PDB Chemical Component TTQ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for TTQ
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N |
CA |
1.436 |
1.442 |
N |
H |
1.000 |
1.006 |
N |
H2 |
1.000 |
1.006 |
CA |
CB |
1.547 |
1.547 |
CA |
C |
1.537 |
1.521 |
CA |
HA |
1.100 |
1.096 |
C |
O |
1.241 |
1.227 |
C |
OXT |
1.336 |
1.355 |
CB |
CG |
1.498 |
1.477 |
CB |
HB2 |
1.100 |
1.109 |
CB |
HB3 |
1.100 |
1.110 |
CG |
CD2 |
1.483 |
1.423 |
CG |
CD1 |
1.362 |
1.376 |
CD1 |
NE1 |
1.344 |
1.370 |
CD1 |
HD1 |
1.080 |
1.081 |
CD2 |
CE3 |
1.430 |
1.409 |
CD2 |
CE2 |
1.400 |
1.396 |
NE1 |
CE2 |
1.367 |
1.377 |
NE1 |
HE1 |
1.000 |
1.010 |
CE2 |
CZ2 |
1.388 |
1.399 |
CE3 |
CZ3 |
1.373 |
1.399 |
CE3 |
HE3 |
1.080 |
1.087 |
CZ2 |
CH2 |
1.369 |
1.399 |
CZ2 |
O2 |
1.358 |
1.367 |
CZ3 |
CH2 |
1.374 |
1.393 |
CZ3 |
HZ3 |
1.081 |
1.089 |
CH2 |
N2 |
1.419 |
1.414 |
O2 |
HO2 |
0.950 |
0.968 |
N2 |
HN21 |
1.000 |
0.998 |
N2 |
HN22 |
1.000 |
0.998 |
OXT |
HXT |
0.950 |
0.980 |
Bond Angles for TTQ
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
CA |
N |
H |
109.5 |
119.0 |
CA |
N |
H2 |
109.5 |
119.0 |
N |
CA |
CB |
111.8 |
110.7 |
N |
CA |
C |
107.4 |
111.2 |
N |
CA |
HA |
111.1 |
106.2 |
H |
N |
H2 |
109.4 |
120.6 |
C |
CA |
CB |
114.3 |
111.1 |
CB |
CA |
HA |
103.8 |
110.6 |
CA |
CB |
CG |
118.5 |
114.1 |
CA |
CB |
HB2 |
106.5 |
108.9 |
CA |
CB |
HB3 |
104.5 |
108.6 |
C |
CA |
HA |
108.4 |
106.9 |
CA |
C |
O |
120.3 |
122.9 |
CA |
C |
OXT |
116.4 |
114.9 |
O |
C |
OXT |
123.2 |
122.2 |
C |
OXT |
HXT |
109.5 |
114.8 |
CG |
CB |
HB2 |
106.6 |
109.7 |
CG |
CB |
HB3 |
104.4 |
111.3 |
CB |
CG |
CD2 |
130.3 |
126.5 |
CB |
CG |
CD1 |
124.5 |
125.8 |
HB2 |
CB |
HB3 |
116.9 |
103.7 |
CD1 |
CG |
CD2 |
105.2 |
107.7 |
CG |
CD2 |
CE3 |
136.4 |
134.2 |
CG |
CD2 |
CE2 |
106.0 |
107.1 |
CG |
CD1 |
NE1 |
110.8 |
107.9 |
CG |
CD1 |
HD1 |
124.6 |
131.6 |
NE1 |
CD1 |
HD1 |
124.6 |
120.4 |
CD1 |
NE1 |
CE2 |
110.4 |
110.1 |
CD1 |
NE1 |
HE1 |
124.8 |
125.0 |
CE2 |
CD2 |
CE3 |
117.6 |
118.8 |
CD2 |
CE3 |
CZ3 |
118.4 |
119.2 |
CD2 |
CE3 |
HE3 |
120.8 |
120.9 |
CD2 |
CE2 |
NE1 |
107.7 |
107.1 |
CD2 |
CE2 |
CZ2 |
122.8 |
122.7 |
CE2 |
NE1 |
HE1 |
124.8 |
124.9 |
NE1 |
CE2 |
CZ2 |
129.5 |
130.2 |
CE2 |
CZ2 |
CH2 |
117.7 |
117.5 |
CE2 |
CZ2 |
O2 |
121.1 |
121.4 |
CZ3 |
CE3 |
HE3 |
120.8 |
119.9 |
CE3 |
CZ3 |
CH2 |
121.9 |
120.8 |
CE3 |
CZ3 |
HZ3 |
119.0 |
118.8 |
CH2 |
CZ2 |
O2 |
121.2 |
121.1 |
CZ2 |
CH2 |
CZ3 |
121.5 |
121.0 |
CZ2 |
CH2 |
N2 |
120.7 |
120.0 |
CZ2 |
O2 |
HO2 |
109.5 |
110.0 |
CH2 |
CZ3 |
HZ3 |
119.0 |
120.3 |
CZ3 |
CH2 |
N2 |
117.8 |
119.0 |
CH2 |
N2 |
HN21 |
109.5 |
119.0 |
CH2 |
N2 |
HN22 |
109.5 |
119.0 |
HN21 |
N2 |
HN22 |
109.4 |
121.7 |
Torsion Angles for TTQ
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
H |
N |
CA |
H2 |
240.0 |
166.6 |
C |
CA |
N |
CB |
126.2 |
124.0 |
CB |
CA |
N |
HA |
115.4 |
120.1 |
N |
CA |
CB |
CG |
57.5 |
202.6 |
N |
CA |
CB |
HB2 |
297.5 |
325.5 |
N |
CA |
CB |
HB3 |
173.2 |
77.8 |
C |
CA |
N |
HA |
241.6 |
244.1 |
N |
CA |
C |
O |
340.9 |
325.5 |
N |
CA |
C |
OXT |
157.2 |
145.1 |
CA |
N |
H |
H2 |
120.0 |
193.6 |
H |
N |
CA |
CB |
213.4 |
248.3 |
H |
N |
CA |
C |
339.5 |
12.2 |
H |
N |
CA |
HA |
98.0 |
128.2 |
CA |
N |
H2 |
H |
240.0 |
166.4 |
H2 |
N |
CA |
CB |
333.4 |
81.7 |
H2 |
N |
CA |
C |
99.5 |
205.6 |
H2 |
N |
CA |
HA |
218.0 |
321.6 |
CB |
CA |
N |
H |
213.4 |
248.3 |
CB |
CA |
N |
H2 |
333.4 |
81.7 |
N |
CA |
CB |
C |
122.3 |
124.0 |
N |
CA |
CB |
HA |
240.2 |
242.6 |
C |
CA |
CB |
HA |
117.9 |
118.6 |
CB |
CA |
C |
O |
105.6 |
89.2 |
CB |
CA |
C |
OXT |
281.8 |
268.8 |
CG |
CB |
CA |
HB2 |
120.0 |
237.1 |
CG |
CB |
CA |
HB3 |
244.3 |
124.8 |
CA |
CB |
CG |
CD2 |
266.1 |
89.9 |
CA |
CB |
CG |
CD1 |
90.5 |
270.1 |
HB2 |
CB |
CA |
HB3 |
124.3 |
247.7 |
C |
CA |
N |
H |
339.5 |
12.2 |
C |
CA |
N |
H2 |
99.5 |
205.6 |
N |
CA |
C |
CB |
235.4 |
236.3 |
N |
CA |
C |
HA |
120.2 |
115.4 |
CB |
CA |
C |
HA |
244.8 |
239.2 |
C |
CA |
CB |
CG |
295.2 |
78.6 |
C |
CA |
CB |
HB2 |
175.2 |
201.5 |
C |
CA |
CB |
HB3 |
50.9 |
313.8 |
O |
C |
CA |
OXT |
183.8 |
180.4 |
CA |
C |
OXT |
HXT |
183.9 |
180.4 |
HA |
CA |
N |
H |
98.0 |
128.2 |
HA |
CA |
N |
H2 |
218.0 |
321.6 |
N |
CA |
HA |
CB |
120.3 |
120.1 |
N |
CA |
HA |
C |
242.2 |
241.3 |
C |
CA |
HA |
CB |
238.1 |
238.9 |
HA |
CA |
CB |
CG |
177.3 |
320.0 |
HA |
CA |
CB |
HB2 |
57.3 |
82.8 |
HA |
CA |
CB |
HB3 |
293.0 |
195.1 |
HA |
CA |
C |
O |
220.8 |
210.0 |
HA |
CA |
C |
OXT |
37.0 |
29.6 |
O |
C |
CA |
CB |
105.6 |
89.2 |
O |
C |
CA |
HA |
220.8 |
210.0 |
CA |
C |
O |
OXT |
176.0 |
179.6 |
O |
C |
OXT |
HXT |
0.0 |
360.0 |
OXT |
C |
CA |
CB |
281.8 |
268.8 |
OXT |
C |
CA |
HA |
37.0 |
29.6 |
CA |
C |
OXT |
O |
183.9 |
180.4 |
CG |
CB |
CA |
HA |
177.3 |
320.0 |
CA |
CB |
CG |
HB2 |
240.0 |
122.5 |
CA |
CB |
CG |
HB3 |
115.7 |
236.6 |
HB2 |
CB |
CG |
HB3 |
235.7 |
114.2 |
CD1 |
CG |
CB |
CD2 |
184.5 |
180.1 |
CB |
CG |
CD2 |
CE3 |
4.2 |
0.1 |
CB |
CG |
CD2 |
CE2 |
182.8 |
180.1 |
CB |
CG |
CD1 |
NE1 |
177.2 |
179.9 |
CB |
CG |
CD1 |
HD1 |
357.2 |
359.9 |
HB2 |
CB |
CA |
HA |
57.3 |
82.8 |
CA |
CB |
HB2 |
CG |
127.4 |
234.5 |
CA |
CB |
HB2 |
HB3 |
243.7 |
115.5 |
CG |
CB |
HB2 |
HB3 |
116.3 |
241.0 |
HB2 |
CB |
CG |
CD2 |
26.0 |
327.4 |
HB2 |
CB |
CG |
CD1 |
210.5 |
147.6 |
HB3 |
CB |
CA |
HA |
293.0 |
195.1 |
CA |
CB |
HB3 |
CG |
234.9 |
126.5 |
CA |
CB |
HB3 |
HB2 |
117.4 |
244.3 |
CG |
CB |
HB3 |
HB2 |
242.6 |
117.8 |
HB3 |
CB |
CG |
CD2 |
150.3 |
213.3 |
HB3 |
CB |
CG |
CD1 |
334.8 |
33.4 |
CD2 |
CG |
CB |
HB2 |
26.0 |
327.4 |
CD2 |
CG |
CB |
HB3 |
150.3 |
213.3 |
CB |
CG |
CD2 |
CD1 |
183.8 |
180.1 |
CD2 |
CG |
CD1 |
NE1 |
0.7 |
0.1 |
CD2 |
CG |
CD1 |
HD1 |
180.7 |
180.0 |
CE2 |
CD2 |
CG |
CE3 |
178.7 |
179.9 |
CG |
CD2 |
CE3 |
CZ3 |
180.7 |
180.0 |
CG |
CD2 |
CE3 |
HE3 |
0.7 |
360.0 |
CG |
CD2 |
CE2 |
NE1 |
0.9 |
0.1 |
CG |
CD2 |
CE2 |
CZ2 |
179.8 |
180.0 |
CD1 |
CG |
CB |
HB2 |
210.5 |
147.6 |
CD1 |
CG |
CB |
HB3 |
334.8 |
33.4 |
CB |
CG |
CD1 |
CD2 |
176.5 |
179.9 |
CD1 |
CG |
CD2 |
CE3 |
180.3 |
180.0 |
CD1 |
CG |
CD2 |
CE2 |
359.0 |
359.9 |
NE1 |
CD1 |
CG |
HD1 |
180.0 |
180.1 |
CG |
CD1 |
NE1 |
CE2 |
359.9 |
360.0 |
CG |
CD1 |
NE1 |
HE1 |
179.9 |
180.0 |
NE1 |
CD1 |
CG |
CD2 |
0.7 |
0.1 |
CG |
CD1 |
NE1 |
HD1 |
180.0 |
179.9 |
CD2 |
CE2 |
NE1 |
CD1 |
359.5 |
360.0 |
CE2 |
NE1 |
CD1 |
HE1 |
180.0 |
180.0 |
CD1 |
NE1 |
CE2 |
CZ2 |
180.7 |
180.0 |
HD1 |
CD1 |
CG |
CD2 |
180.7 |
180.0 |
CG |
CD1 |
HD1 |
NE1 |
180.0 |
180.1 |
HD1 |
CD1 |
NE1 |
CE2 |
179.9 |
180.0 |
HD1 |
CD1 |
NE1 |
HE1 |
359.9 |
0.1 |
CG |
CD2 |
CE3 |
CE2 |
178.6 |
179.9 |
CE3 |
CD2 |
CE2 |
NE1 |
179.9 |
180.0 |
CE3 |
CD2 |
CE2 |
CZ2 |
358.7 |
360.0 |
CZ3 |
CE3 |
CD2 |
HE3 |
180.0 |
180.0 |
CD2 |
CE3 |
CZ3 |
CH2 |
357.7 |
359.9 |
CD2 |
CE3 |
CZ3 |
HZ3 |
177.7 |
180.0 |
CG |
CD2 |
CE2 |
CE3 |
181.0 |
180.0 |
CD1 |
NE1 |
CE2 |
CD2 |
359.5 |
360.0 |
CE2 |
CD2 |
CE3 |
CZ3 |
2.1 |
0.1 |
CE2 |
CD2 |
CE3 |
HE3 |
182.1 |
180.0 |
CD2 |
CE2 |
NE1 |
HE1 |
179.5 |
180.0 |
NE1 |
CE2 |
CD2 |
CZ2 |
181.2 |
180.0 |
CD2 |
CE2 |
CZ2 |
CH2 |
0.5 |
0.0 |
CD2 |
CE2 |
CZ2 |
O2 |
180.9 |
180.0 |
CE2 |
NE1 |
CD1 |
HD1 |
179.9 |
180.0 |
CD1 |
NE1 |
CE2 |
HE1 |
180.0 |
180.0 |
NE1 |
CE2 |
CD2 |
CE3 |
179.9 |
180.0 |
CD2 |
CE2 |
NE1 |
CZ2 |
178.7 |
180.0 |
NE1 |
CE2 |
CZ2 |
CH2 |
179.0 |
180.0 |
NE1 |
CE2 |
CZ2 |
O2 |
359.5 |
360.0 |
HE1 |
NE1 |
CD1 |
HD1 |
359.9 |
0.1 |
CD1 |
NE1 |
HE1 |
CE2 |
180.0 |
180.0 |
HE1 |
NE1 |
CE2 |
CZ2 |
0.7 |
360.0 |
CZ2 |
CE2 |
CD2 |
CE3 |
358.7 |
360.0 |
CD2 |
CE2 |
CZ2 |
NE1 |
181.4 |
180.0 |
CZ2 |
CE2 |
NE1 |
HE1 |
0.7 |
360.0 |
CH2 |
CZ2 |
CE2 |
O2 |
179.5 |
180.0 |
CE2 |
CZ2 |
CH2 |
CZ3 |
359.4 |
360.0 |
CE2 |
CZ2 |
CH2 |
N2 |
180.3 |
180.0 |
CE2 |
CZ2 |
O2 |
HO2 |
352.4 |
301.6 |
CD2 |
CE3 |
CZ3 |
HE3 |
180.0 |
180.0 |
CZ2 |
CH2 |
CZ3 |
CE3 |
1.5 |
0.1 |
CH2 |
CZ3 |
CE3 |
HZ3 |
180.0 |
179.9 |
CE3 |
CZ3 |
CH2 |
N2 |
180.7 |
180.0 |
CD2 |
CE3 |
HE3 |
CZ3 |
180.0 |
180.0 |
HE3 |
CE3 |
CZ3 |
CH2 |
177.7 |
179.9 |
HE3 |
CE3 |
CZ3 |
HZ3 |
357.7 |
0.0 |
CE2 |
CZ2 |
CH2 |
O2 |
180.5 |
180.0 |
CE3 |
CZ3 |
CH2 |
CZ2 |
1.5 |
0.1 |
CH2 |
CZ2 |
O2 |
HO2 |
172.8 |
121.6 |
CZ2 |
CH2 |
CZ3 |
HZ3 |
181.6 |
180.0 |
CZ3 |
CH2 |
CZ2 |
N2 |
179.2 |
179.9 |
CZ2 |
CH2 |
N2 |
HN21 |
288.2 |
279.4 |
CZ2 |
CH2 |
N2 |
HN22 |
48.2 |
105.7 |
CE2 |
CZ2 |
O2 |
CH2 |
179.5 |
180.0 |
O2 |
CZ2 |
CH2 |
CZ3 |
179.0 |
180.0 |
O2 |
CZ2 |
CH2 |
N2 |
359.8 |
0.0 |
CH2 |
CZ3 |
CE3 |
HE3 |
177.7 |
179.9 |
CE3 |
CZ3 |
CH2 |
HZ3 |
180.0 |
180.1 |
CZ3 |
CH2 |
CZ2 |
O2 |
179.0 |
180.0 |
CZ2 |
CH2 |
CZ3 |
N2 |
180.8 |
180.1 |
CZ3 |
CH2 |
N2 |
HN21 |
109.0 |
99.5 |
CZ3 |
CH2 |
N2 |
HN22 |
229.0 |
285.8 |
HZ3 |
CZ3 |
CE3 |
HE3 |
357.7 |
0.0 |
CE3 |
CZ3 |
HZ3 |
CH2 |
180.0 |
179.9 |
HZ3 |
CZ3 |
CH2 |
N2 |
0.7 |
359.9 |
N2 |
CH2 |
CZ2 |
O2 |
359.8 |
0.0 |
CZ2 |
CH2 |
N2 |
CZ3 |
179.2 |
179.9 |
N2 |
CH2 |
CZ3 |
HZ3 |
0.7 |
359.9 |
HN21 |
N2 |
CH2 |
HN22 |
240.0 |
173.7 |
CH2 |
N2 |
HN21 |
HN22 |
120.0 |
186.5 |
CH2 |
N2 |
HN22 |
HN21 |
240.0 |
173.5 |