PDB Chemical Component TMT

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for TMT

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
S1	C2	1.709	1.737
S1	C5	1.729	1.787
C2	N3	1.339	1.312
C2	C6	1.494	1.507
N3	C4	1.404	1.317
N3	C7	1.475	1.465
C4	C5	1.360	1.358
C4	C8	1.496	1.507
C5	H5	1.103	1.079
C6	H61	1.115	1.090
C6	H62	1.115	1.090
C6	H63	1.114	1.089
C7	H71	1.116	1.089
C7	H72	1.116	1.091
C7	H73	1.115	1.090
C8	H81	1.114	1.090
C8	H82	1.116	1.090
C8	H83	1.115	1.090

Bond Angles for TMT

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	S1	C5	91.3	97.4
S1	C2	N3	111.1	102.2
S1	C2	C6	123.3	128.9
S1	C5	C4	111.7	100.6
S1	C5	H5	134.1	129.7
N3	C2	C6	125.7	129.0
C2	N3	C4	114.9	121.5
C2	N3	C7	123.6	119.3
C2	C6	H61	123.3	109.5
C2	C6	H62	107.3	109.5
C2	C6	H63	107.4	109.4
C4	N3	C7	121.5	119.2
N3	C4	C5	111.1	118.4
N3	C4	C8	121.4	120.8
N3	C7	H71	123.6	109.5
N3	C7	H72	107.2	109.4
N3	C7	H73	107.2	109.5
C5	C4	C8	127.5	120.8
C4	C5	H5	114.2	129.7
C4	C8	H81	121.4	109.5
C4	C8	H82	108.0	109.5
C4	C8	H83	108.0	109.4
H61	C6	H62	107.3	109.4
H61	C6	H63	107.3	109.5
H62	C6	H63	102.4	109.5
H71	C7	H72	107.1	109.4
H71	C7	H73	107.2	109.5
H72	C7	H73	102.5	109.5
H81	C8	H82	107.9	109.5
H81	C8	H83	108.0	109.5
H82	C8	H83	101.9	109.5

Torsion Angles for TMT

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C2	S1	C5	C4	0.0	360.0
C2	S1	C5	H5	180.1	180.0
N3	C2	S1	C6	179.9	180.2
S1	C2	N3	C4	0.2	359.5
S1	C2	N3	C7	179.8	180.1
S1	C2	C6	H61	180.0	0.0
S1	C2	C6	H62	305.3	120.0
S1	C2	C6	H63	54.8	240.0
C5	S1	C2	N3	359.9	0.3
C5	S1	C2	C6	179.9	180.0
N3	C4	C5	S1	0.0	359.8
S1	C5	C4	C8	179.9	180.0
C4	C5	S1	H5	180.0	179.9
N3	C2	S1	C5	359.9	0.3
S1	C2	N3	C6	180.1	179.8
N3	C2	C6	H61	0.1	179.7
N3	C2	C6	H62	125.3	299.7
N3	C2	C6	H63	234.8	59.7
C4	N3	C2	C7	180.4	179.4
C2	N3	C4	C5	359.9	0.6
C2	N3	C4	C8	180.0	180.3
C2	N3	C7	H71	180.0	263.7
C2	N3	C7	H72	305.2	23.6
C2	N3	C7	H73	54.7	143.6
C6	C2	S1	C5	179.9	180.0
S1	C2	C6	N3	179.9	180.3
C6	C2	N3	C4	180.1	179.7
C6	C2	N3	C7	359.7	0.3
H61	C6	C2	H62	234.8	240.0
H61	C6	C2	H63	125.3	120.0
H62	C6	C2	H63	250.5	240.0
S1	C5	C4	N3	0.0	359.8
C4	N3	C2	C6	180.1	179.7
C2	N3	C4	C7	179.6	180.6
C4	N3	C7	H71	359.6	84.3
C4	N3	C7	H72	124.8	204.2
C4	N3	C7	H73	234.3	324.2
C5	C4	N3	C8	179.9	180.3
N3	C4	C5	H5	180.0	179.7
N3	C4	C8	H81	180.0	276.1
N3	C4	C8	H82	305.3	36.1
N3	C4	C8	H83	54.7	156.1
C7	N3	C2	C6	359.7	0.3
C2	N3	C7	C4	180.4	179.4
C7	N3	C4	C5	180.3	180.0
C7	N3	C4	C8	0.4	359.7
H71	C7	N3	H72	234.8	240.1
H71	C7	N3	H73	125.3	120.1
H72	C7	N3	H73	250.5	240.0
S1	C5	C4	H5	180.0	180.1
C5	C4	N3	C7	180.3	180.0
N3	C4	C5	C8	180.1	179.7
C5	C4	C8	H81	0.1	95.8
C5	C4	C8	H82	125.4	215.8
C5	C4	C8	H83	234.8	335.8
C8	C4	N3	C7	0.4	359.7
N3	C4	C8	C5	179.9	180.3
C8	C4	C5	H5	359.9	359.9
H81	C8	C4	H82	234.7	240.0
H81	C8	C4	H83	125.3	120.0
H82	C8	C4	H83	250.6	240.0
S1	C5	H5	C4	180.0	179.9
H5	C5	C4	C8	359.9	359.9
C2	C6	H61	H62	125.2	120.0
C2	C6	H61	H63	234.7	240.0
H62	C6	H61	H63	109.5	120.0
C2	C6	H62	H61	225.7	240.0
C2	C6	H62	H63	112.9	120.0
H61	C6	H62	H63	247.2	240.0
C2	C6	H63	H61	134.4	120.0
C2	C6	H63	H62	247.2	240.0
H61	C6	H63	H62	112.8	120.0
N3	C7	H71	H72	125.3	119.9
N3	C7	H71	H73	234.7	239.9
H72	C7	H71	H73	109.4	120.0
N3	C7	H72	H71	225.4	240.1
N3	C7	H72	H73	112.7	120.0
H71	C7	H72	H73	247.3	239.9
N3	C7	H73	H71	134.7	120.1
N3	C7	H73	H72	247.3	240.0
H71	C7	H73	H72	112.6	120.0
C4	C8	H81	H82	125.3	120.0
C4	C8	H81	H83	234.7	240.0
H82	C8	H81	H83	109.4	120.0
C4	C8	H82	H81	227.1	240.0
C4	C8	H82	H83	113.5	120.0
H81	C8	H82	H83	246.5	240.0
C4	C8	H83	H81	133.0	120.0
C4	C8	H83	H82	246.5	240.0
H81	C8	H83	H82	113.5	120.0