PDB Chemical Component TY2

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for TY2

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N CA 1.462 1.462
CA C 1.536 1.536
CA CB 1.540 1.540
C O 1.226 1.226
C OXT 1.326 1.326
CB CG 1.500 1.500
CG CD1 1.400 1.400
CG CD2 1.407 1.407
CD1 CE1 1.405 1.405
CD2 CE2 1.386 1.386
CE1 CZ 1.396 1.396
CE2 CZ 1.380 1.380
CE2 NE2 1.343 1.343
CZ OH 1.388 1.388
N H 1.000 1.000
N H2 1.000 1.000
CA HA 1.100 1.100
CB HA1 1.100 1.100
CB HB2 1.100 1.100
OXT HXT 0.950 0.950
CD1 HD1 1.080 1.080
CD2 HC 1.080 1.080
CE1 HD 1.080 1.080
NE2 HE21 1.000 1.000
NE2 HE22 0.999 1.000
OH HH 0.950 0.950

Bond Angles for TY2

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
N CA C 112.2 112.2
N CA CB 112.1 112.1
CA N H 109.5 109.5
CA N H2 109.5 109.5
N CA HA 106.2 106.2
C CA CB 110.9 110.9
CA C O 121.1 121.1
CA C OXT 115.3 115.3
C CA HA 107.5 107.5
CA CB CG 107.5 107.5
CB CA HA 107.6 107.6
CA CB HA1 110.1 110.1
CA CB HB2 110.5 110.5
O C OXT 123.6 123.6
C OXT HXT 109.5 109.5
CB CG CD1 120.0 120.0
CB CG CD2 120.9 120.9
CG CB HA1 110.1 110.1
CG CB HB2 110.6 110.6
CD1 CG CD2 118.9 118.9
CG CD1 CE1 119.9 119.9
CG CD1 HD1 120.0 120.0
CG CD2 CE2 121.2 121.2
CG CD2 HC 119.4 119.4
CD1 CE1 CZ 119.4 119.4
CE1 CD1 HD1 120.1 120.1
CD1 CE1 HD 120.3 120.3
CD2 CE2 CZ 119.3 119.3
CD2 CE2 NE2 126.1 126.1
CE2 CD2 HC 119.4 119.4
CE1 CZ CE2 121.2 121.2
CE1 CZ OH 123.8 123.8
CZ CE1 HD 120.3 120.3
CZ CE2 NE2 114.5 114.5
CE2 CZ OH 115.0 115.0
CE2 NE2 HE21 109.5 109.5
CE2 NE2 HE22 109.5 109.5
CZ OH HH 109.5 109.5
H N H2 109.5 109.5
HA1 CB HB2 108.0 108.0
HE21 NE2 HE22 109.5 109.5

Torsion Angles for TY2

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C CA N CB 125.6 125.6
N CA C O 251.0 251.0
N CA C OXT 70.7 70.7
C CA N HA 242.8 242.8
N CA CB CG 202.9 202.9
CB CA N HA 117.2 117.2
N CA CB HA1 322.9 322.9
N CA CB HB2 82.1 82.1
H N CA H2 240.0 240.0
N CA C CB 233.7 233.7
C CA N H 54.5 54.5
C CA N H2 174.5 174.5
N CA C HA 116.4 116.4
C CA CB CG 76.6 76.6
CB CA C HA 242.6 242.6
C CA CB HA1 196.6 196.6
C CA CB HB2 315.8 315.8
O C CA OXT 180.3 180.3
CA C OXT HXT 180.3 180.3
N CA CB C 126.3 126.3
CB CA N H 288.9 288.9
CB CA N H2 48.9 48.9
N CA CB HA 243.6 243.6
CB CA C O 17.3 17.3
CB CA C OXT 197.0 197.0
C CA CB HA 117.3 117.3
CA CB CG CD1 73.8 73.8
CA CB CG CD2 259.1 259.1
CG CB CA HA1 240.0 240.0
CG CB CA HB2 120.8 120.8
HA1 CB CA HB2 240.8 240.8
O C CA CB 17.3 17.3
CA C O OXT 179.7 179.7
O C CA HA 134.6 134.6
O C OXT HXT 0.0 0.0
OXT C CA CB 197.0 197.0
CA C OXT O 180.3 180.3
OXT C CA HA 314.3 314.3
CG CB CA HA 319.3 319.3
CA CB CG HA1 120.0 120.0
CA CB CG HB2 239.2 239.2
CD1 CG CB CD2 174.7 174.7
CB CG CD1 CE1 183.4 183.4
CB CG CD1 HD1 3.4 3.4
CB CG CD2 CE2 175.7 175.7
CB CG CD2 HC 355.7 355.7
HA1 CB CG HB2 119.3 119.3
CB CG CD1 CD2 185.2 185.2
CD1 CG CB HA1 313.8 313.8
CD1 CG CB HB2 194.6 194.6
CD1 CG CD2 CE2 1.0 1.0
CD1 CG CD2 HC 180.9 180.9
CG CD1 CE1 CZ 0.7 0.7
CE1 CD1 CG HD1 180.0 180.0
CG CD1 CE1 HD 180.7 180.7
CB CG CD2 CD1 174.8 174.8
CD2 CG CB HA1 139.1 139.1
CD2 CG CB HB2 19.9 19.9
CD2 CG CD1 CE1 358.2 358.2
CD2 CG CD1 HD1 178.2 178.2
CG CD2 CE2 CZ 1.0 1.0
CG CD2 CE2 NE2 178.8 178.8
CE2 CD2 CG HC 180.0 180.0
CE1 CD1 CG CD2 358.2 358.2
CG CD1 CE1 HD1 180.0 180.0
CD1 CE1 CZ CE2 1.4 1.4
CD1 CE1 CZ OH 178.1 178.1
CZ CE1 CD1 HD 180.0 180.0
CG CD2 CE2 HC 180.0 180.0
CE1 CZ CE2 CD2 357.8 357.8
CZ CE2 CD2 NE2 182.2 182.2
CD2 CE2 CZ OH 180.8 180.8
CD2 CE2 NE2 HE21 160.6 160.6
CD2 CE2 NE2 HE22 280.6 280.6
CZ CE1 CD1 HD1 180.7 180.7
CD1 CE1 CZ HD 180.0 180.0
CD2 CE2 CZ CE1 357.8 357.8
CE1 CZ CE2 NE2 179.7 179.7
CE2 CZ CE1 OH 183.3 183.3
CE1 CZ OH HH 356.6 356.6
CD2 CE2 CZ NE2 178.0 178.0
CZ CE2 CD2 HC 181.1 181.1
CE1 CZ CE2 OH 177.0 177.0
CE2 CZ CE1 HD 181.4 181.4
CZ CE2 NE2 HE21 338.5 338.5
CZ CE2 NE2 HE22 98.5 98.5
CE2 CZ OH HH 173.5 173.5
CD2 CE2 NE2 CZ 182.1 182.1
NE2 CE2 CD2 HC 358.9 358.9
NE2 CE2 CZ OH 2.8 2.8
HE21 NE2 CE2 HE22 240.0 240.0
CE1 CZ OH CE2 183.1 183.1
OH CZ CE1 HD 358.0 358.0
OH CZ CE2 NE2 2.8 2.8
H N CA C 54.5 54.5
H N CA CB 288.9 288.9
CA N H H2 120.0 120.0
H N CA HA 171.7 171.7
H2 N CA C 174.5 174.5
H2 N CA CB 48.9 48.9
CA N H2 H 240.0 240.0
H2 N CA HA 291.7 291.7
N CA HA C 239.7 239.7
N CA HA CB 120.2 120.2
HA CA N H 171.7 171.7
HA CA N H2 291.7 291.7
C CA HA CB 240.5 240.5
HA CA C O 134.6 134.6
HA CA C OXT 314.3 314.3
HA CA CB CG 319.3 319.3
HA CA CB HA1 79.3 79.3
HA CA CB HB2 198.5 198.5
CA CB HA1 CG 241.6 241.6
HA1 CB CA HA 79.3 79.3
CA CB HA1 HB2 120.8 120.8
HA1 CB CG CD1 313.8 313.8
HA1 CB CG CD2 139.1 139.1
CG CB HA1 HB2 239.2 239.2
CA CB HB2 CG 119.0 119.0
HB2 CB CA HA 198.5 198.5
CA CB HB2 HA1 239.5 239.5
HB2 CB CG CD1 194.6 194.6
HB2 CB CG CD2 19.9 19.9
CG CB HB2 HA1 120.6 120.6
HD1 CD1 CG CD2 178.2 178.2
CG CD1 HD1 CE1 180.0 180.0
HD1 CD1 CE1 CZ 180.7 180.7
HD1 CD1 CE1 HD 0.7 0.7
CG CD2 HC CE2 180.0 180.0
HC CD2 CE2 CZ 181.1 181.1
HC CD2 CE2 NE2 358.9 358.9
CD1 CE1 HD CZ 180.0 180.0
HD CE1 CD1 HD1 0.7 0.7
HD CE1 CZ CE2 181.4 181.4
HD CE1 CZ OH 358.0 358.0
CE2 NE2 HE21 HE22 120.0 120.0
CE2 NE2 HE22 HE21 240.0 240.0