PDB Chemical Component TQV
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for TQV
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
P |
O1P |
1.559 |
1.609 |
P |
O2P |
1.609 |
1.610 |
P |
O3P |
1.447 |
1.480 |
P |
O4P |
|
1.610 |
C1 |
C2 |
1.387 |
1.387 |
C1 |
O2P |
1.408 |
1.359 |
C1 |
C6 |
1.402 |
1.388 |
C2 |
C3 |
1.389 |
1.382 |
O1P |
C8 |
1.422 |
1.429 |
C3 |
C4 |
1.389 |
1.383 |
C4 |
C5 |
1.387 |
1.383 |
C5 |
C6 |
1.384 |
1.381 |
C6 |
C7 |
1.507 |
1.506 |
C8 |
C9 |
1.389 |
1.507 |
C9 |
C10 |
1.393 |
1.382 |
C9 |
C14 |
1.397 |
1.387 |
C10 |
C11 |
1.389 |
1.382 |
C11 |
C12 |
1.397 |
1.382 |
C12 |
C13 |
1.394 |
1.381 |
C13 |
C14 |
1.394 |
1.387 |
C14 |
O15 |
1.366 |
1.360 |
C2 |
H2 |
1.080 |
1.080 |
C3 |
H3 |
1.080 |
1.080 |
C4 |
H4 |
1.080 |
1.080 |
C5 |
H5 |
1.080 |
1.080 |
C7 |
H7 |
1.100 |
1.091 |
C7 |
H7A |
1.100 |
1.090 |
C7 |
H7B |
1.100 |
1.090 |
C8 |
H8 |
1.101 |
1.090 |
C8 |
H8A |
1.100 |
1.091 |
C10 |
H10 |
1.080 |
1.081 |
C11 |
H11 |
1.080 |
1.080 |
C12 |
H12 |
1.080 |
1.080 |
C13 |
H13 |
1.079 |
1.080 |
O15 |
HO15 |
0.950 |
0.967 |
O4P |
H4P |
|
0.967 |
Bond Angles for TQV
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1P |
P |
O2P |
100.9 |
109.5 |
O1P |
P |
O3P |
110.4 |
109.5 |
O1P |
P |
O4P |
|
109.5 |
P |
O1P |
C8 |
124.5 |
123.0 |
O2P |
P |
O3P |
113.8 |
109.5 |
O2P |
P |
O4P |
|
109.5 |
P |
O2P |
C1 |
136.2 |
114.0 |
O3P |
P |
O4P |
|
109.5 |
P |
O4P |
H4P |
|
114.0 |
C2 |
C1 |
O2P |
122.3 |
120.0 |
C2 |
C1 |
C6 |
118.6 |
119.9 |
C1 |
C2 |
C3 |
120.6 |
119.9 |
C1 |
C2 |
H2 |
119.7 |
120.0 |
O2P |
C1 |
C6 |
118.7 |
120.0 |
C1 |
C6 |
C5 |
120.7 |
119.9 |
C1 |
C6 |
C7 |
122.2 |
120.1 |
C2 |
C3 |
C4 |
120.2 |
120.0 |
C3 |
C2 |
H2 |
119.7 |
120.0 |
C2 |
C3 |
H3 |
119.9 |
120.0 |
O1P |
C8 |
C9 |
110.9 |
109.5 |
O1P |
C8 |
H8 |
109.1 |
109.5 |
O1P |
C8 |
H8A |
109.1 |
109.5 |
C3 |
C4 |
C5 |
119.7 |
120.1 |
C4 |
C3 |
H3 |
119.9 |
120.0 |
C3 |
C4 |
H4 |
120.1 |
119.9 |
C4 |
C5 |
C6 |
120.0 |
120.1 |
C5 |
C4 |
H4 |
120.1 |
120.0 |
C4 |
C5 |
H5 |
120.0 |
120.0 |
C5 |
C6 |
C7 |
116.9 |
120.0 |
C6 |
C5 |
H5 |
120.0 |
119.9 |
C6 |
C7 |
H7 |
109.5 |
109.4 |
C6 |
C7 |
H7A |
109.5 |
109.5 |
C6 |
C7 |
H7B |
109.5 |
109.5 |
C8 |
C9 |
C10 |
120.2 |
120.0 |
C8 |
C9 |
C14 |
119.3 |
120.1 |
C9 |
C8 |
H8 |
109.1 |
109.4 |
C9 |
C8 |
H8A |
109.1 |
109.4 |
C10 |
C9 |
C14 |
120.5 |
119.9 |
C9 |
C10 |
C11 |
119.6 |
120.1 |
C9 |
C10 |
H10 |
120.2 |
119.9 |
C9 |
C14 |
C13 |
120.0 |
119.9 |
C9 |
C14 |
O15 |
117.2 |
120.0 |
C10 |
C11 |
C12 |
120.0 |
120.1 |
C11 |
C10 |
H10 |
120.2 |
120.0 |
C10 |
C11 |
H11 |
120.0 |
119.9 |
C11 |
C12 |
C13 |
120.6 |
120.1 |
C12 |
C11 |
H11 |
120.0 |
119.9 |
C11 |
C12 |
H12 |
119.7 |
120.0 |
C12 |
C13 |
C14 |
119.3 |
119.9 |
C13 |
C12 |
H12 |
119.7 |
120.0 |
C12 |
C13 |
H13 |
120.3 |
120.0 |
C13 |
C14 |
O15 |
122.8 |
120.1 |
C14 |
C13 |
H13 |
120.3 |
120.0 |
C14 |
O15 |
HO15 |
109.5 |
114.0 |
H7 |
C7 |
H7A |
109.5 |
109.5 |
H7 |
C7 |
H7B |
109.5 |
109.5 |
H7A |
C7 |
H7B |
109.4 |
109.5 |
H8 |
C8 |
H8A |
109.5 |
109.5 |
Torsion Angles for TQV
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O2P |
P |
O1P |
O3P |
120.6 |
120.0 |
O2P |
P |
O1P |
O4P |
|
240.0 |
O1P |
P |
O2P |
C1 |
28.7 |
185.0 |
O3P |
P |
O1P |
O4P |
|
120.0 |
O1P |
P |
O4P |
H4P |
|
300.0 |
P |
O1P |
C8 |
C9 |
103.2 |
180.0 |
P |
O1P |
C8 |
H8 |
223.4 |
300.0 |
P |
O1P |
C8 |
H8A |
343.0 |
60.0 |
O1P |
P |
O2P |
O3P |
241.8 |
240.0 |
O1P |
P |
O2P |
O4P |
|
120.1 |
O2P |
P |
O1P |
C8 |
85.3 |
175.0 |
O3P |
P |
O2P |
O4P |
|
240.0 |
O2P |
P |
O4P |
H4P |
|
60.1 |
C2 |
C1 |
O2P |
P |
347.4 |
75.0 |
P |
O2P |
C1 |
C6 |
174.8 |
255.3 |
O1P |
P |
O3P |
O2P |
112.6 |
120.0 |
O1P |
P |
O3P |
O4P |
|
240.0 |
O3P |
P |
O1P |
C8 |
324.7 |
55.0 |
O2P |
P |
O3P |
O4P |
|
120.0 |
O3P |
P |
O2P |
C1 |
146.9 |
305.0 |
O3P |
P |
O4P |
H4P |
|
180.0 |
O1P |
P |
O4P |
O2P |
|
240.0 |
O1P |
P |
O4P |
O3P |
|
120.0 |
O4P |
P |
O1P |
C8 |
|
295.0 |
O2P |
P |
O4P |
O3P |
|
240.0 |
O4P |
P |
O2P |
C1 |
|
65.0 |
P |
O2P |
C1 |
C2 |
347.4 |
75.0 |
O2P |
C1 |
C2 |
C6 |
187.5 |
180.3 |
C2 |
C1 |
C6 |
C5 |
6.1 |
0.6 |
C2 |
C1 |
C6 |
C7 |
180.3 |
180.0 |
C1 |
C2 |
C3 |
C4 |
2.3 |
0.0 |
C3 |
C2 |
C1 |
H2 |
180.0 |
180.0 |
C1 |
C2 |
C3 |
H3 |
182.3 |
180.0 |
C1 |
O2P |
P |
O3P |
146.9 |
305.0 |
C1 |
O2P |
P |
O4P |
|
65.0 |
C2 |
C1 |
O2P |
C6 |
172.5 |
179.7 |
O2P |
C1 |
C2 |
C3 |
182.2 |
180.0 |
O2P |
C1 |
C2 |
H2 |
2.2 |
360.0 |
O2P |
C1 |
C6 |
C5 |
178.9 |
180.3 |
O2P |
C1 |
C6 |
C7 |
353.2 |
359.7 |
C2 |
C1 |
C6 |
O2P |
187.2 |
180.3 |
C6 |
C1 |
C2 |
C3 |
354.8 |
359.7 |
C6 |
C1 |
C2 |
H2 |
174.7 |
179.7 |
C4 |
C5 |
C6 |
C1 |
356.0 |
359.4 |
C5 |
C6 |
C1 |
C7 |
185.8 |
180.6 |
C1 |
C6 |
C5 |
H5 |
176.0 |
179.8 |
C1 |
C6 |
C7 |
H7 |
93.1 |
90.0 |
C1 |
C6 |
C7 |
H7A |
213.1 |
210.0 |
C1 |
C6 |
C7 |
H7B |
333.1 |
330.1 |
C3 |
C2 |
C1 |
O2P |
182.2 |
180.0 |
C3 |
C2 |
C1 |
C6 |
354.8 |
359.7 |
C1 |
C2 |
C3 |
H2 |
180.0 |
180.0 |
C2 |
C3 |
C4 |
C5 |
359.9 |
360.0 |
C4 |
C3 |
C2 |
H3 |
180.0 |
180.0 |
C2 |
C3 |
C4 |
H4 |
179.9 |
180.0 |
C8 |
O1P |
P |
O2P |
85.3 |
175.0 |
C8 |
O1P |
P |
O3P |
324.7 |
55.0 |
C8 |
O1P |
P |
O4P |
|
295.0 |
O1P |
C8 |
C9 |
C10 |
337.5 |
0.0 |
O1P |
C8 |
C9 |
C14 |
157.6 |
179.7 |
C9 |
C8 |
O1P |
H8 |
239.8 |
240.0 |
C9 |
C8 |
O1P |
H8A |
120.2 |
120.0 |
H8 |
C8 |
O1P |
H8A |
240.4 |
240.0 |
C4 |
C3 |
C2 |
H2 |
182.3 |
180.0 |
C2 |
C3 |
C4 |
H3 |
180.0 |
180.0 |
C3 |
C4 |
C5 |
C6 |
0.9 |
0.3 |
C5 |
C4 |
C3 |
H4 |
180.0 |
180.0 |
C3 |
C4 |
C5 |
H5 |
180.9 |
180.0 |
C1 |
C6 |
C5 |
C4 |
356.0 |
359.4 |
C5 |
C4 |
C3 |
H3 |
179.9 |
180.0 |
C3 |
C4 |
C5 |
H4 |
180.0 |
180.0 |
C4 |
C5 |
C6 |
C7 |
181.5 |
180.0 |
C6 |
C5 |
C4 |
H5 |
180.0 |
180.4 |
C1 |
C6 |
C5 |
C7 |
174.5 |
179.4 |
C6 |
C5 |
C4 |
H4 |
180.9 |
180.3 |
C4 |
C5 |
C6 |
H5 |
180.0 |
179.6 |
C5 |
C6 |
C7 |
H7 |
267.5 |
269.4 |
C5 |
C6 |
C7 |
H7A |
27.6 |
29.4 |
C5 |
C6 |
C7 |
H7B |
147.5 |
149.5 |
C1 |
C6 |
C7 |
C5 |
185.5 |
180.6 |
C7 |
C6 |
C5 |
H5 |
1.5 |
0.4 |
H7 |
C7 |
C6 |
H7A |
240.0 |
240.0 |
H7 |
C7 |
C6 |
H7B |
120.0 |
120.0 |
H7A |
C7 |
C6 |
H7B |
240.0 |
239.9 |
O1P |
C8 |
C9 |
H8 |
120.2 |
120.1 |
O1P |
C8 |
C9 |
H8A |
239.8 |
240.0 |
C10 |
C9 |
C8 |
C14 |
179.9 |
180.3 |
C8 |
C9 |
C10 |
C11 |
180.5 |
179.9 |
C8 |
C9 |
C10 |
H10 |
0.5 |
360.0 |
C8 |
C9 |
C14 |
C13 |
179.4 |
179.7 |
C8 |
C9 |
C14 |
O15 |
359.6 |
0.0 |
H8 |
C8 |
C9 |
H8A |
119.6 |
120.0 |
C8 |
C9 |
C10 |
C14 |
180.1 |
179.7 |
C10 |
C9 |
C8 |
H8 |
217.3 |
240.0 |
C10 |
C9 |
C8 |
H8A |
97.8 |
120.0 |
C10 |
C9 |
C14 |
C13 |
359.5 |
359.4 |
C10 |
C9 |
C14 |
O15 |
179.7 |
179.7 |
C9 |
C10 |
C11 |
C12 |
0.0 |
0.0 |
C11 |
C10 |
C9 |
H10 |
180.0 |
180.0 |
C9 |
C10 |
C11 |
H11 |
180.0 |
179.9 |
C8 |
C9 |
C14 |
C10 |
179.9 |
180.3 |
C14 |
C9 |
C8 |
H8 |
37.4 |
59.7 |
C14 |
C9 |
C8 |
H8A |
277.9 |
299.7 |
C14 |
C9 |
C10 |
C11 |
0.3 |
0.2 |
C14 |
C9 |
C10 |
H10 |
180.3 |
180.3 |
C12 |
C13 |
C14 |
C9 |
0.2 |
0.7 |
C13 |
C14 |
C9 |
O15 |
179.8 |
179.7 |
C9 |
C14 |
C13 |
H13 |
180.3 |
180.3 |
C9 |
C14 |
O15 |
HO15 |
180.0 |
90.0 |
C11 |
C10 |
C9 |
C14 |
0.3 |
0.2 |
C9 |
C10 |
C11 |
H10 |
180.0 |
180.0 |
C10 |
C11 |
C12 |
C13 |
359.8 |
0.0 |
C12 |
C11 |
C10 |
H11 |
180.0 |
180.1 |
C10 |
C11 |
C12 |
H12 |
179.8 |
179.9 |
C12 |
C11 |
C10 |
H10 |
180.0 |
180.0 |
C10 |
C11 |
C12 |
H11 |
180.0 |
179.9 |
C11 |
C12 |
C13 |
C14 |
0.1 |
359.6 |
C13 |
C12 |
C11 |
H12 |
180.0 |
180.1 |
C11 |
C12 |
C13 |
H13 |
180.1 |
180.0 |
C9 |
C14 |
C13 |
C12 |
0.2 |
0.7 |
C13 |
C12 |
C11 |
H11 |
179.8 |
180.1 |
C11 |
C12 |
C13 |
H12 |
180.0 |
179.9 |
C12 |
C13 |
C14 |
O15 |
180.1 |
180.3 |
C14 |
C13 |
C12 |
H13 |
180.0 |
179.6 |
C9 |
C14 |
C13 |
O15 |
180.2 |
180.3 |
C14 |
C13 |
C12 |
H12 |
180.1 |
179.7 |
C12 |
C13 |
C14 |
H13 |
180.0 |
180.4 |
C13 |
C14 |
O15 |
HO15 |
0.2 |
270.3 |
C9 |
C14 |
O15 |
C13 |
179.8 |
179.7 |
O15 |
C14 |
C13 |
H13 |
0.1 |
360.0 |
H2 |
C2 |
C1 |
O2P |
2.2 |
360.0 |
H2 |
C2 |
C1 |
C6 |
174.7 |
179.7 |
C1 |
C2 |
H2 |
C3 |
180.0 |
180.0 |
H2 |
C2 |
C3 |
C4 |
182.3 |
180.0 |
H2 |
C2 |
C3 |
H3 |
2.4 |
360.0 |
C2 |
C3 |
H3 |
C4 |
180.0 |
180.0 |
H3 |
C3 |
C2 |
H2 |
2.4 |
360.0 |
H3 |
C3 |
C4 |
C5 |
179.9 |
180.0 |
H3 |
C3 |
C4 |
H4 |
359.9 |
0.0 |
C3 |
C4 |
H4 |
C5 |
180.0 |
180.0 |
H4 |
C4 |
C3 |
H3 |
359.9 |
0.0 |
H4 |
C4 |
C5 |
C6 |
180.9 |
180.3 |
H4 |
C4 |
C5 |
H5 |
0.9 |
359.9 |
C4 |
C5 |
H5 |
C6 |
180.0 |
180.4 |
H5 |
C5 |
C4 |
H4 |
0.9 |
359.9 |
H5 |
C5 |
C6 |
C7 |
1.5 |
0.4 |
C6 |
C7 |
H7 |
H7A |
120.0 |
120.0 |
C6 |
C7 |
H7 |
H7B |
240.0 |
240.0 |
H7A |
C7 |
H7 |
H7B |
120.0 |
120.1 |
C6 |
C7 |
H7A |
H7 |
239.9 |
240.1 |
C6 |
C7 |
H7A |
H7B |
120.0 |
120.0 |
H7 |
C7 |
H7A |
H7B |
240.0 |
240.0 |
C6 |
C7 |
H7B |
H7 |
120.1 |
119.9 |
C6 |
C7 |
H7B |
H7A |
240.0 |
240.0 |
H7 |
C7 |
H7B |
H7A |
120.0 |
120.1 |
O1P |
C8 |
H8 |
C9 |
238.7 |
239.9 |
O1P |
C8 |
H8 |
H8A |
119.4 |
120.0 |
H8 |
C8 |
C9 |
C10 |
217.3 |
240.0 |
H8 |
C8 |
C9 |
C14 |
37.4 |
59.7 |
C9 |
C8 |
H8 |
H8A |
240.6 |
240.1 |
O1P |
C8 |
H8A |
C9 |
121.3 |
120.0 |
O1P |
C8 |
H8A |
H8 |
240.6 |
240.0 |
H8A |
C8 |
C9 |
C10 |
97.8 |
120.0 |
H8A |
C8 |
C9 |
C14 |
277.9 |
299.7 |
C9 |
C8 |
H8A |
H8 |
119.4 |
119.9 |
H10 |
C10 |
C9 |
C14 |
180.3 |
180.3 |
C9 |
C10 |
H10 |
C11 |
180.0 |
180.0 |
H10 |
C10 |
C11 |
C12 |
180.0 |
180.0 |
H10 |
C10 |
C11 |
H11 |
0.0 |
359.9 |
C10 |
C11 |
H11 |
C12 |
180.0 |
180.1 |
H11 |
C11 |
C10 |
H10 |
0.0 |
359.9 |
H11 |
C11 |
C12 |
C13 |
179.8 |
180.1 |
H11 |
C11 |
C12 |
H12 |
359.8 |
0.0 |
C11 |
C12 |
H12 |
C13 |
180.0 |
180.1 |
H12 |
C12 |
C11 |
H11 |
359.8 |
0.0 |
H12 |
C12 |
C13 |
C14 |
180.1 |
179.7 |
H12 |
C12 |
C13 |
H13 |
0.1 |
0.1 |
C12 |
C13 |
H13 |
C14 |
180.0 |
179.6 |
H13 |
C13 |
C12 |
H12 |
0.1 |
0.1 |
H13 |
C13 |
C14 |
O15 |
0.1 |
360.0 |