PDB Chemical Component TY4
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for TY4
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C6 |
C1 |
1.439 |
1.387 |
| C2 |
C1 |
1.478 |
1.387 |
| C1 |
O20 |
1.344 |
1.359 |
| C3 |
C2 |
1.389 |
1.381 |
| C2 |
C18 |
1.536 |
1.507 |
| C4 |
C3 |
1.382 |
1.384 |
| C3 |
H3 |
1.080 |
1.080 |
| BR19 |
C4 |
1.858 |
1.890 |
| C4 |
C5 |
1.397 |
1.383 |
| C5 |
C6 |
1.368 |
1.381 |
| C5 |
H5 |
1.080 |
1.081 |
| C6 |
C7 |
1.502 |
1.507 |
| N8 |
C7 |
1.450 |
1.465 |
| C7 |
H7 |
1.100 |
1.091 |
| C7 |
H7A |
1.100 |
1.090 |
| C9 |
N8 |
1.316 |
1.348 |
| N8 |
HN8 |
1.000 |
0.970 |
| C11 |
C9 |
1.524 |
1.477 |
| C9 |
O10 |
1.231 |
1.216 |
| C16 |
C11 |
1.483 |
1.398 |
| C11 |
C12 |
1.373 |
1.396 |
| C13 |
C12 |
1.400 |
1.379 |
| C12 |
H12 |
1.080 |
1.079 |
| C14 |
C13 |
1.383 |
1.385 |
| C13 |
H13 |
1.079 |
1.080 |
| C15 |
C14 |
1.393 |
1.383 |
| C14 |
H14 |
1.080 |
1.080 |
| C15 |
C16 |
1.422 |
1.381 |
| C15 |
H15 |
1.080 |
1.080 |
| CL17 |
C16 |
1.792 |
1.736 |
| C18 |
H18 |
1.100 |
1.090 |
| C18 |
H18A |
1.100 |
1.090 |
| C18 |
H18B |
1.100 |
1.090 |
| O20 |
C21 |
1.429 |
1.347 |
| C21 |
O22 |
1.216 |
1.215 |
| C21 |
C23 |
1.457 |
1.476 |
| C24 |
C23 |
1.390 |
1.396 |
| C23 |
C28 |
1.458 |
1.398 |
| C24 |
C25 |
1.392 |
1.378 |
| C24 |
H24 |
1.080 |
1.080 |
| C25 |
C26 |
1.389 |
1.385 |
| C25 |
H25 |
1.080 |
1.080 |
| C26 |
C27 |
1.364 |
1.385 |
| C26 |
CL30 |
1.765 |
1.736 |
| C28 |
C27 |
1.360 |
1.380 |
| C27 |
H27 |
1.080 |
1.080 |
| C28 |
CL29 |
1.751 |
1.736 |
Bond Angles for TY4
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C6 |
C1 |
O20 |
113.9 |
120.0 |
| C2 |
C1 |
O20 |
122.3 |
120.0 |
| C1 |
O20 |
C21 |
124.4 |
117.0 |
| C3 |
C2 |
C18 |
123.2 |
120.0 |
| C2 |
C18 |
H18 |
109.5 |
109.5 |
| C2 |
C18 |
H18A |
109.4 |
109.4 |
| C2 |
C18 |
H18B |
109.5 |
109.5 |
| C4 |
C3 |
H3 |
121.4 |
120.0 |
| C4 |
C5 |
C6 |
118.1 |
120.1 |
| C4 |
C5 |
H5 |
121.0 |
119.9 |
| C6 |
C5 |
H5 |
120.9 |
120.0 |
| C5 |
C6 |
C7 |
124.2 |
120.0 |
| C6 |
C7 |
H7 |
108.5 |
109.5 |
| C6 |
C7 |
H7A |
108.5 |
109.5 |
| N8 |
C7 |
H7 |
108.5 |
109.4 |
| N8 |
C7 |
H7A |
108.5 |
109.5 |
| H7 |
C7 |
H7A |
110.4 |
109.5 |
| C9 |
N8 |
HN8 |
119.1 |
120.0 |
| C11 |
C12 |
H12 |
118.5 |
120.1 |
| C13 |
C12 |
H12 |
118.5 |
120.0 |
| C14 |
C13 |
H13 |
118.7 |
119.9 |
| C15 |
C14 |
H14 |
120.9 |
119.9 |
| C16 |
C15 |
H15 |
120.1 |
120.0 |
| H18 |
C18 |
H18A |
109.5 |
109.5 |
| H18 |
C18 |
H18B |
109.5 |
109.5 |
| H18A |
C18 |
H18B |
109.5 |
109.5 |
| O20 |
C21 |
O22 |
122.8 |
120.0 |
| O20 |
C21 |
C23 |
113.8 |
120.0 |
| O22 |
C21 |
C23 |
123.4 |
120.0 |
| C21 |
C23 |
C28 |
117.5 |
120.2 |
| C24 |
C23 |
C28 |
120.9 |
119.7 |
| C23 |
C28 |
C27 |
121.1 |
119.8 |
| C23 |
C28 |
CL29 |
121.3 |
120.1 |
| C25 |
C24 |
H24 |
121.7 |
120.0 |
| C24 |
C25 |
C26 |
120.6 |
120.2 |
| C24 |
C25 |
H25 |
119.7 |
119.9 |
| C26 |
C25 |
H25 |
119.7 |
119.9 |
| C25 |
C26 |
C27 |
124.6 |
120.3 |
| C25 |
C26 |
CL30 |
124.0 |
119.8 |
| C27 |
C26 |
CL30 |
111.3 |
119.9 |
| C26 |
C27 |
H27 |
121.8 |
119.9 |
| C28 |
C27 |
H27 |
121.8 |
120.0 |
Torsion Angles for TY4
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
C1 |
C6 |
O20 |
181.4 |
179.7 |
| C6 |
C1 |
O20 |
C21 |
115.6 |
269.7 |
| C6 |
C1 |
C2 |
O20 |
178.5 |
180.3 |
| C2 |
C1 |
O20 |
C21 |
294.3 |
90.0 |
| C1 |
O20 |
C21 |
O22 |
358.6 |
0.0 |
| C1 |
O20 |
C21 |
C23 |
179.0 |
180.0 |
| C3 |
C2 |
C1 |
O20 |
179.4 |
179.9 |
| C3 |
C2 |
C18 |
H18 |
270.3 |
270.0 |
| C3 |
C2 |
C18 |
H18A |
30.3 |
30.0 |
| C3 |
C2 |
C18 |
H18B |
150.3 |
150.0 |
| C18 |
C2 |
C1 |
O20 |
359.9 |
360.0 |
| H18 |
C18 |
C2 |
H18A |
240.0 |
240.0 |
| H18 |
C18 |
C2 |
H18B |
120.0 |
120.0 |
| H18A |
C18 |
C2 |
H18B |
240.0 |
240.0 |
| C4 |
C3 |
C2 |
C18 |
182.9 |
180.1 |
| H3 |
C3 |
C2 |
C18 |
2.9 |
359.9 |
| BR19 |
C4 |
C3 |
H3 |
358.7 |
0.1 |
| BR19 |
C4 |
C5 |
H5 |
0.7 |
359.9 |
| C5 |
C4 |
C3 |
H3 |
175.3 |
180.0 |
| C6 |
C5 |
C4 |
H5 |
180.0 |
179.8 |
| C4 |
C5 |
C6 |
C7 |
180.3 |
180.0 |
| C5 |
C6 |
C1 |
O20 |
179.9 |
179.8 |
| C4 |
C5 |
C6 |
H5 |
180.0 |
180.2 |
| C5 |
C6 |
C7 |
H7 |
82.8 |
20.0 |
| C5 |
C6 |
C7 |
H7A |
202.8 |
140.0 |
| C4 |
C5 |
H5 |
C6 |
180.0 |
179.8 |
| H5 |
C5 |
C6 |
C7 |
0.3 |
359.8 |
| C7 |
C6 |
C1 |
O20 |
357.8 |
0.3 |
| C7 |
C6 |
C5 |
H5 |
0.3 |
359.8 |
| N8 |
C7 |
C6 |
H7 |
240.0 |
240.0 |
| N8 |
C7 |
C6 |
H7A |
120.0 |
120.1 |
| H7 |
C7 |
C6 |
H7A |
240.0 |
240.0 |
| C6 |
C7 |
N8 |
H7 |
120.0 |
120.0 |
| C6 |
C7 |
N8 |
H7A |
240.0 |
240.0 |
| H7 |
C7 |
N8 |
H7A |
120.0 |
120.0 |
| C6 |
C7 |
H7 |
H7A |
118.8 |
120.0 |
| N8 |
C7 |
H7 |
H7A |
241.2 |
240.0 |
| C6 |
C7 |
H7A |
H7 |
241.2 |
240.0 |
| N8 |
C7 |
H7A |
H7 |
118.8 |
120.0 |
| C9 |
N8 |
C7 |
H7 |
339.1 |
60.0 |
| C9 |
N8 |
C7 |
H7A |
219.1 |
300.0 |
| HN8 |
N8 |
C7 |
H7 |
159.1 |
240.0 |
| HN8 |
N8 |
C7 |
H7A |
39.0 |
120.0 |
| C11 |
C9 |
N8 |
HN8 |
357.5 |
0.0 |
| O10 |
C9 |
N8 |
HN8 |
177.4 |
179.9 |
| C16 |
C11 |
C12 |
H12 |
181.3 |
180.3 |
| C13 |
C12 |
C11 |
H12 |
180.0 |
180.0 |
| C11 |
C12 |
C13 |
H12 |
180.0 |
180.0 |
| C14 |
C13 |
C12 |
H12 |
180.9 |
180.0 |
| H13 |
C13 |
C12 |
H12 |
0.9 |
360.0 |
| C15 |
C14 |
C13 |
H13 |
177.3 |
180.0 |
| H14 |
C14 |
C13 |
H13 |
357.3 |
360.0 |
| C16 |
C15 |
C14 |
H14 |
182.0 |
179.7 |
| H15 |
C15 |
C14 |
H14 |
2.0 |
0.1 |
| CL17 |
C16 |
C15 |
H15 |
359.9 |
359.7 |
| C2 |
C18 |
H18 |
H18A |
120.0 |
120.0 |
| C2 |
C18 |
H18 |
H18B |
240.0 |
240.0 |
| H18A |
C18 |
H18 |
H18B |
120.0 |
120.0 |
| C2 |
C18 |
H18A |
H18 |
240.0 |
240.0 |
| C2 |
C18 |
H18A |
H18B |
120.0 |
120.0 |
| H18 |
C18 |
H18A |
H18B |
240.0 |
240.0 |
| C2 |
C18 |
H18B |
H18 |
120.0 |
120.0 |
| C2 |
C18 |
H18B |
H18A |
240.0 |
240.0 |
| H18 |
C18 |
H18B |
H18A |
120.0 |
120.0 |
| O22 |
C21 |
O20 |
C23 |
179.6 |
180.0 |
| O20 |
C21 |
C23 |
C28 |
220.4 |
180.0 |
| O20 |
C21 |
O22 |
C23 |
180.5 |
180.0 |
| O22 |
C21 |
C23 |
C28 |
40.8 |
360.0 |
| O20 |
C21 |
C23 |
O22 |
179.5 |
180.0 |
| C24 |
C23 |
C21 |
C28 |
179.8 |
180.3 |
| C21 |
C23 |
C28 |
C27 |
180.0 |
179.7 |
| C21 |
C23 |
C28 |
CL29 |
0.0 |
0.0 |
| C21 |
C23 |
C24 |
C28 |
180.2 |
179.7 |
| C24 |
C23 |
C28 |
C27 |
0.3 |
359.4 |
| C24 |
C23 |
C28 |
CL29 |
180.2 |
179.7 |
| C23 |
C28 |
C27 |
H27 |
180.3 |
180.3 |
| C25 |
C24 |
C23 |
C28 |
0.2 |
0.3 |
| C26 |
C25 |
C24 |
H25 |
180.0 |
180.1 |
| C24 |
C25 |
C26 |
C27 |
2.0 |
359.9 |
| C24 |
C25 |
C26 |
CL30 |
179.6 |
180.0 |
| H24 |
C24 |
C23 |
C28 |
180.2 |
180.2 |
| H24 |
C24 |
C25 |
C26 |
178.7 |
180.1 |
| H24 |
C24 |
C25 |
H25 |
358.7 |
360.0 |
| C26 |
C25 |
C24 |
H24 |
178.7 |
180.1 |
| C24 |
C25 |
C26 |
H25 |
180.0 |
179.9 |
| C27 |
C26 |
C25 |
CL30 |
182.5 |
180.0 |
| C25 |
C26 |
C27 |
H27 |
178.6 |
180.0 |
| H25 |
C25 |
C24 |
H24 |
358.7 |
360.0 |
| C24 |
C25 |
H25 |
C26 |
180.0 |
180.1 |
| H25 |
C25 |
C26 |
C27 |
182.1 |
180.1 |
| H25 |
C25 |
C26 |
CL30 |
359.6 |
0.1 |
| C23 |
C28 |
C27 |
C26 |
0.3 |
0.6 |
| C27 |
C26 |
C25 |
H25 |
182.1 |
180.1 |
| C25 |
C26 |
C27 |
CL30 |
177.8 |
180.0 |
| C28 |
C27 |
C26 |
H27 |
180.0 |
179.8 |
| CL30 |
C26 |
C25 |
H25 |
359.6 |
0.1 |
| C25 |
C26 |
CL30 |
C27 |
182.2 |
180.0 |
| CL30 |
C26 |
C27 |
H27 |
0.7 |
360.0 |
| C23 |
C28 |
C27 |
CL29 |
180.0 |
180.3 |
| C28 |
C27 |
C26 |
CL30 |
180.7 |
179.7 |
| C26 |
C27 |
C28 |
H27 |
180.0 |
180.2 |
| H27 |
C27 |
C26 |
CL30 |
0.7 |
360.0 |
| C23 |
C28 |
CL29 |
C27 |
180.0 |
179.7 |
| CL29 |
C28 |
C27 |
H27 |
0.3 |
0.0 |