PDB Chemical Component TMU
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for TMU
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C1 |
S2 |
1.739 |
1.737 |
| C1 |
N3 |
1.317 |
1.319 |
| C1 |
N4 |
1.384 |
1.390 |
| S2 |
C5 |
1.775 |
1.786 |
| N3 |
C6 |
1.310 |
1.319 |
| N4 |
C7 |
1.359 |
1.348 |
| N4 |
HN4 |
1.020 |
0.970 |
| C5 |
C6 |
1.358 |
1.355 |
| C5 |
N8 |
1.467 |
1.481 |
| C6 |
H6 |
1.103 |
1.080 |
| C7 |
N9 |
1.360 |
1.348 |
| C7 |
O10 |
1.234 |
1.216 |
| N8 |
O11 |
1.224 |
1.218 |
| N8 |
O12 |
1.217 |
1.217 |
| N9 |
C13 |
1.473 |
1.465 |
| N9 |
HN9 |
1.020 |
0.970 |
| C13 |
C14 |
1.505 |
1.506 |
| C13 |
H131 |
1.116 |
1.091 |
| C13 |
H132 |
1.115 |
1.090 |
| C14 |
C15 |
1.418 |
1.383 |
| C14 |
C16 |
1.410 |
1.383 |
| C15 |
C17 |
1.408 |
1.382 |
| C15 |
H15 |
1.103 |
1.080 |
| C16 |
C18 |
1.406 |
1.382 |
| C16 |
H16 |
1.103 |
1.080 |
| C17 |
C19 |
1.422 |
1.387 |
| C17 |
H17 |
1.103 |
1.080 |
| C18 |
C19 |
1.425 |
1.387 |
| C18 |
H18 |
1.103 |
1.080 |
| C19 |
O20 |
1.372 |
1.359 |
| O20 |
C21 |
1.439 |
1.428 |
| C21 |
H211 |
1.116 |
1.090 |
| C21 |
H212 |
1.115 |
1.090 |
| C21 |
H213 |
1.115 |
1.091 |
Bond Angles for TMU
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| S2 |
C1 |
N3 |
102.7 |
102.1 |
| S2 |
C1 |
N4 |
129.1 |
128.9 |
| C1 |
S2 |
C5 |
96.9 |
97.5 |
| N3 |
C1 |
N4 |
128.1 |
129.0 |
| C1 |
N3 |
C6 |
120.7 |
121.2 |
| C1 |
N4 |
C7 |
123.0 |
120.0 |
| C1 |
N4 |
HN4 |
107.4 |
120.0 |
| S2 |
C5 |
C6 |
101.2 |
100.7 |
| S2 |
C5 |
N8 |
128.4 |
129.6 |
| N3 |
C6 |
C5 |
118.5 |
118.5 |
| N3 |
C6 |
H6 |
119.1 |
120.7 |
| C7 |
N4 |
HN4 |
107.4 |
120.0 |
| N4 |
C7 |
N9 |
117.6 |
120.0 |
| N4 |
C7 |
O10 |
121.3 |
120.0 |
| C6 |
C5 |
N8 |
130.4 |
129.6 |
| C5 |
C6 |
H6 |
122.5 |
120.8 |
| C5 |
N8 |
O11 |
120.2 |
120.0 |
| C5 |
N8 |
O12 |
119.5 |
120.1 |
| N9 |
C7 |
O10 |
121.1 |
120.0 |
| C7 |
N9 |
C13 |
122.4 |
120.0 |
| C7 |
N9 |
HN9 |
114.6 |
120.0 |
| O11 |
N8 |
O12 |
120.3 |
120.0 |
| C13 |
N9 |
HN9 |
123.0 |
120.0 |
| N9 |
C13 |
C14 |
109.6 |
109.5 |
| N9 |
C13 |
H131 |
112.2 |
109.4 |
| N9 |
C13 |
H132 |
112.2 |
109.5 |
| C14 |
C13 |
H131 |
112.2 |
109.5 |
| C14 |
C13 |
H132 |
112.1 |
109.5 |
| C13 |
C14 |
C15 |
120.3 |
119.9 |
| C13 |
C14 |
C16 |
119.5 |
120.0 |
| H131 |
C13 |
H132 |
98.3 |
109.4 |
| C15 |
C14 |
C16 |
120.2 |
120.1 |
| C14 |
C15 |
C17 |
120.0 |
120.1 |
| C14 |
C15 |
H15 |
120.3 |
120.0 |
| C14 |
C16 |
C18 |
120.0 |
120.0 |
| C14 |
C16 |
H16 |
120.1 |
120.0 |
| C17 |
C15 |
H15 |
119.7 |
119.9 |
| C15 |
C17 |
C19 |
119.9 |
119.9 |
| C15 |
C17 |
H17 |
119.5 |
120.1 |
| C18 |
C16 |
H16 |
119.8 |
120.0 |
| C16 |
C18 |
C19 |
120.2 |
120.0 |
| C16 |
C18 |
H18 |
119.3 |
120.0 |
| C19 |
C17 |
H17 |
120.5 |
120.0 |
| C17 |
C19 |
C18 |
119.6 |
119.9 |
| C17 |
C19 |
O20 |
120.1 |
120.1 |
| C19 |
C18 |
H18 |
120.6 |
120.0 |
| C18 |
C19 |
O20 |
120.3 |
120.0 |
| C19 |
O20 |
C21 |
108.7 |
106.8 |
| O20 |
C21 |
H211 |
112.5 |
109.5 |
| O20 |
C21 |
H212 |
108.7 |
109.5 |
| O20 |
C21 |
H213 |
112.5 |
109.5 |
| H211 |
C21 |
H212 |
112.5 |
109.5 |
| H211 |
C21 |
H213 |
97.9 |
109.4 |
| H212 |
C21 |
H213 |
112.5 |
109.5 |
Torsion Angles for TMU
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N3 |
C1 |
S2 |
N4 |
180.6 |
180.3 |
| S2 |
C1 |
N3 |
C6 |
0.2 |
359.5 |
| S2 |
C1 |
N4 |
C7 |
354.8 |
180.0 |
| S2 |
C1 |
N4 |
HN4 |
229.5 |
0.1 |
| C1 |
S2 |
C5 |
C6 |
0.4 |
0.0 |
| C1 |
S2 |
C5 |
N8 |
180.6 |
180.0 |
| S2 |
C1 |
N3 |
N4 |
179.4 |
179.7 |
| N3 |
C1 |
S2 |
C5 |
359.7 |
0.2 |
| N3 |
C1 |
N4 |
C7 |
174.0 |
359.6 |
| N3 |
C1 |
N4 |
HN4 |
48.8 |
179.7 |
| C1 |
N3 |
C6 |
C5 |
0.1 |
0.5 |
| C1 |
N3 |
C6 |
H6 |
180.1 |
180.3 |
| S2 |
C1 |
N4 |
N3 |
180.8 |
180.3 |
| N4 |
C1 |
S2 |
C5 |
179.1 |
180.0 |
| N4 |
C1 |
N3 |
C6 |
180.8 |
179.8 |
| C7 |
N4 |
C1 |
HN4 |
125.3 |
179.9 |
| C1 |
N4 |
C7 |
N9 |
181.1 |
180.0 |
| C1 |
N4 |
C7 |
O10 |
0.7 |
0.0 |
| C5 |
S2 |
C1 |
N3 |
359.7 |
0.2 |
| C5 |
S2 |
C1 |
N4 |
179.1 |
180.0 |
| N3 |
C6 |
C5 |
S2 |
359.7 |
359.7 |
| C6 |
C5 |
S2 |
N8 |
179.8 |
180.0 |
| S2 |
C5 |
C6 |
H6 |
179.7 |
180.0 |
| S2 |
C5 |
N8 |
O11 |
156.4 |
180.1 |
| S2 |
C5 |
N8 |
O12 |
337.4 |
360.0 |
| C6 |
N3 |
C1 |
N4 |
180.8 |
179.8 |
| S2 |
C5 |
C6 |
N3 |
359.7 |
359.7 |
| N3 |
C6 |
C5 |
N8 |
179.5 |
179.7 |
| C5 |
C6 |
N3 |
H6 |
180.0 |
180.3 |
| C1 |
N4 |
C7 |
HN4 |
234.7 |
180.1 |
| N9 |
C7 |
N4 |
O10 |
180.3 |
180.0 |
| N4 |
C7 |
N9 |
C13 |
179.8 |
180.0 |
| N4 |
C7 |
N9 |
HN9 |
359.8 |
360.0 |
| C1 |
N4 |
HN4 |
C7 |
134.1 |
179.9 |
| HN4 |
N4 |
C7 |
N9 |
306.3 |
359.9 |
| HN4 |
N4 |
C7 |
O10 |
126.0 |
180.0 |
| S2 |
C5 |
C6 |
N8 |
180.2 |
180.0 |
| N3 |
C6 |
C5 |
H6 |
180.0 |
179.7 |
| C6 |
C5 |
N8 |
O11 |
336.7 |
0.1 |
| C6 |
C5 |
N8 |
O12 |
157.6 |
180.0 |
| S2 |
C5 |
N8 |
C6 |
179.7 |
180.0 |
| N8 |
C5 |
C6 |
H6 |
359.5 |
360.0 |
| O11 |
N8 |
C5 |
O12 |
179.1 |
180.1 |
| N3 |
C6 |
H6 |
C5 |
180.0 |
180.3 |
| H6 |
C6 |
C5 |
N8 |
359.5 |
360.0 |
| N9 |
C7 |
N4 |
HN4 |
306.3 |
359.9 |
| N4 |
C7 |
N9 |
O10 |
179.7 |
180.0 |
| C13 |
N9 |
C7 |
HN9 |
180.0 |
180.0 |
| C7 |
N9 |
C13 |
C14 |
91.7 |
180.0 |
| C7 |
N9 |
C13 |
H131 |
326.5 |
60.0 |
| C7 |
N9 |
C13 |
H132 |
217.0 |
300.0 |
| O10 |
C7 |
N4 |
HN4 |
126.0 |
180.0 |
| N4 |
C7 |
O10 |
N9 |
180.4 |
180.0 |
| O10 |
C7 |
N9 |
C13 |
0.2 |
360.0 |
| O10 |
C7 |
N9 |
HN9 |
180.1 |
180.0 |
| C5 |
N8 |
O11 |
O12 |
181.0 |
179.9 |
| C5 |
N8 |
O12 |
O11 |
179.0 |
180.1 |
| C13 |
N9 |
C7 |
O10 |
0.2 |
360.0 |
| C7 |
N9 |
C13 |
HN9 |
180.0 |
180.0 |
| C14 |
C13 |
N9 |
H131 |
125.3 |
120.0 |
| C14 |
C13 |
N9 |
H132 |
234.8 |
239.9 |
| N9 |
C13 |
C14 |
C15 |
39.0 |
90.0 |
| N9 |
C13 |
C14 |
C16 |
219.1 |
270.1 |
| H131 |
C13 |
N9 |
H132 |
109.5 |
119.9 |
| HN9 |
N9 |
C7 |
O10 |
180.1 |
180.0 |
| C7 |
N9 |
HN9 |
C13 |
180.0 |
180.0 |
| HN9 |
N9 |
C13 |
C14 |
271.8 |
360.0 |
| HN9 |
N9 |
C13 |
H131 |
146.5 |
240.0 |
| HN9 |
N9 |
C13 |
H132 |
37.0 |
120.0 |
| C14 |
C13 |
N9 |
HN9 |
271.8 |
360.0 |
| N9 |
C13 |
C14 |
H131 |
234.7 |
240.0 |
| N9 |
C13 |
C14 |
H132 |
125.3 |
120.1 |
| H131 |
C13 |
C14 |
H132 |
250.5 |
240.0 |
| C15 |
C14 |
C13 |
C16 |
179.9 |
180.0 |
| C13 |
C14 |
C15 |
C17 |
180.2 |
180.0 |
| C13 |
C14 |
C15 |
H15 |
0.2 |
0.0 |
| C13 |
C14 |
C16 |
C18 |
179.8 |
179.7 |
| C13 |
C14 |
C16 |
H16 |
359.8 |
360.0 |
| H131 |
C13 |
N9 |
HN9 |
146.5 |
240.0 |
| N9 |
C13 |
H131 |
C14 |
123.8 |
120.0 |
| N9 |
C13 |
H131 |
H132 |
241.9 |
240.0 |
| C14 |
C13 |
H131 |
H132 |
118.1 |
120.0 |
| H131 |
C13 |
C14 |
C15 |
164.3 |
210.0 |
| H131 |
C13 |
C14 |
C16 |
344.3 |
30.0 |
| H132 |
C13 |
N9 |
HN9 |
37.0 |
120.0 |
| N9 |
C13 |
H132 |
C14 |
236.2 |
239.9 |
| N9 |
C13 |
H132 |
H131 |
118.1 |
119.9 |
| C14 |
C13 |
H132 |
H131 |
241.9 |
240.0 |
| H132 |
C13 |
C14 |
C15 |
273.7 |
330.0 |
| H132 |
C13 |
C14 |
C16 |
93.8 |
150.0 |
| C15 |
C14 |
C13 |
H131 |
164.3 |
210.0 |
| C15 |
C14 |
C13 |
H132 |
273.7 |
330.0 |
| C13 |
C14 |
C15 |
C16 |
180.1 |
180.0 |
| C15 |
C14 |
C16 |
C18 |
359.9 |
359.8 |
| C15 |
C14 |
C16 |
H16 |
179.9 |
180.0 |
| C17 |
C15 |
C14 |
H15 |
180.0 |
180.0 |
| C14 |
C15 |
C17 |
C19 |
359.9 |
0.0 |
| C14 |
C15 |
C17 |
H17 |
179.9 |
180.0 |
| C16 |
C14 |
C13 |
H131 |
344.3 |
30.0 |
| C16 |
C14 |
C13 |
H132 |
93.8 |
150.0 |
| C13 |
C14 |
C16 |
C15 |
179.9 |
180.0 |
| C16 |
C14 |
C15 |
C17 |
0.1 |
360.0 |
| C16 |
C14 |
C15 |
H15 |
180.1 |
180.0 |
| C18 |
C16 |
C14 |
H16 |
180.0 |
179.7 |
| C14 |
C16 |
C18 |
C19 |
0.0 |
0.5 |
| C14 |
C16 |
C18 |
H18 |
180.1 |
180.0 |
| C17 |
C15 |
C14 |
C16 |
0.1 |
360.0 |
| C14 |
C15 |
C17 |
H15 |
180.0 |
180.0 |
| C19 |
C17 |
C15 |
H17 |
180.0 |
180.0 |
| C15 |
C17 |
C19 |
C18 |
0.0 |
0.2 |
| C15 |
C17 |
C19 |
O20 |
179.7 |
180.0 |
| H15 |
C15 |
C14 |
C16 |
180.1 |
180.0 |
| C14 |
C15 |
H15 |
C17 |
180.0 |
180.0 |
| H15 |
C15 |
C17 |
C19 |
180.0 |
180.0 |
| H15 |
C15 |
C17 |
H17 |
359.9 |
360.0 |
| C14 |
C16 |
C18 |
H16 |
180.0 |
180.3 |
| C17 |
C19 |
C18 |
C16 |
360.0 |
359.5 |
| C19 |
C18 |
C16 |
H18 |
180.0 |
180.5 |
| C16 |
C18 |
C19 |
O20 |
180.3 |
179.7 |
| C14 |
C16 |
H16 |
C18 |
180.0 |
179.7 |
| H16 |
C16 |
C18 |
C19 |
180.1 |
180.2 |
| H16 |
C16 |
C18 |
H18 |
0.1 |
359.7 |
| C19 |
C17 |
C15 |
H15 |
180.0 |
180.0 |
| C15 |
C17 |
C19 |
H17 |
180.0 |
180.0 |
| C16 |
C18 |
C19 |
C17 |
360.0 |
359.5 |
| C17 |
C19 |
C18 |
H18 |
180.0 |
180.0 |
| C18 |
C19 |
C17 |
O20 |
180.3 |
180.2 |
| C17 |
C19 |
O20 |
C21 |
92.0 |
180.0 |
| H17 |
C17 |
C15 |
H15 |
359.9 |
360.0 |
| C15 |
C17 |
H17 |
C19 |
180.0 |
180.0 |
| H17 |
C17 |
C19 |
C18 |
180.0 |
180.3 |
| H17 |
C17 |
C19 |
O20 |
359.8 |
0.0 |
| C19 |
C18 |
C16 |
H16 |
180.1 |
180.2 |
| C16 |
C18 |
C19 |
H18 |
180.0 |
179.5 |
| C18 |
C19 |
C17 |
H17 |
180.0 |
180.3 |
| C17 |
C19 |
C18 |
O20 |
179.7 |
179.8 |
| C18 |
C19 |
O20 |
C21 |
271.8 |
359.7 |
| H18 |
C18 |
C16 |
H16 |
0.1 |
359.7 |
| C16 |
C18 |
H18 |
C19 |
180.0 |
180.5 |
| H18 |
C18 |
C19 |
O20 |
0.2 |
0.2 |
| O20 |
C19 |
C17 |
H17 |
359.8 |
0.0 |
| C17 |
C19 |
O20 |
C18 |
180.3 |
180.2 |
| O20 |
C19 |
C18 |
H18 |
0.2 |
0.2 |
| C19 |
O20 |
C21 |
H211 |
54.7 |
180.0 |
| C19 |
O20 |
C21 |
H212 |
180.0 |
300.0 |
| C19 |
O20 |
C21 |
H213 |
305.3 |
60.0 |
| H211 |
C21 |
O20 |
H212 |
234.7 |
240.0 |
| H211 |
C21 |
O20 |
H213 |
109.4 |
120.0 |
| H212 |
C21 |
O20 |
H213 |
234.7 |
240.0 |
| O20 |
C21 |
H211 |
H212 |
123.2 |
120.0 |
| O20 |
C21 |
H211 |
H213 |
241.6 |
240.0 |
| H212 |
C21 |
H211 |
H213 |
118.4 |
120.0 |
| O20 |
C21 |
H212 |
H211 |
234.7 |
239.9 |
| O20 |
C21 |
H212 |
H213 |
125.3 |
120.0 |
| H211 |
C21 |
H212 |
H213 |
250.6 |
240.1 |
| O20 |
C21 |
H213 |
H211 |
118.4 |
120.0 |
| O20 |
C21 |
H213 |
H212 |
236.8 |
240.0 |
| H211 |
C21 |
H213 |
H212 |
118.4 |
120.0 |