PDB Chemical Component TNL
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for TNL
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C7 |
1.499 |
1.506 |
C1 |
C2 |
1.417 |
1.402 |
C1 |
C6 |
1.374 |
1.403 |
C7 |
H7C1 |
1.115 |
1.089 |
C7 |
H7C2 |
1.115 |
1.090 |
C7 |
H7C3 |
1.115 |
1.089 |
C2 |
N2 |
1.463 |
1.346 |
C2 |
C3 |
1.359 |
1.402 |
N2 |
O21 |
1.249 |
1.219 |
N2 |
O22 |
1.192 |
1.217 |
C3 |
C4 |
1.368 |
1.403 |
C3 |
H3 |
1.103 |
1.080 |
C4 |
N4 |
1.448 |
1.345 |
C4 |
C5 |
1.366 |
1.403 |
N4 |
O41 |
1.225 |
1.218 |
N4 |
O42 |
1.211 |
1.217 |
C5 |
C6 |
1.383 |
1.402 |
C5 |
H5 |
1.103 |
1.079 |
C6 |
N6 |
1.477 |
1.346 |
N6 |
O61 |
1.209 |
1.218 |
N6 |
O62 |
1.218 |
1.217 |
Bond Angles for TNL
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C7 |
C1 |
C2 |
119.8 |
120.0 |
C7 |
C1 |
C6 |
125.4 |
120.0 |
C1 |
C7 |
H7C1 |
119.8 |
109.5 |
C1 |
C7 |
H7C2 |
108.5 |
109.5 |
C1 |
C7 |
H7C3 |
108.5 |
109.5 |
C2 |
C1 |
C6 |
114.8 |
120.0 |
C1 |
C2 |
N2 |
118.7 |
120.0 |
C1 |
C2 |
C3 |
125.0 |
120.0 |
C1 |
C6 |
C5 |
123.2 |
120.0 |
C1 |
C6 |
N6 |
120.9 |
120.0 |
H7C1 |
C7 |
H7C2 |
108.5 |
109.5 |
H7C1 |
C7 |
H7C3 |
108.5 |
109.5 |
H7C2 |
C7 |
H7C3 |
101.5 |
109.4 |
N2 |
C2 |
C3 |
116.3 |
120.0 |
C2 |
N2 |
O21 |
119.9 |
120.0 |
C2 |
N2 |
O22 |
119.0 |
120.0 |
C2 |
C3 |
C4 |
115.2 |
120.0 |
C2 |
C3 |
H3 |
122.4 |
120.0 |
O21 |
N2 |
O22 |
121.1 |
120.0 |
C4 |
C3 |
H3 |
122.4 |
120.0 |
C3 |
C4 |
N4 |
116.1 |
120.0 |
C3 |
C4 |
C5 |
124.8 |
120.0 |
N4 |
C4 |
C5 |
119.1 |
120.0 |
C4 |
N4 |
O41 |
115.5 |
120.0 |
C4 |
N4 |
O42 |
118.9 |
120.0 |
C4 |
C5 |
C6 |
116.9 |
120.0 |
C4 |
C5 |
H5 |
121.5 |
120.0 |
O41 |
N4 |
O42 |
125.4 |
119.9 |
C6 |
C5 |
H5 |
121.5 |
120.0 |
C5 |
C6 |
N6 |
115.9 |
120.0 |
C6 |
N6 |
O61 |
118.0 |
120.0 |
C6 |
N6 |
O62 |
118.7 |
120.0 |
O61 |
N6 |
O62 |
123.3 |
120.0 |
Torsion Angles for TNL
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C7 |
C6 |
178.6 |
180.2 |
C7 |
C1 |
C2 |
N2 |
3.1 |
360.0 |
C7 |
C1 |
C2 |
C3 |
181.9 |
179.9 |
C7 |
C1 |
C6 |
C5 |
180.2 |
179.8 |
C7 |
C1 |
C6 |
N6 |
0.6 |
0.3 |
H7C1 |
C7 |
C1 |
H7C2 |
125.3 |
240.0 |
H7C1 |
C7 |
C1 |
H7C3 |
234.7 |
120.0 |
H7C2 |
C7 |
C1 |
H7C3 |
109.5 |
240.0 |
C7 |
C1 |
C2 |
C6 |
181.2 |
179.8 |
C2 |
C1 |
C7 |
H7C1 |
180.0 |
89.7 |
C2 |
C1 |
C7 |
H7C2 |
54.8 |
209.8 |
C2 |
C1 |
C7 |
H7C3 |
305.3 |
329.7 |
C2 |
C1 |
C6 |
C5 |
1.6 |
359.5 |
C2 |
C1 |
C6 |
N6 |
181.9 |
180.0 |
N2 |
C2 |
C1 |
C3 |
181.3 |
180.0 |
C1 |
C2 |
N2 |
O21 |
234.7 |
149.0 |
C1 |
C2 |
N2 |
O22 |
53.4 |
329.0 |
C1 |
C2 |
C3 |
C4 |
357.9 |
0.0 |
C1 |
C2 |
C3 |
H3 |
177.9 |
180.0 |
C7 |
C1 |
C6 |
C2 |
178.7 |
180.2 |
C6 |
C1 |
C7 |
H7C1 |
1.4 |
269.5 |
C6 |
C1 |
C7 |
H7C2 |
236.1 |
29.5 |
C6 |
C1 |
C7 |
H7C3 |
126.7 |
149.5 |
C6 |
C1 |
C2 |
N2 |
181.9 |
180.2 |
C6 |
C1 |
C2 |
C3 |
0.6 |
0.2 |
C4 |
C5 |
C6 |
C1 |
358.0 |
0.5 |
C1 |
C6 |
C5 |
H5 |
177.9 |
180.3 |
C5 |
C6 |
C1 |
N6 |
179.7 |
179.5 |
C1 |
C6 |
N6 |
O61 |
132.1 |
211.0 |
C1 |
C6 |
N6 |
O62 |
312.7 |
30.9 |
H7C1 |
C7 |
C1 |
C2 |
180.0 |
89.7 |
H7C1 |
C7 |
C1 |
C6 |
1.4 |
269.5 |
C1 |
C7 |
H7C1 |
H7C2 |
234.8 |
120.0 |
C1 |
C7 |
H7C1 |
H7C3 |
125.2 |
240.0 |
H7C2 |
C7 |
H7C1 |
H7C3 |
250.5 |
119.9 |
H7C2 |
C7 |
C1 |
C2 |
54.8 |
209.8 |
H7C2 |
C7 |
C1 |
C6 |
236.1 |
29.5 |
C1 |
C7 |
H7C2 |
H7C1 |
131.6 |
240.0 |
C1 |
C7 |
H7C2 |
H7C3 |
245.8 |
120.0 |
H7C1 |
C7 |
H7C2 |
H7C3 |
114.2 |
240.1 |
H7C3 |
C7 |
C1 |
C2 |
305.3 |
329.7 |
H7C3 |
C7 |
C1 |
C6 |
126.7 |
149.5 |
C1 |
C7 |
H7C3 |
H7C1 |
228.4 |
120.0 |
C1 |
C7 |
H7C3 |
H7C2 |
114.2 |
240.0 |
H7C1 |
C7 |
H7C3 |
H7C2 |
245.8 |
119.9 |
N2 |
C2 |
C1 |
C6 |
181.9 |
180.2 |
C1 |
C2 |
N2 |
C3 |
178.9 |
180.0 |
N2 |
C2 |
C3 |
C4 |
176.7 |
180.0 |
N2 |
C2 |
C3 |
H3 |
356.6 |
360.0 |
O21 |
N2 |
C2 |
O22 |
181.4 |
180.1 |
C3 |
C2 |
C1 |
C6 |
0.6 |
0.2 |
C1 |
C2 |
C3 |
N2 |
181.2 |
180.0 |
C3 |
C2 |
N2 |
O21 |
55.9 |
329.0 |
C3 |
C2 |
N2 |
O22 |
234.5 |
149.0 |
C4 |
C3 |
C2 |
H3 |
180.0 |
180.1 |
C2 |
C3 |
C4 |
N4 |
181.8 |
179.9 |
C2 |
C3 |
C4 |
C5 |
1.6 |
0.0 |
O21 |
N2 |
C2 |
C3 |
55.9 |
329.0 |
C2 |
N2 |
O21 |
O22 |
178.6 |
179.9 |
O22 |
N2 |
C2 |
C3 |
234.5 |
149.0 |
C2 |
N2 |
O22 |
O21 |
181.4 |
180.1 |
C2 |
C3 |
C4 |
H3 |
180.0 |
179.9 |
N4 |
C4 |
C3 |
C5 |
180.2 |
179.9 |
C3 |
C4 |
N4 |
O41 |
159.3 |
180.0 |
C3 |
C4 |
N4 |
O42 |
336.4 |
0.0 |
C3 |
C4 |
C5 |
C6 |
0.3 |
359.7 |
C3 |
C4 |
C5 |
H5 |
180.4 |
180.0 |
C2 |
C3 |
H3 |
C4 |
180.0 |
180.1 |
H3 |
C3 |
C4 |
N4 |
1.8 |
360.0 |
H3 |
C3 |
C4 |
C5 |
181.6 |
180.1 |
N4 |
C4 |
C3 |
H3 |
1.8 |
360.0 |
C3 |
C4 |
N4 |
C5 |
179.8 |
180.1 |
N4 |
C4 |
C5 |
C6 |
180.1 |
179.8 |
N4 |
C4 |
C5 |
H5 |
0.2 |
0.0 |
O41 |
N4 |
C4 |
O42 |
182.9 |
180.0 |
C1 |
C6 |
C5 |
C4 |
358.0 |
0.5 |
C5 |
C4 |
C3 |
H3 |
181.6 |
180.1 |
C3 |
C4 |
C5 |
N4 |
180.2 |
179.9 |
C5 |
C4 |
N4 |
O41 |
339.5 |
360.0 |
C5 |
C4 |
N4 |
O42 |
156.5 |
179.9 |
C6 |
C5 |
C4 |
H5 |
180.0 |
179.8 |
C4 |
C5 |
C6 |
N6 |
177.6 |
180.0 |
O41 |
N4 |
C4 |
C5 |
339.5 |
360.0 |
C4 |
N4 |
O41 |
O42 |
176.9 |
180.0 |
O42 |
N4 |
C4 |
C5 |
156.5 |
179.9 |
C4 |
N4 |
O42 |
O41 |
183.2 |
180.0 |
C1 |
C6 |
C5 |
N6 |
180.3 |
180.5 |
C4 |
C5 |
C6 |
H5 |
180.0 |
180.2 |
C5 |
C6 |
N6 |
O61 |
312.4 |
31.5 |
C5 |
C6 |
N6 |
O62 |
133.0 |
211.4 |
C4 |
C5 |
H5 |
C6 |
180.0 |
179.8 |
H5 |
C5 |
C6 |
N6 |
357.6 |
359.8 |
C1 |
C6 |
N6 |
C5 |
179.7 |
179.5 |
N6 |
C6 |
C5 |
H5 |
357.6 |
359.8 |
O61 |
N6 |
C6 |
O62 |
179.4 |
180.1 |
C6 |
N6 |
O61 |
O62 |
180.6 |
179.9 |
C6 |
N6 |
O62 |
O61 |
179.4 |
180.1 |