PDB Chemical Component TN6

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for TN6

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C4 C3 1.632 1.530
C3 N 1.483 1.469
N P 1.529 1.683
N C1 1.439 1.469
P O2 1.542 1.610
P OD 1.468 1.479
P OXT 1.683 1.610
C1 C2 1.551 1.531
C4 H41C 1.100 1.090
C4 H42C 1.100 1.090
C4 H43C 1.100 1.090
C3 H31C 1.100 1.090
C3 H32C 1.100 1.091
C1 H11C 1.100 1.089
C1 H12C 1.100 1.090
O2 H2 0.950 0.967
OXT HXT 0.950 0.967
C2 H21C 1.100 1.089
C2 H22C 1.101 1.090
C2 H23C 1.100 1.090

Bond Angles for TN6

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C4 C3 N 106.6 109.5
C3 C4 H41C 109.5 109.5
C3 C4 H42C 109.4 109.5
C3 C4 H43C 109.4 109.5
C4 C3 H31C 110.4 109.4
C4 C3 H32C 111.0 109.5
C3 N P 114.1 111.0
C3 N C1 117.1 111.0
N C3 H31C 110.4 109.5
N C3 H32C 111.1 109.5
P N C1 116.0 111.0
N P O2 100.5 109.5
N P OD 113.1 109.5
N P OXT 113.5 109.5
N C1 C2 104.9 109.5
N C1 H11C 111.0 109.5
N C1 H12C 112.0 109.5
O2 P OD 115.7 109.5
O2 P OXT 99.2 109.5
P O2 H2 109.5 114.0
OD P OXT 113.4 109.5
P OXT HXT 109.5 114.0
C2 C1 H11C 111.0 109.5
C2 C1 H12C 112.0 109.4
C1 C2 H21C 109.5 109.5
C1 C2 H22C 109.4 109.5
C1 C2 H23C 109.5 109.4
H41C C4 H42C 109.5 109.5
H41C C4 H43C 109.5 109.5
H42C C4 H43C 109.5 109.5
H31C C3 H32C 107.3 109.5
H11C C1 H12C 106.0 109.5
H21C C2 H22C 109.4 109.5
H21C C2 H23C 109.4 109.5
H22C C2 H23C 109.5 109.5

Torsion Angles for TN6

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C4 C3 N P 112.0 145.0
C4 C3 N C1 252.2 268.9
N C3 C4 H31C 240.0 240.0
N C3 C4 H32C 121.1 120.0
H41C C4 C3 H42C 240.0 240.0
H41C C4 C3 H43C 120.0 120.0
H42C C4 C3 H43C 240.0 240.0
H31C C3 C4 H32C 241.1 240.0
N C3 C4 H41C 333.7 60.0
N C3 C4 H42C 93.8 180.0
N C3 C4 H43C 213.8 300.0
C4 C3 N H31C 120.0 120.0
C4 C3 N H32C 238.9 240.0
P N C3 C1 219.8 236.0
C3 N P O2 342.9 64.0
C3 N P OD 219.0 183.9
C3 N P OXT 87.9 304.0
C3 N C1 C2 83.8 96.0
C3 N C1 H11C 203.9 216.0
C3 N C1 H12C 322.1 336.1
H31C C3 N H32C 118.9 120.0
C3 N P C1 140.6 124.0
P N C3 H31C 352.0 25.0
P N C3 H32C 233.1 265.0
P N C1 C2 223.3 220.0
P N C1 H11C 343.3 340.0
P N C1 H12C 101.6 100.0
O2 P N OD 124.0 240.0
O2 P N OXT 255.0 120.0
N P O2 H2 58.3 300.0
OD P N OXT 131.0 240.0
N P OXT HXT 319.4 179.9
C3 N C1 P 220.5 236.0
C1 N C3 H31C 132.2 149.0
C1 N C3 H32C 13.3 28.9
C1 N P O2 202.3 300.0
C1 N P OD 78.3 60.0
C1 N P OXT 307.3 180.0
C2 C1 N H11C 240.0 240.0
C2 C1 N H12C 121.7 119.9
N C1 C2 H21C 86.5 300.0
N C1 C2 H22C 206.5 60.0
N C1 C2 H23C 326.5 180.0
H11C C1 N H12C 241.7 240.0
O2 P N C1 202.3 300.0
N P O2 OD 237.9 120.0
N P O2 OXT 116.2 240.0
OD P O2 OXT 238.3 120.0
O2 P OXT HXT 65.2 59.9
OD P N C1 78.3 60.0
N P OD O2 115.2 240.0
N P OD OXT 228.9 120.0
O2 P OD OXT 113.8 240.0
OD P O2 H2 180.4 180.0
OD P OXT HXT 188.6 300.0
OXT P N C1 307.3 180.0
N P OXT O2 254.2 120.0
N P OXT OD 130.9 240.0
O2 P OXT OD 236.7 120.0
OXT P O2 H2 302.1 60.0
N C1 C2 H11C 120.0 120.0
N C1 C2 H12C 238.3 240.0
H11C C1 C2 H12C 118.3 120.0
H21C C2 C1 H22C 240.0 240.0
H21C C2 C1 H23C 120.0 120.0
H22C C2 C1 H23C 240.0 240.0
H41C C4 C3 N 333.7 60.0
C3 C4 H41C H42C 120.0 120.0
C3 C4 H41C H43C 240.0 240.0
H41C C4 C3 H31C 93.7 180.0
H41C C4 C3 H32C 212.6 300.0
H42C C4 H41C H43C 120.1 120.0
H42C C4 C3 N 93.8 180.0
C3 C4 H42C H41C 240.0 240.0
C3 C4 H42C H43C 120.0 120.0
H42C C4 C3 H31C 213.8 300.0
H42C C4 C3 H32C 332.6 60.0
H41C C4 H42C H43C 240.0 240.0
H43C C4 C3 N 213.8 300.0
C3 C4 H43C H41C 120.0 120.0
C3 C4 H43C H42C 240.0 240.0
H43C C4 C3 H31C 333.8 60.0
H43C C4 C3 H32C 92.7 180.0
H41C C4 H43C H42C 120.1 120.0
C4 C3 H31C N 242.3 240.0
H31C C3 C4 H41C 93.7 180.0
H31C C3 C4 H42C 213.8 300.0
H31C C3 C4 H43C 333.8 60.0
C4 C3 H31C H32C 121.1 120.0
H31C C3 N P 352.0 25.0
H31C C3 N C1 132.2 149.0
N C3 H31C H32C 238.8 240.0
C4 C3 H32C N 118.5 120.0
H32C C3 C4 H41C 212.6 300.0
H32C C3 C4 H42C 332.6 60.0
H32C C3 C4 H43C 92.7 180.0
C4 C3 H32C H31C 239.2 240.1
H32C C3 N P 233.1 265.0
H32C C3 N C1 13.3 28.9
N C3 H32C H31C 120.8 120.0
N C1 H11C C2 243.7 240.0
N C1 H11C H12C 121.8 120.0
C2 C1 H11C H12C 238.2 240.0
H11C C1 C2 H21C 326.5 180.0
H11C C1 C2 H22C 86.5 300.0
H11C C1 C2 H23C 206.5 60.0
N C1 H12C C2 117.6 120.0
N C1 H12C H11C 238.8 240.0
C2 C1 H12C H11C 121.2 120.0
H12C C1 C2 H21C 208.3 60.0
H12C C1 C2 H22C 328.2 180.0
H12C C1 C2 H23C 88.3 299.9
H2 O2 P OD 180.4 180.0
H2 O2 P OXT 302.1 60.0
H21C C2 C1 H11C 326.5 180.0
H21C C2 C1 H12C 208.3 60.0
C1 C2 H21C H22C 120.0 120.0
C1 C2 H21C H23C 240.0 240.0
H22C C2 H21C H23C 120.0 120.0
H22C C2 C1 H11C 86.5 300.0
H22C C2 C1 H12C 328.2 180.0
C1 C2 H22C H21C 240.0 240.0
C1 C2 H22C H23C 120.0 119.9
H21C C2 H22C H23C 240.0 240.0
H23C C2 C1 H11C 206.5 60.0
H23C C2 C1 H12C 88.3 299.9
C1 C2 H23C H21C 120.0 120.0
C1 C2 H23C H22C 240.0 240.0
H21C C2 H23C H22C 120.0 120.0