PDB Chemical Component TNR

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for TNR

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
OXT	C	1.227	1.342
OXT	HB	0.950	0.966
C	O	1.226	1.208
C	CA	1.540	1.507
CA	N	1.463	1.468
CA	CB	1.534	1.529
CA	HCA	1.114	1.090
N	H	1.019	1.009
N	H2	1.021	1.010
CB	O1	1.421	1.429
CB	HB2	1.114	1.089
CB	HB3	1.115	1.090
O1	C1	1.430	1.428
C1	C2	1.519	1.531
C1	O5	1.422	1.425
C1	HC1	1.114	1.089
C2	N2	1.437	1.464
C2	C3	1.506	1.531
C2	HC2	1.116	1.090
N2	C7	1.321	1.347
N2	HN2	1.020	0.971
C7	C8	1.504	1.507
C7	O7	1.214	1.213
C8	HC81	1.115	1.090
C8	HC82	1.115	1.089
C8	HC83	1.115	1.090
C3	O3	1.422	1.429
C3	C4	1.509	1.533
C3	HC3	1.115	1.090
O3	HO3	0.951	0.967
C4	O4	1.426	1.428
C4	C5	1.523	1.531
C4	HC4	1.115	1.090
O4	HO4	0.951	0.967
C5	O5	1.436	1.426
C5	C6	1.517	1.529
C5	HC5	1.114	1.089
C6	O6	1.429	1.429
C6	HC61	1.115	1.090
C6	HC62	1.115	1.089
O6	HO6	0.950	0.967

Bond Angles for TNR

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C	OXT	HB	119.2	120.0
OXT	C	O	119.2	120.0
OXT	C	CA	120.4	120.0
O	C	CA	120.4	120.0
C	CA	N	111.7	109.4
C	CA	CB	111.5	109.5
C	CA	HCA	106.7	109.5
N	CA	CB	109.9	109.5
N	CA	HCA	108.4	109.5
CA	N	H	111.7	106.8
CA	N	H2	111.4	106.7
CB	CA	HCA	108.5	109.5
CA	CB	O1	111.5	109.5
CA	CB	HB2	111.5	109.5
CA	CB	HB3	111.5	109.5
H	N	H2	111.3	106.6
O1	CB	HB2	111.4	109.5
O1	CB	HB3	111.4	109.4
CB	O1	C1	118.9	106.8
HB2	CB	HB3	98.9	109.5
O1	C1	C2	108.5	109.2
O1	C1	O5	109.9	109.4
O1	C1	HC1	110.4	109.4
C2	C1	O5	111.0	109.8
C2	C1	HC1	109.2	109.5
C1	C2	N2	106.4	109.6
C1	C2	C3	109.5	109.1
C1	C2	HC2	112.2	109.5
O5	C1	HC1	107.9	109.4
C1	O5	C5	114.0	107.8
N2	C2	C3	111.5	109.6
N2	C2	HC2	110.2	109.4
C2	N2	C7	119.9	120.1
C2	N2	HN2	124.2	119.9
C3	C2	HC2	107.1	109.6
C2	C3	O3	108.2	109.6
C2	C3	C4	107.5	108.7
C2	C3	HC3	111.3	109.6
C7	N2	HN2	115.9	120.0
N2	C7	C8	116.6	120.0
N2	C7	O7	120.4	120.0
C8	C7	O7	123.1	120.0
C7	C8	HC81	116.6	109.5
C7	C8	HC82	109.6	109.4
C7	C8	HC83	109.6	109.5
HC81	C8	HC82	109.6	109.4
HC81	C8	HC83	109.7	109.5
HC82	C8	HC83	100.6	109.6
O3	C3	C4	108.4	109.8
O3	C3	HC3	110.4	109.6
C3	O3	HO3	108.2	106.8
C4	C3	HC3	111.0	109.6
C3	C4	O4	107.1	109.5
C3	C4	C5	110.9	109.0
C3	C4	HC4	109.9	109.5
O4	C4	C5	108.6	109.7
O4	C4	HC4	112.1	109.5
C4	O4	HO4	107.1	106.8
C5	C4	HC4	108.3	109.5
C4	C5	O5	113.2	109.8
C4	C5	C6	108.7	109.4
C4	C5	HC5	107.0	109.4
O5	C5	C6	107.7	109.4
O5	C5	HC5	107.9	109.4
C6	C5	HC5	112.5	109.5
C5	C6	O6	108.3	109.4
C5	C6	HC61	112.6	109.5
C5	C6	HC62	112.7	109.5
O6	C6	HC61	112.6	109.4
O6	C6	HC62	112.6	109.5
C6	O6	HO6	108.3	106.8
HC61	C6	HC62	97.8	109.5

Torsion Angles for TNR

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O	C	OXT	CA	181.1	179.9
OXT	C	CA	N	339.2	150.0
OXT	C	CA	CB	102.6	270.0
OXT	C	CA	HCA	220.9	30.0
HB	OXT	C	O	180.0	360.0
HB	OXT	C	CA	358.9	180.1
O	C	OXT	HB	180.0	360.0
OXT	C	O	CA	178.9	180.1
O	C	CA	N	158.1	330.1
O	C	CA	CB	281.5	90.1
O	C	CA	HCA	39.9	210.1
CA	C	OXT	HB	358.9	180.1
OXT	C	CA	O	181.1	179.9
N	CA	C	CB	236.6	240.0
N	CA	C	HCA	118.2	120.0
C	CA	N	H	180.0	60.0
C	CA	N	H2	54.8	173.8
CB	CA	C	HCA	241.7	240.0
C	CA	CB	O1	319.1	180.0
C	CA	CB	HB2	84.3	60.0
C	CA	CB	HB3	193.9	300.0
C	CA	N	CB	124.3	120.0
C	CA	N	HCA	242.8	240.0
CB	CA	N	HCA	118.5	120.0
N	CA	CB	O1	83.5	300.0
N	CA	CB	HB2	208.7	180.0
N	CA	CB	HB3	318.2	60.0
H	N	CA	H2	125.2	246.3
C	CA	CB	N	235.6	240.0
C	CA	CB	HCA	117.2	120.0
N	CA	CB	HCA	241.6	240.0
CB	CA	N	H	55.7	300.0
CB	CA	N	H2	290.5	53.8
O1	CB	CA	HB2	234.7	120.0
O1	CB	CA	HB3	125.2	240.0
CA	CB	O1	C1	146.7	180.0
HB2	CB	CA	HB3	250.5	120.0
C	CA	HCA	N	120.4	120.0
C	CA	HCA	CB	239.7	240.0
N	CA	HCA	CB	119.4	120.0
HCA	CA	N	H	297.2	180.0
HCA	CA	N	H2	172.0	293.7
HCA	CA	CB	O1	201.8	60.0
HCA	CA	CB	HB2	327.1	300.0
HCA	CA	CB	HB3	76.6	180.0
H	N	CA	CB	55.7	300.0
H	N	CA	HCA	297.2	180.0
CA	N	H	H2	234.8	113.8
H2	N	CA	CB	290.5	53.8
H2	N	CA	HCA	172.0	293.7
CA	N	H2	H	125.4	246.2
O1	CB	CA	HCA	201.8	60.0
CA	CB	O1	HB2	125.3	239.9
CA	CB	O1	HB3	234.7	120.0
HB2	CB	O1	HB3	109.4	240.1
CB	O1	C1	C2	208.9	180.2
CB	O1	C1	O5	87.4	60.0
CB	O1	C1	HC1	328.5	300.1
HB2	CB	CA	HCA	327.1	300.0
CA	CB	HB2	O1	234.7	120.1
CA	CB	HB2	HB3	117.4	240.0
O1	CB	HB2	HB3	242.7	119.9
HB2	CB	O1	C1	21.4	300.0
HB3	CB	CA	HCA	76.6	180.0
CA	CB	HB3	O1	125.3	240.0
CA	CB	HB3	HB2	242.6	120.0
O1	CB	HB3	HB2	117.3	240.1
HB3	CB	O1	C1	272.0	60.0
C1	O1	CB	HB2	21.4	300.0
C1	O1	CB	HB3	272.0	60.0
C2	C1	O1	O5	121.5	120.2
C2	C1	O1	HC1	240.4	240.1
O1	C1	C2	N2	60.1	61.1
O1	C1	C2	C3	299.5	301.1
O1	C1	C2	HC2	180.7	181.1
O5	C1	O1	HC1	118.9	119.9
O1	C1	O5	C5	65.2	52.4
O1	C1	C2	O5	239.2	240.0
O1	C1	C2	HC1	120.4	119.8
O5	C1	C2	HC1	241.2	239.8
C2	C1	O5	C5	305.2	292.6
N2	C2	C1	C3	120.6	120.0
N2	C2	C1	HC2	239.4	239.9
C1	C2	N2	C7	131.4	90.2
C1	C2	N2	HN2	311.3	270.1
C3	C2	C1	HC2	118.8	120.0
C1	C2	C3	O3	182.6	186.4
C1	C2	C3	C4	299.4	306.4
C1	C2	C3	HC3	61.2	66.1
O1	C1	O5	C2	120.0	119.8
O1	C1	O5	HC1	239.6	240.1
C2	C1	O5	HC1	119.6	120.3
O5	C1	C2	N2	180.9	181.1
O5	C1	C2	C3	60.3	61.1
O5	C1	C2	HC2	301.5	301.1
C4	C5	O5	C1	50.9	67.5
C1	O5	C5	C6	171.1	187.6
C1	O5	C5	HC5	292.7	307.5
O1	C1	HC1	C2	240.8	240.3
O1	C1	HC1	O5	120.1	119.9
C2	C1	HC1	O5	239.3	239.6
HC1	C1	C2	N2	299.7	301.3
HC1	C1	C2	C3	179.1	181.3
HC1	C1	C2	HC2	60.3	61.3
HC1	C1	O5	C5	185.6	172.3
N2	C2	C1	O5	180.9	181.1
N2	C2	C1	HC1	299.7	301.3
C1	C2	N2	C3	240.7	240.3
C1	C2	N2	HC2	121.9	120.1
C3	C2	N2	HC2	241.2	239.8
N2	C2	C3	O3	65.1	66.5
N2	C2	C3	C4	181.9	186.4
N2	C2	C3	HC3	303.7	306.1
C7	N2	C2	HN2	180.0	180.0
C2	N2	C7	C8	181.8	180.0
C2	N2	C7	O7	1.9	360.0
C3	C2	C1	O5	60.3	61.1
C3	C2	C1	HC1	179.1	181.3
C1	C2	C3	N2	117.5	120.0
C1	C2	C3	HC2	238.1	240.1
N2	C2	C3	HC2	120.6	120.1
C3	C2	N2	C7	250.7	209.9
C3	C2	N2	HN2	70.6	29.9
O3	C3	C2	C4	243.2	240.1
O3	C3	C2	HC3	121.4	120.4
C2	C3	O3	HO3	179.9	180.0
C4	C3	C2	HC3	238.2	240.3
C2	C3	C4	O4	298.0	293.7
C2	C3	C4	C5	56.3	53.7
C2	C3	C4	HC4	176.0	173.5
HC2	C2	C1	O5	301.5	301.1
HC2	C2	C1	HC1	60.3	61.3
C1	C2	HC2	N2	241.6	239.9
C1	C2	HC2	C3	120.2	119.7
N2	C2	HC2	C3	238.6	239.8
HC2	C2	N2	C7	9.5	330.0
HC2	C2	N2	HN2	189.4	150.0
HC2	C2	C3	O3	304.5	306.4
HC2	C2	C3	C4	61.3	66.3
HC2	C2	C3	HC3	183.1	186.0
C7	N2	C2	C3	250.7	209.9
C7	N2	C2	HC2	9.5	330.0
C2	N2	C7	HN2	180.0	180.0
C8	C7	N2	O7	179.9	180.1
N2	C7	C8	HC81	180.0	180.0
N2	C7	C8	HC82	305.2	299.9
N2	C7	C8	HC83	54.7	60.0
HN2	N2	C2	C3	70.6	29.9
HN2	N2	C2	HC2	189.4	150.0
C2	N2	HN2	C7	180.0	180.0
HN2	N2	C7	C8	1.9	0.0
HN2	N2	C7	O7	181.9	180.0
C8	C7	N2	HN2	1.9	0.0
N2	C7	C8	O7	180.1	179.9
HC81	C8	C7	HC82	234.8	240.1
HC81	C8	C7	HC83	125.3	120.0
HC82	C8	C7	HC83	250.5	239.9
O7	C7	N2	HN2	181.9	180.0
N2	C7	O7	C8	179.9	180.1
O7	C7	C8	HC81	360.0	0.0
O7	C7	C8	HC82	125.2	119.9
O7	C7	C8	HC83	234.7	240.1
HC81	C8	C7	O7	360.0	0.0
C7	C8	HC81	HC82	125.2	119.9
C7	C8	HC81	HC83	234.7	240.0
HC82	C8	HC81	HC83	109.5	120.1
HC82	C8	C7	O7	125.2	119.9
C7	C8	HC82	HC81	230.9	240.1
C7	C8	HC82	HC83	115.4	120.1
HC81	C8	HC82	HC83	244.5	240.0
HC83	C8	C7	O7	234.7	240.1
C7	C8	HC83	HC81	129.2	120.0
C7	C8	HC83	HC82	244.6	240.0
HC81	C8	HC83	HC82	115.4	120.0
O3	C3	C2	HC2	304.5	306.4
C2	C3	O3	C4	116.2	119.3
C2	C3	O3	HC3	238.0	239.7
C4	C3	O3	HC3	121.8	120.4
O3	C3	C4	O4	54.6	53.6
O3	C3	C4	C5	173.0	173.6
O3	C3	C4	HC4	292.7	293.4
C4	C3	C2	HC2	61.3	66.3
C2	C3	C4	O3	243.3	240.1
C2	C3	C4	HC3	121.9	119.7
O3	C3	C4	HC3	238.6	239.5
C4	C3	O3	HO3	63.7	60.7
O4	C4	C3	C5	241.7	240.0
O4	C4	C3	HC4	121.9	120.2
C3	C4	O4	HO4	180.0	180.0
C5	C4	C3	HC4	240.3	240.2
C3	C4	C5	O5	308.3	298.8
C3	C4	C5	C6	188.7	178.7
C3	C4	C5	HC5	67.1	58.8
HC3	C3	C2	HC2	183.1	186.0
C2	C3	HC3	O3	120.1	120.3
C2	C3	HC3	C4	240.3	240.9
O3	C3	HC3	C4	120.2	120.5
HC3	C3	O3	HO3	301.9	300.3
HC3	C3	C4	O4	176.0	174.0
HC3	C3	C4	C5	294.4	294.0
HC3	C3	C4	HC4	54.1	53.9
HO3	O3	C3	C4	63.7	60.7
HO3	O3	C3	HC3	301.9	300.3
O4	C4	C3	HC3	176.0	174.0
C3	C4	O4	C5	119.8	119.6
C3	C4	O4	HC4	239.4	239.8
C5	C4	O4	HC4	119.7	120.2
O4	C4	C5	O5	65.7	58.7
O4	C4	C5	C6	306.1	298.6
O4	C4	C5	HC5	184.4	178.7
C1	O5	C5	C4	50.9	67.5
C5	C4	C3	HC3	294.4	294.0
C3	C4	C5	O4	242.6	240.1
C3	C4	C5	HC4	120.7	119.9
O4	C4	C5	HC4	238.0	239.8
C5	C4	O4	HO4	60.3	60.4
O5	C5	C4	C6	119.6	120.1
O5	C5	C4	HC5	241.3	240.0
C6	C5	C4	HC5	121.6	119.9
C4	C5	C6	O6	203.7	180.0
C4	C5	C6	HC61	328.9	299.9
C4	C5	C6	HC62	78.4	60.0
HC4	C4	C3	HC3	54.1	53.9
C3	C4	HC4	O4	118.9	120.2
C3	C4	HC4	C5	238.7	240.5
O4	C4	HC4	C5	119.8	120.3
HC4	C4	O4	HO4	300.6	300.2
HC4	C4	C5	O5	187.7	178.9
HC4	C4	C5	C6	68.0	58.9
HC4	C4	C5	HC5	306.4	299.0
HO4	O4	C4	C5	60.3	60.4
HO4	O4	C4	HC4	300.6	300.2
C5	O5	C1	HC1	185.6	172.3
O5	C5	C4	HC4	187.7	178.9
C4	C5	O5	C6	239.8	240.0
C4	C5	O5	HC5	118.2	120.0
C6	C5	O5	HC5	238.3	240.0
O5	C5	C6	O6	80.7	59.7
O5	C5	C6	HC61	206.0	179.7
O5	C5	C6	HC62	315.4	299.7
C6	C5	C4	HC4	68.0	58.9
C4	C5	C6	O5	123.0	120.3
C4	C5	C6	HC5	241.8	240.2
O5	C5	C6	HC5	118.8	119.9
O6	C6	C5	HC61	234.7	240.1
O6	C6	C5	HC62	125.3	120.0
C5	C6	O6	HO6	180.0	180.0
HC61	C6	C5	HC62	250.5	239.9
HC5	C5	C4	HC4	306.4	299.0
C4	C5	HC5	O5	237.9	239.7
C4	C5	HC5	C6	119.2	119.8
O5	C5	HC5	C6	241.3	240.1
HC5	C5	C6	O6	321.9	299.8
HC5	C5	C6	HC61	87.1	59.7
HC5	C5	C6	HC62	196.6	179.8
O6	C6	C5	HC5	321.9	299.8
C5	C6	O6	HC61	125.3	120.0
C5	C6	O6	HC62	234.7	239.9
HC61	C6	O6	HC62	109.4	119.9
HC61	C6	C5	HC5	87.1	59.7
C5	C6	HC61	O6	237.1	240.0
C5	C6	HC61	HC62	118.6	120.1
O6	C6	HC61	HC62	241.5	240.1
HC61	C6	O6	HO6	54.7	60.0
HC62	C6	C5	HC5	196.6	179.8
C5	C6	HC62	O6	122.9	120.0
C5	C6	HC62	HC61	241.4	239.9
O6	C6	HC62	HC61	118.5	119.9
HC62	C6	O6	HO6	305.3	300.0
HO6	O6	C6	HC61	54.7	60.0
HO6	O6	C6	HC62	305.3	300.0