PDB Chemical Component TQQ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for TQQ
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N |
CA |
1.443 |
1.441 |
N |
H |
1.000 |
1.006 |
N |
H2 |
1.000 |
1.006 |
CA |
C |
1.535 |
1.521 |
CA |
CB |
1.536 |
1.548 |
CA |
HA |
1.100 |
1.096 |
C |
O |
1.231 |
1.227 |
C |
OXT |
|
1.355 |
OXT |
HXT |
|
0.980 |
CB |
CG |
1.498 |
1.476 |
CB |
HB2 |
1.100 |
1.109 |
CB |
HB3 |
1.100 |
1.110 |
CG |
CD1 |
1.357 |
1.380 |
CG |
CD2 |
1.467 |
1.409 |
CD1 |
NE1 |
1.360 |
1.375 |
CD1 |
HD1 |
1.079 |
1.081 |
CD2 |
CE2 |
1.401 |
1.379 |
CD2 |
CE3 |
1.400 |
1.420 |
NE1 |
CE2 |
1.365 |
1.370 |
NE1 |
HE1 |
1.000 |
1.011 |
CE2 |
CZ2 |
1.366 |
1.435 |
CE3 |
CZ3 |
1.380 |
1.342 |
CE3 |
HE3 |
1.080 |
1.085 |
CZ2 |
CH2 |
1.306 |
1.521 |
CZ2 |
O2 |
1.372 |
1.222 |
CZ3 |
CH2 |
1.408 |
1.493 |
CZ3 |
HZ3 |
1.080 |
1.084 |
CH2 |
N2 |
1.446 |
1.292 |
N2 |
HN2 |
1.000 |
1.024 |
Bond Angles for TQQ
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
CA |
N |
H |
109.5 |
119.0 |
CA |
N |
H2 |
109.5 |
119.0 |
N |
CA |
C |
109.6 |
111.1 |
N |
CA |
CB |
109.1 |
110.7 |
N |
CA |
HA |
111.8 |
106.2 |
H |
N |
H2 |
109.5 |
120.6 |
C |
CA |
CB |
115.0 |
111.1 |
C |
CA |
HA |
105.4 |
106.9 |
CA |
C |
O |
120.8 |
123.0 |
CA |
C |
OXT |
|
114.8 |
CB |
CA |
HA |
105.9 |
110.6 |
CA |
CB |
CG |
117.6 |
114.1 |
CA |
CB |
HB2 |
105.0 |
108.8 |
CA |
CB |
HB3 |
106.9 |
108.5 |
O |
C |
OXT |
|
122.2 |
C |
OXT |
HXT |
|
114.9 |
CG |
CB |
HB2 |
105.0 |
109.7 |
CG |
CB |
HB3 |
106.9 |
111.4 |
CB |
CG |
CD1 |
123.5 |
125.9 |
CB |
CG |
CD2 |
131.0 |
127.5 |
HB2 |
CB |
HB3 |
116.0 |
103.7 |
CD1 |
CG |
CD2 |
105.4 |
106.5 |
CG |
CD1 |
NE1 |
111.2 |
108.3 |
CG |
CD1 |
HD1 |
124.4 |
131.6 |
CG |
CD2 |
CE2 |
106.0 |
108.6 |
CG |
CD2 |
CE3 |
136.0 |
131.2 |
NE1 |
CD1 |
HD1 |
124.4 |
120.2 |
CD1 |
NE1 |
CE2 |
108.8 |
109.4 |
CD1 |
NE1 |
HE1 |
125.6 |
125.2 |
CE2 |
CD2 |
CE3 |
118.0 |
120.3 |
CD2 |
CE2 |
NE1 |
108.5 |
107.2 |
CD2 |
CE2 |
CZ2 |
123.6 |
124.8 |
CD2 |
CE3 |
CZ3 |
117.5 |
121.8 |
CD2 |
CE3 |
HE3 |
121.3 |
119.1 |
CE2 |
NE1 |
HE1 |
125.6 |
125.4 |
NE1 |
CE2 |
CZ2 |
127.9 |
128.0 |
CE2 |
CZ2 |
CH2 |
117.8 |
113.7 |
CE2 |
CZ2 |
O2 |
117.6 |
126.7 |
CZ3 |
CE3 |
HE3 |
121.2 |
119.1 |
CE3 |
CZ3 |
CH2 |
120.8 |
120.2 |
CE3 |
CZ3 |
HZ3 |
119.6 |
121.4 |
CH2 |
CZ2 |
O2 |
124.7 |
119.6 |
CZ2 |
CH2 |
CZ3 |
122.3 |
119.1 |
CZ2 |
CH2 |
N2 |
113.5 |
117.0 |
CH2 |
CZ3 |
HZ3 |
119.6 |
118.3 |
CZ3 |
CH2 |
N2 |
124.2 |
123.9 |
CH2 |
N2 |
HN2 |
110.4 |
109.2 |
Torsion Angles for TQQ
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
H |
N |
CA |
H2 |
120.0 |
166.7 |
C |
CA |
N |
CB |
126.7 |
124.0 |
C |
CA |
N |
HA |
243.6 |
244.1 |
N |
CA |
C |
O |
348.3 |
325.4 |
N |
CA |
C |
OXT |
|
145.1 |
CB |
CA |
N |
HA |
116.8 |
120.1 |
N |
CA |
CB |
CG |
62.6 |
182.6 |
N |
CA |
CB |
HB2 |
306.4 |
305.5 |
N |
CA |
CB |
HB3 |
182.6 |
57.7 |
CA |
N |
H |
H2 |
239.9 |
193.5 |
H |
N |
CA |
C |
36.3 |
323.5 |
H |
N |
CA |
CB |
269.5 |
199.5 |
H |
N |
CA |
HA |
152.7 |
79.4 |
CA |
N |
H2 |
H |
120.0 |
166.5 |
H2 |
N |
CA |
C |
276.2 |
156.8 |
H2 |
N |
CA |
CB |
149.5 |
32.8 |
H2 |
N |
CA |
HA |
32.7 |
272.7 |
C |
CA |
N |
H |
36.3 |
323.5 |
C |
CA |
N |
H2 |
276.2 |
156.8 |
N |
CA |
C |
CB |
236.7 |
236.3 |
N |
CA |
C |
HA |
120.4 |
115.4 |
CB |
CA |
C |
HA |
243.7 |
239.2 |
C |
CA |
CB |
CG |
299.1 |
58.6 |
C |
CA |
CB |
HB2 |
182.8 |
181.5 |
C |
CA |
CB |
HB3 |
59.1 |
293.7 |
O |
C |
CA |
OXT |
|
180.3 |
CA |
C |
OXT |
HXT |
|
180.3 |
CB |
CA |
N |
H |
269.5 |
199.5 |
CB |
CA |
N |
H2 |
149.5 |
32.8 |
N |
CA |
CB |
C |
123.6 |
124.0 |
N |
CA |
CB |
HA |
239.5 |
242.6 |
C |
CA |
CB |
HA |
116.0 |
118.6 |
CB |
CA |
C |
O |
111.6 |
89.1 |
CB |
CA |
C |
OXT |
|
268.8 |
CG |
CB |
CA |
HB2 |
116.2 |
237.1 |
CG |
CB |
CA |
HB3 |
240.0 |
124.9 |
CA |
CB |
CG |
CD1 |
90.8 |
270.1 |
CA |
CB |
CG |
CD2 |
266.7 |
90.0 |
HB2 |
CB |
CA |
HB3 |
123.8 |
247.8 |
HA |
CA |
N |
H |
152.7 |
79.4 |
HA |
CA |
N |
H2 |
32.7 |
272.7 |
N |
CA |
HA |
C |
241.0 |
241.3 |
N |
CA |
HA |
CB |
118.7 |
120.1 |
C |
CA |
HA |
CB |
237.7 |
238.8 |
HA |
CA |
C |
O |
227.8 |
209.9 |
HA |
CA |
C |
OXT |
|
29.7 |
HA |
CA |
CB |
CG |
183.1 |
300.0 |
HA |
CA |
CB |
HB2 |
66.9 |
62.9 |
HA |
CA |
CB |
HB3 |
303.1 |
175.1 |
O |
C |
CA |
CB |
111.6 |
89.1 |
O |
C |
CA |
HA |
227.8 |
209.9 |
CA |
C |
O |
OXT |
|
179.7 |
O |
C |
OXT |
HXT |
|
0.0 |
OXT |
C |
CA |
CB |
|
268.8 |
OXT |
C |
CA |
HA |
|
29.7 |
CA |
C |
OXT |
O |
|
180.3 |
CG |
CB |
CA |
HA |
183.1 |
300.0 |
CA |
CB |
CG |
HB2 |
243.8 |
122.4 |
CA |
CB |
CG |
HB3 |
120.0 |
236.7 |
HB2 |
CB |
CG |
HB3 |
236.2 |
114.3 |
CD1 |
CG |
CB |
CD2 |
184.1 |
180.1 |
CB |
CG |
CD1 |
NE1 |
177.1 |
179.9 |
CB |
CG |
CD1 |
HD1 |
357.1 |
359.8 |
CB |
CG |
CD2 |
CE2 |
183.0 |
180.1 |
CB |
CG |
CD2 |
CE3 |
3.0 |
0.1 |
HB2 |
CB |
CA |
HA |
66.9 |
62.9 |
CA |
CB |
HB2 |
CG |
124.6 |
234.5 |
CA |
CB |
HB2 |
HB3 |
242.3 |
115.3 |
CG |
CB |
HB2 |
HB3 |
117.7 |
240.9 |
HB2 |
CB |
CG |
CD1 |
207.0 |
147.7 |
HB2 |
CB |
CG |
CD2 |
22.9 |
327.6 |
HB3 |
CB |
CA |
HA |
303.1 |
175.1 |
CA |
CB |
HB3 |
CG |
233.3 |
126.5 |
CA |
CB |
HB3 |
HB2 |
116.7 |
244.4 |
CG |
CB |
HB3 |
HB2 |
243.3 |
117.9 |
HB3 |
CB |
CG |
CD1 |
330.7 |
33.4 |
HB3 |
CB |
CG |
CD2 |
146.7 |
213.3 |
CD1 |
CG |
CB |
HB2 |
207.0 |
147.7 |
CD1 |
CG |
CB |
HB3 |
330.7 |
33.4 |
CB |
CG |
CD1 |
CD2 |
176.8 |
179.9 |
CD1 |
CG |
CD2 |
CE2 |
359.5 |
359.9 |
CD1 |
CG |
CD2 |
CE3 |
179.4 |
180.0 |
NE1 |
CD1 |
CG |
HD1 |
180.0 |
180.1 |
CG |
CD1 |
NE1 |
CE2 |
0.0 |
360.0 |
CG |
CD1 |
NE1 |
HE1 |
180.0 |
180.0 |
CD2 |
CG |
CB |
HB2 |
22.9 |
327.6 |
CD2 |
CG |
CB |
HB3 |
146.7 |
213.3 |
CB |
CG |
CD2 |
CD1 |
183.5 |
180.1 |
CD2 |
CG |
CD1 |
NE1 |
0.3 |
0.1 |
CD2 |
CG |
CD1 |
HD1 |
180.3 |
179.9 |
CE2 |
CD2 |
CG |
CE3 |
180.1 |
180.0 |
CG |
CD2 |
CE2 |
NE1 |
0.5 |
0.0 |
CG |
CD2 |
CE2 |
CZ2 |
179.0 |
180.0 |
CG |
CD2 |
CE3 |
CZ3 |
180.2 |
180.0 |
CG |
CD2 |
CE3 |
HE3 |
0.2 |
360.0 |
NE1 |
CD1 |
CG |
CD2 |
0.3 |
0.1 |
CG |
CD1 |
NE1 |
HD1 |
180.0 |
179.9 |
CD2 |
CE2 |
NE1 |
CD1 |
359.7 |
0.0 |
CE2 |
NE1 |
CD1 |
HE1 |
180.0 |
180.0 |
CD1 |
NE1 |
CE2 |
CZ2 |
181.3 |
180.1 |
HD1 |
CD1 |
CG |
CD2 |
180.3 |
179.9 |
CG |
CD1 |
HD1 |
NE1 |
180.0 |
180.1 |
HD1 |
CD1 |
NE1 |
CE2 |
180.0 |
180.1 |
HD1 |
CD1 |
NE1 |
HE1 |
0.0 |
0.1 |
CG |
CD2 |
CE2 |
CE3 |
179.9 |
180.0 |
CD1 |
NE1 |
CE2 |
CD2 |
359.7 |
0.0 |
CE2 |
CD2 |
CE3 |
CZ3 |
0.1 |
0.0 |
CE2 |
CD2 |
CE3 |
HE3 |
180.1 |
180.0 |
CD2 |
CE2 |
NE1 |
HE1 |
179.6 |
180.0 |
NE1 |
CE2 |
CD2 |
CZ2 |
181.5 |
180.1 |
CD2 |
CE2 |
CZ2 |
CH2 |
0.8 |
0.0 |
CD2 |
CE2 |
CZ2 |
O2 |
181.5 |
180.0 |
CG |
CD2 |
CE3 |
CE2 |
180.1 |
180.0 |
CE3 |
CD2 |
CE2 |
NE1 |
180.6 |
180.0 |
CE3 |
CD2 |
CE2 |
CZ2 |
359.0 |
359.9 |
CZ3 |
CE3 |
CD2 |
HE3 |
180.0 |
180.0 |
CD2 |
CE3 |
CZ3 |
CH2 |
0.8 |
0.0 |
CD2 |
CE3 |
CZ3 |
HZ3 |
180.8 |
180.0 |
CE2 |
NE1 |
CD1 |
HD1 |
180.0 |
180.1 |
CD1 |
NE1 |
CE2 |
HE1 |
180.0 |
180.0 |
NE1 |
CE2 |
CD2 |
CE3 |
180.6 |
180.0 |
CD2 |
CE2 |
NE1 |
CZ2 |
178.4 |
179.9 |
NE1 |
CE2 |
CZ2 |
CH2 |
179.0 |
179.9 |
NE1 |
CE2 |
CZ2 |
O2 |
359.7 |
359.9 |
HE1 |
NE1 |
CD1 |
HD1 |
0.0 |
0.1 |
CD1 |
NE1 |
HE1 |
CE2 |
180.0 |
179.9 |
HE1 |
NE1 |
CE2 |
CZ2 |
1.3 |
0.0 |
CZ2 |
CE2 |
CD2 |
CE3 |
359.0 |
359.9 |
CD2 |
CE2 |
CZ2 |
NE1 |
181.8 |
180.1 |
CZ2 |
CE2 |
NE1 |
HE1 |
1.3 |
0.0 |
CH2 |
CZ2 |
CE2 |
O2 |
179.3 |
180.0 |
CE2 |
CZ2 |
CH2 |
CZ3 |
0.2 |
0.0 |
CE2 |
CZ2 |
CH2 |
N2 |
180.6 |
180.0 |
CD2 |
CE3 |
CZ3 |
HE3 |
180.0 |
180.0 |
CZ2 |
CH2 |
CZ3 |
CE3 |
359.0 |
359.9 |
CH2 |
CZ3 |
CE3 |
HZ3 |
180.0 |
180.0 |
CE3 |
CZ3 |
CH2 |
N2 |
178.6 |
180.0 |
CD2 |
CE3 |
HE3 |
CZ3 |
180.0 |
180.0 |
HE3 |
CE3 |
CZ3 |
CH2 |
180.8 |
180.1 |
HE3 |
CE3 |
CZ3 |
HZ3 |
0.8 |
0.0 |
CE2 |
CZ2 |
CH2 |
O2 |
180.8 |
180.0 |
CE3 |
CZ3 |
CH2 |
CZ2 |
359.0 |
359.9 |
CZ2 |
CH2 |
CZ3 |
HZ3 |
179.0 |
180.0 |
CZ3 |
CH2 |
CZ2 |
N2 |
179.6 |
180.1 |
CZ2 |
CH2 |
N2 |
HN2 |
359.9 |
0.1 |
CE2 |
CZ2 |
O2 |
CH2 |
179.2 |
180.0 |
O2 |
CZ2 |
CH2 |
CZ3 |
179.4 |
180.1 |
O2 |
CZ2 |
CH2 |
N2 |
359.8 |
0.0 |
CH2 |
CZ3 |
CE3 |
HE3 |
180.8 |
180.1 |
CE3 |
CZ3 |
CH2 |
HZ3 |
180.0 |
180.0 |
CZ3 |
CH2 |
CZ2 |
O2 |
179.4 |
180.1 |
CZ2 |
CH2 |
CZ3 |
N2 |
180.4 |
179.9 |
CZ3 |
CH2 |
N2 |
HN2 |
180.2 |
180.0 |
HZ3 |
CZ3 |
CE3 |
HE3 |
0.8 |
0.0 |
CE3 |
CZ3 |
HZ3 |
CH2 |
180.0 |
180.0 |
HZ3 |
CZ3 |
CH2 |
N2 |
358.6 |
0.1 |
N2 |
CH2 |
CZ2 |
O2 |
359.8 |
0.0 |
CZ2 |
CH2 |
N2 |
CZ3 |
179.6 |
180.1 |
N2 |
CH2 |
CZ3 |
HZ3 |
358.6 |
0.1 |