PDB Chemical Component TTQ

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for TTQ

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N CA 1.436 1.442
N H 1.000 1.006
N H2 1.000 1.006
CA CB 1.547 1.547
CA C 1.537 1.521
CA HA 1.100 1.096
C O 1.241 1.227
C OXT 1.336 1.355
CB CG 1.498 1.477
CB HB2 1.100 1.109
CB HB3 1.100 1.110
CG CD2 1.483 1.423
CG CD1 1.362 1.376
CD1 NE1 1.344 1.370
CD1 HD1 1.080 1.081
CD2 CE3 1.430 1.409
CD2 CE2 1.400 1.396
NE1 CE2 1.367 1.377
NE1 HE1 1.000 1.010
CE2 CZ2 1.388 1.399
CE3 CZ3 1.373 1.399
CE3 HE3 1.080 1.087
CZ2 CH2 1.369 1.399
CZ2 O2 1.358 1.367
CZ3 CH2 1.374 1.393
CZ3 HZ3 1.081 1.089
CH2 N2 1.419 1.414
O2 HO2 0.950 0.968
N2 HN21 1.000 0.998
N2 HN22 1.000 0.998
OXT HXT 0.950 0.980

Bond Angles for TTQ

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CA N H 109.5 119.0
CA N H2 109.5 119.0
N CA CB 111.8 110.7
N CA C 107.4 111.2
N CA HA 111.1 106.2
H N H2 109.4 120.6
C CA CB 114.3 111.1
CB CA HA 103.8 110.6
CA CB CG 118.5 114.1
CA CB HB2 106.5 108.9
CA CB HB3 104.5 108.6
C CA HA 108.4 106.9
CA C O 120.3 122.9
CA C OXT 116.4 114.9
O C OXT 123.2 122.2
C OXT HXT 109.5 114.8
CG CB HB2 106.6 109.7
CG CB HB3 104.4 111.3
CB CG CD2 130.3 126.5
CB CG CD1 124.5 125.8
HB2 CB HB3 116.9 103.7
CD1 CG CD2 105.2 107.7
CG CD2 CE3 136.4 134.2
CG CD2 CE2 106.0 107.1
CG CD1 NE1 110.8 107.9
CG CD1 HD1 124.6 131.6
NE1 CD1 HD1 124.6 120.4
CD1 NE1 CE2 110.4 110.1
CD1 NE1 HE1 124.8 125.0
CE2 CD2 CE3 117.6 118.8
CD2 CE3 CZ3 118.4 119.2
CD2 CE3 HE3 120.8 120.9
CD2 CE2 NE1 107.7 107.1
CD2 CE2 CZ2 122.8 122.7
CE2 NE1 HE1 124.8 124.9
NE1 CE2 CZ2 129.5 130.2
CE2 CZ2 CH2 117.7 117.5
CE2 CZ2 O2 121.1 121.4
CZ3 CE3 HE3 120.8 119.9
CE3 CZ3 CH2 121.9 120.8
CE3 CZ3 HZ3 119.0 118.8
CH2 CZ2 O2 121.2 121.1
CZ2 CH2 CZ3 121.5 121.0
CZ2 CH2 N2 120.7 120.0
CZ2 O2 HO2 109.5 110.0
CH2 CZ3 HZ3 119.0 120.3
CZ3 CH2 N2 117.8 119.0
CH2 N2 HN21 109.5 119.0
CH2 N2 HN22 109.5 119.0
HN21 N2 HN22 109.4 121.7

Torsion Angles for TTQ

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
H N CA H2 240.0 166.6
C CA N CB 126.2 124.0
CB CA N HA 115.4 120.1
N CA CB CG 57.5 202.6
N CA CB HB2 297.5 325.5
N CA CB HB3 173.2 77.8
C CA N HA 241.6 244.1
N CA C O 340.9 325.5
N CA C OXT 157.2 145.1
CA N H H2 120.0 193.6
H N CA CB 213.4 248.3
H N CA C 339.5 12.2
H N CA HA 98.0 128.2
CA N H2 H 240.0 166.4
H2 N CA CB 333.4 81.7
H2 N CA C 99.5 205.6
H2 N CA HA 218.0 321.6
CB CA N H 213.4 248.3
CB CA N H2 333.4 81.7
N CA CB C 122.3 124.0
N CA CB HA 240.2 242.6
C CA CB HA 117.9 118.6
CB CA C O 105.6 89.2
CB CA C OXT 281.8 268.8
CG CB CA HB2 120.0 237.1
CG CB CA HB3 244.3 124.8
CA CB CG CD2 266.1 89.9
CA CB CG CD1 90.5 270.1
HB2 CB CA HB3 124.3 247.7
C CA N H 339.5 12.2
C CA N H2 99.5 205.6
N CA C CB 235.4 236.3
N CA C HA 120.2 115.4
CB CA C HA 244.8 239.2
C CA CB CG 295.2 78.6
C CA CB HB2 175.2 201.5
C CA CB HB3 50.9 313.8
O C CA OXT 183.8 180.4
CA C OXT HXT 183.9 180.4
HA CA N H 98.0 128.2
HA CA N H2 218.0 321.6
N CA HA CB 120.3 120.1
N CA HA C 242.2 241.3
C CA HA CB 238.1 238.9
HA CA CB CG 177.3 320.0
HA CA CB HB2 57.3 82.8
HA CA CB HB3 293.0 195.1
HA CA C O 220.8 210.0
HA CA C OXT 37.0 29.6
O C CA CB 105.6 89.2
O C CA HA 220.8 210.0
CA C O OXT 176.0 179.6
O C OXT HXT 0.0 360.0
OXT C CA CB 281.8 268.8
OXT C CA HA 37.0 29.6
CA C OXT O 183.9 180.4
CG CB CA HA 177.3 320.0
CA CB CG HB2 240.0 122.5
CA CB CG HB3 115.7 236.6
HB2 CB CG HB3 235.7 114.2
CD1 CG CB CD2 184.5 180.1
CB CG CD2 CE3 4.2 0.1
CB CG CD2 CE2 182.8 180.1
CB CG CD1 NE1 177.2 179.9
CB CG CD1 HD1 357.2 359.9
HB2 CB CA HA 57.3 82.8
CA CB HB2 CG 127.4 234.5
CA CB HB2 HB3 243.7 115.5
CG CB HB2 HB3 116.3 241.0
HB2 CB CG CD2 26.0 327.4
HB2 CB CG CD1 210.5 147.6
HB3 CB CA HA 293.0 195.1
CA CB HB3 CG 234.9 126.5
CA CB HB3 HB2 117.4 244.3
CG CB HB3 HB2 242.6 117.8
HB3 CB CG CD2 150.3 213.3
HB3 CB CG CD1 334.8 33.4
CD2 CG CB HB2 26.0 327.4
CD2 CG CB HB3 150.3 213.3
CB CG CD2 CD1 183.8 180.1
CD2 CG CD1 NE1 0.7 0.1
CD2 CG CD1 HD1 180.7 180.0
CE2 CD2 CG CE3 178.7 179.9
CG CD2 CE3 CZ3 180.7 180.0
CG CD2 CE3 HE3 0.7 360.0
CG CD2 CE2 NE1 0.9 0.1
CG CD2 CE2 CZ2 179.8 180.0
CD1 CG CB HB2 210.5 147.6
CD1 CG CB HB3 334.8 33.4
CB CG CD1 CD2 176.5 179.9
CD1 CG CD2 CE3 180.3 180.0
CD1 CG CD2 CE2 359.0 359.9
NE1 CD1 CG HD1 180.0 180.1
CG CD1 NE1 CE2 359.9 360.0
CG CD1 NE1 HE1 179.9 180.0
NE1 CD1 CG CD2 0.7 0.1
CG CD1 NE1 HD1 180.0 179.9
CD2 CE2 NE1 CD1 359.5 360.0
CE2 NE1 CD1 HE1 180.0 180.0
CD1 NE1 CE2 CZ2 180.7 180.0
HD1 CD1 CG CD2 180.7 180.0
CG CD1 HD1 NE1 180.0 180.1
HD1 CD1 NE1 CE2 179.9 180.0
HD1 CD1 NE1 HE1 359.9 0.1
CG CD2 CE3 CE2 178.6 179.9
CE3 CD2 CE2 NE1 179.9 180.0
CE3 CD2 CE2 CZ2 358.7 360.0
CZ3 CE3 CD2 HE3 180.0 180.0
CD2 CE3 CZ3 CH2 357.7 359.9
CD2 CE3 CZ3 HZ3 177.7 180.0
CG CD2 CE2 CE3 181.0 180.0
CD1 NE1 CE2 CD2 359.5 360.0
CE2 CD2 CE3 CZ3 2.1 0.1
CE2 CD2 CE3 HE3 182.1 180.0
CD2 CE2 NE1 HE1 179.5 180.0
NE1 CE2 CD2 CZ2 181.2 180.0
CD2 CE2 CZ2 CH2 0.5 0.0
CD2 CE2 CZ2 O2 180.9 180.0
CE2 NE1 CD1 HD1 179.9 180.0
CD1 NE1 CE2 HE1 180.0 180.0
NE1 CE2 CD2 CE3 179.9 180.0
CD2 CE2 NE1 CZ2 178.7 180.0
NE1 CE2 CZ2 CH2 179.0 180.0
NE1 CE2 CZ2 O2 359.5 360.0
HE1 NE1 CD1 HD1 359.9 0.1
CD1 NE1 HE1 CE2 180.0 180.0
HE1 NE1 CE2 CZ2 0.7 360.0
CZ2 CE2 CD2 CE3 358.7 360.0
CD2 CE2 CZ2 NE1 181.4 180.0
CZ2 CE2 NE1 HE1 0.7 360.0
CH2 CZ2 CE2 O2 179.5 180.0
CE2 CZ2 CH2 CZ3 359.4 360.0
CE2 CZ2 CH2 N2 180.3 180.0
CE2 CZ2 O2 HO2 352.4 301.6
CD2 CE3 CZ3 HE3 180.0 180.0
CZ2 CH2 CZ3 CE3 1.5 0.1
CH2 CZ3 CE3 HZ3 180.0 179.9
CE3 CZ3 CH2 N2 180.7 180.0
CD2 CE3 HE3 CZ3 180.0 180.0
HE3 CE3 CZ3 CH2 177.7 179.9
HE3 CE3 CZ3 HZ3 357.7 0.0
CE2 CZ2 CH2 O2 180.5 180.0
CE3 CZ3 CH2 CZ2 1.5 0.1
CH2 CZ2 O2 HO2 172.8 121.6
CZ2 CH2 CZ3 HZ3 181.6 180.0
CZ3 CH2 CZ2 N2 179.2 179.9
CZ2 CH2 N2 HN21 288.2 279.4
CZ2 CH2 N2 HN22 48.2 105.7
CE2 CZ2 O2 CH2 179.5 180.0
O2 CZ2 CH2 CZ3 179.0 180.0
O2 CZ2 CH2 N2 359.8 0.0
CH2 CZ3 CE3 HE3 177.7 179.9
CE3 CZ3 CH2 HZ3 180.0 180.1
CZ3 CH2 CZ2 O2 179.0 180.0
CZ2 CH2 CZ3 N2 180.8 180.1
CZ3 CH2 N2 HN21 109.0 99.5
CZ3 CH2 N2 HN22 229.0 285.8
HZ3 CZ3 CE3 HE3 357.7 0.0
CE3 CZ3 HZ3 CH2 180.0 179.9
HZ3 CZ3 CH2 N2 0.7 359.9
N2 CH2 CZ2 O2 359.8 0.0
CZ2 CH2 N2 CZ3 179.2 179.9
N2 CH2 CZ3 HZ3 0.7 359.9
HN21 N2 CH2 HN22 240.0 173.7
CH2 N2 HN21 HN22 120.0 186.5
CH2 N2 HN22 HN21 240.0 173.5