.2 |
| HB2 |
CB |
CA |
HA |
153.7 |
180.1 |
| CA |
CB |
HB2 |
CG |
233.3 |
239.9 |
| CA |
CB |
HB2 |
HB3 |
116.6 |
120.0 |
| CG |
CB |
HB2 |
HB3 |
243.2 |
240.0 |
| HB2 |
CB |
CG |
CD1 |
186.0 |
329.9 |
| HB2 |
CB |
CG |
CD2 |
9.3 |
149.6 |
| HB3 |
CB |
CA |
HA |
269.7 |
300.0 |
| CA |
CB |
HB3 |
CG |
126.7 |
120.0 |
| CA |
CB |
HB3 |
HB2 |
243.4 |
240.0 |
| CG |
CB |
HB3 |
HB2 |
116.8 |
120.0 |
| HB3 |
CB |
CG |
CD1 |
69.9 |
210.0 |
| HB3 |
CB |
CG |
CD2 |
253.2 |
29.7 |
| CD1 |
CG |
CB |
HB2 |
186.0 |
329.9 |
| CD1 |
CG |
CB |
HB3 |
69.9 |
210.0 |
| CB |
CG |
CD1 |
CD2 |
183.1 |
179.7 |
| CD1 |
CG |
CD2 |
CE2 |
359.1 |
359.5 |
| CD1 |
CG |
CD2 |
HD2 |
179.2 |
179.9 |
| CE1 |
CD1 |
CG |
HD1 |
179.9 |
180.0 |
| CG |
CD1 |
CE1 |
CZ |
2.9 |
359.9 |
| CG |
CD1 |
CE1 |
HE1 |
182.9 |
180.0 |
| CD2 |
CG |
CB |
HB2 |
9.3 |
149.6 |
| CD2 |
CG |
CB |
HB3 |
253.2 |
29.7 |
| CB |
CG |
CD2 |
CD1 |
176.9 |
180.3 |
| CD2 |
CG |
CD1 |
CE1 |
358.3 |
0.3 |
| CD2 |
CG |
CD1 |
HD1 |
178.4 |
180.3 |
| CE2 |
CD2 |
CG |
HD2 |
179.9 |
179.5 |
| CG |
CD2 |
CE2 |
CZ |
2.2 |
0.5 |
| CG |
CD2 |
CE2 |
HE2 |
182.1 |
180.3 |
| CE1 |
CD1 |
CG |
CD2 |
358.3 |
0.3 |
| CG |
CD1 |
CE1 |
HD1 |
180.1 |
180.0 |
| CZ |
CE1 |
CD1 |
HE1 |
180.1 |
179.9 |
| CD1 |
CE1 |
CZ |
CE2 |
358.4 |
0.1 |
| CD1 |
CE1 |
CZ |
OH |
178.7 |
180.0 |
| HD1 |
CD1 |
CG |
CD2 |
178.4 |
180.3 |
| CG |
CD1 |
HD1 |
CE1 |
179.9 |
180.0 |
| HD1 |
CD1 |
CE1 |
CZ |
182.8 |
179.9 |
| HD1 |
CD1 |
CE1 |
HE1 |
2.8 |
359.9 |
| CG |
CD2 |
CE2 |
HD2 |
180.1 |
180.5 |
| CE1 |
CZ |
CE2 |
CD2 |
359.1 |
359.7 |
| CZ |
CE2 |
CD2 |
HE2 |
180.1 |
180.2 |
| CD2 |
CE2 |
CZ |
OH |
178.8 |
179.8 |
| CG |
CD2 |
HD2 |
CE2 |
179.9 |
179.5 |
| HD2 |
CD2 |
CE2 |
CZ |
182.1 |
180.0 |
| HD2 |
CD2 |
CE2 |
HE2 |
2.0 |
359.9 |
| CZ |
CE1 |
CD1 |
HD1 |
182.8 |
179.9 |
| CD1 |
CE1 |
CZ |
HE1 |
179.9 |
180.1 |
| CD2 |
CE2 |
CZ |
CE1 |
359.1 |
359.7 |
| CE1 |
CZ |
CE2 |
HE2 |
179.2 |
179.9 |
| CE2 |
CZ |
CE1 |
OH |
179.7 |
180.0 |
| CE1 |
CZ |
OH |
HH |
0.2 |
90.0 |
| HE1 |
CE1 |
CD1 |
HD1 |
2.8 |
359.9 |
| CD1 |
CE1 |
HE1 |
CZ |
180.1 |
179.9 |
| HE1 |
CE1 |
CZ |
CE2 |
178.5 |
180.0 |
| HE1 |
CE1 |
CZ |
OH |
358.8 |
360.0 |
| CZ |
CE2 |
CD2 |
HD2 |
182.1 |
180.0 |
| CD2 |
CE2 |
CZ |
HE2 |
179.9 |
179.8 |
| CE2 |
CZ |
CE1 |
HE1 |
178.5 |
180.0 |
| CE1 |
CZ |
CE2 |
OH |
180.3 |
180.0 |
| CE2 |
CZ |
OH |
HH |
180.5 |
270.0 |
| HE2 |
CE2 |
CD2 |
HD2 |
2.0 |
359.9 |
| CD2 |
CE2 |
HE2 |
CZ |
180.1 |
180.2 |
| HE2 |
CE2 |
CZ |
OH |
358.9 |
359.9 |
| OH |
CZ |
CE1 |
HE1 |
358.8 |
360.0 |
| CE1 |
CZ |
OH |
CE2 |
179.7 |
180.0 |
| OH |
CZ |
CE2 |
HE2 |
358.9 |
359.9 |