PDB Chemical Component TMQ

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for TMQ

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
N1	C2	1.341	1.319
N1	C3A	1.374	1.342
N1	HN	0.980	0.970
C2	N3	1.355	1.330
C2	N24	1.355	1.384
N3	C4	1.370	1.325
C4	C4A	1.464	1.417
C4	N25	1.366	1.379
C3A	C4A	1.472	1.416
C3A	C8	1.425	1.401
C4A	C5	1.476	1.399
C5	C6	1.448	1.364
C5	C17	1.518	1.507
C6	C7	1.405	1.392
C6	C9	1.521	1.507
C7	C8	1.394	1.364
C7	H7	1.080	1.080
C8	H8	1.080	1.080
C9	N10	1.467	1.465
C9	H91	1.090	1.090
C9	H92	1.089	1.089
N10	C11	1.377	1.399
N10	HN1	0.981	0.970
C11	C12	1.424	1.389
C11	C16	1.414	1.388
C12	C13	1.443	1.386
C12	H12	1.079	1.080
C13	C14	1.417	1.390
C13	O18	1.428	1.361
C14	C15	1.419	1.390
C14	O19	1.380	1.362
C15	C16	1.444	1.386
C15	O20	1.427	1.360
C16	H16	1.079	1.080
C17	H171	1.089	1.091
C17	H172	1.084	1.091
C17	H173	1.091	1.089
O18	C21	1.428	1.429
O19	C22	1.406	1.429
O20	C23	1.428	1.429
C21	H211	1.091	1.090
C21	H212	1.090	1.090
C21	H213	1.090	1.091
C22	H221	1.090	1.090
C22	H222	1.090	1.091
C22	H223	1.090	1.089
C23	H231	1.089	1.091
C23	H232	1.090	1.089
C23	H233	1.090	1.090
N24	HN21	1.000	0.970
N24	HN22	1.000	0.970
N25	HN51	1.000	0.970
N25	HN52	0.980	0.970

Bond Angles for TMQ

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	N1	C3A	121.9	120.4
C2	N1	HN	119.1	119.9
N1	C2	N3	122.1	122.8
N1	C2	N24	118.9	118.6
C3A	N1	HN	119.0	119.7
N1	C3A	C4A	119.5	118.8
N1	C3A	C8	120.4	121.9
N3	C2	N24	119.0	118.6
C2	N3	C4	120.9	121.4
C2	N24	HN21	120.0	120.0
C2	N24	HN22	120.0	120.0
N3	C4	C4A	120.5	118.3
N3	C4	N25	114.8	120.8
C4A	C4	N25	124.7	120.9
C4	C4A	C3A	115.1	118.3
C4	C4A	C5	127.4	122.0
C4	N25	HN51	119.5	120.0
C4	N25	HN52	121.0	120.0
C4A	C3A	C8	120.0	119.3
C3A	C4A	C5	117.5	119.7
C3A	C8	C7	121.3	119.6
C3A	C8	H8	119.4	120.2
C4A	C5	C6	119.3	119.5
C4A	C5	C17	122.7	120.3
C6	C5	C17	118.1	120.2
C5	C6	C7	120.7	120.9
C5	C6	C9	120.7	119.6
C5	C17	H171	110.2	109.5
C5	C17	H172	111.2	109.5
C5	C17	H173	110.1	109.5
C7	C6	C9	118.6	119.5
C6	C7	C8	121.2	121.0
C6	C7	H7	119.4	119.5
C6	C9	N10	113.6	109.4
C6	C9	H91	110.3	109.5
C6	C9	H92	110.3	109.5
C8	C7	H7	119.4	119.5
C7	C8	H8	119.3	120.2
N10	C9	H91	106.9	109.5
N10	C9	H92	106.9	109.5
C9	N10	C11	121.4	120.0
C9	N10	HN1	119.3	120.0
H91	C9	H92	108.6	109.5
C11	N10	HN1	119.3	120.0
N10	C11	C12	121.1	120.0
N10	C11	C16	119.1	120.0
C12	C11	C16	119.8	120.0
C11	C12	C13	120.3	120.0
C11	C12	H12	119.8	119.9
C11	C16	C15	120.4	120.0
C11	C16	H16	119.7	120.0
C13	C12	H12	119.9	120.0
C12	C13	C14	119.3	120.0
C12	C13	O18	122.4	120.0
C14	C13	O18	118.3	120.0
C13	C14	C15	120.9	120.0
C13	C14	O19	119.6	120.0
C13	O18	C21	112.3	106.8
C15	C14	O19	119.5	120.0
C14	C15	C16	119.3	120.0
C14	C15	O20	118.3	120.0
C14	O19	C22	108.1	106.9
C16	C15	O20	122.4	120.0
C15	C16	H16	119.9	120.0
C15	O20	C23	112.3	106.8
H171	C17	H172	108.4	109.5
H171	C17	H173	108.5	109.5
H172	C17	H173	108.3	109.5
O18	C21	H211	110.3	109.5
O18	C21	H212	110.3	109.5
O18	C21	H213	110.4	109.4
O19	C22	H221	110.4	109.4
O19	C22	H222	110.4	109.5
O19	C22	H223	110.3	109.5
O20	C23	H231	110.3	109.4
O20	C23	H232	110.3	109.5
O20	C23	H233	110.3	109.5
H211	C21	H212	108.7	109.5
H211	C21	H213	108.6	109.4
H212	C21	H213	108.6	109.5
H221	C22	H222	108.6	109.4
H221	C22	H223	108.5	109.5
H222	C22	H223	108.6	109.5
H231	C23	H232	108.6	109.4
H231	C23	H233	108.7	109.5
H232	C23	H233	108.6	109.5
HN21	N24	HN22	120.0	120.0
HN51	N25	HN52	119.5	120.0

Torsion Angles for TMQ

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C3A	N1	C2	HN	179.9	180.0
C2	N1	C3A	C4A	0.1	360.0
C2	N1	C3A	C8	180.0	180.0
N3	C2	N1	N24	179.9	179.9
N1	C2	N3	C4	0.1	0.0
N1	C2	N24	HN21	359.9	359.9
N1	C2	N24	HN22	180.0	180.0
C2	N1	C3A	HN	180.1	180.0
C3A	N1	C2	N3	359.9	360.0
C3A	N1	C2	N24	180.0	180.0
C4	C4A	C3A	N1	360.0	0.0
C4A	C3A	N1	C8	180.1	180.0
N1	C3A	C4A	C5	179.9	179.7
N1	C3A	C8	C7	180.0	180.0
N1	C3A	C8	H8	0.1	360.0
C2	N1	HN	C3A	179.9	180.0
HN	N1	C2	N3	180.0	180.0
HN	N1	C2	N24	0.1	0.1
HN	N1	C3A	C4A	180.0	180.0
HN	N1	C3A	C8	359.9	360.0
N3	C2	N1	C3A	359.9	360.0
N3	C2	N1	HN	180.0	180.0
N1	C2	N3	N24	180.1	180.1
N3	C2	N24	HN21	180.0	180.0
N3	C2	N24	HN22	0.1	0.1
C2	N3	C4	C4A	360.0	360.0
C2	N3	C4	N25	179.9	180.0
N24	C2	N1	C3A	180.0	180.0
N24	C2	N1	HN	0.1	0.1
N1	C2	N24	N3	179.9	179.9
N24	C2	N3	C4	180.0	180.0
HN21	N24	C2	HN22	179.9	180.0
C4	N3	C2	N24	180.0	180.0
C4A	C4	N3	N25	180.0	180.0
N3	C4	C4A	C3A	360.0	360.0
N3	C4	C4A	C5	180.1	180.3
N3	C4	N25	HN51	360.0	137.4
N3	C4	N25	HN52	180.0	317.4
N1	C3A	C4A	C4	360.0	0.0
N3	C4	C4A	N25	180.0	180.0
C4A	C4	N25	HN51	179.9	317.4
C4A	C4	N25	HN52	360.0	137.4
C4	C4A	C3A	C8	180.1	180.0
C3A	C4A	C4	C5	179.9	179.7
C4	C4A	C5	C6	179.9	180.2
C4	C4A	C5	C17	359.9	360.0
N3	C4	N25	C4A	180.0	180.0
N25	C4	C4A	C3A	180.0	180.0
N25	C4	C4A	C5	0.1	0.3
HN51	N25	C4	HN52	179.9	180.0
C4A	C3A	N1	HN	180.0	180.0
N1	C3A	C4A	C8	179.9	180.0
C3A	C4A	C4	N25	180.0	180.0
C4	C4A	C3A	C5	180.1	180.3
C4A	C3A	C8	C7	360.0	0.0
C4A	C3A	C8	H8	180.0	180.0
C3A	C4A	C5	C6	0.0	0.5
C3A	C4A	C5	C17	180.0	180.3
C8	C3A	N1	HN	359.9	360.0
N1	C3A	C8	C4A	180.1	180.0
C8	C3A	C4A	C5	360.0	359.7
C6	C7	C8	C3A	0.1	360.0
C3A	C8	C7	H7	180.0	180.0
C7	C8	C3A	H8	180.0	180.0
C5	C4A	C4	N25	0.1	0.3
C4	C4A	C5	C3A	179.9	179.7
C5	C4A	C3A	C8	360.0	359.7
C6	C5	C4A	C17	180.0	180.2
C4A	C5	C6	C7	0.0	359.5
C4A	C5	C6	C9	180.0	179.7
C4A	C5	C17	H171	300.0	82.5
C4A	C5	C17	H172	179.7	202.5
C4A	C5	C17	H173	59.6	322.6
C4A	C5	C6	C17	180.0	179.8
C6	C5	C17	H171	120.0	262.4
C6	C5	C17	H172	359.7	22.4
C6	C5	C17	H173	239.6	142.4
C7	C6	C5	C9	180.0	179.8
C5	C6	C7	C8	359.9	0.3
C5	C6	C7	H7	180.0	180.2
C5	C6	C9	N10	192.7	79.8
C5	C6	C9	H91	72.7	319.8
C5	C6	C9	H92	312.7	199.8
C4A	C5	C17	C6	180.0	180.2
C17	C5	C6	C7	180.0	179.7
C17	C5	C6	C9	0.0	359.9
H171	C17	C5	H172	120.3	240.0
H171	C17	C5	H173	240.4	120.0
H172	C17	C5	H173	120.1	240.0
C3A	C8	C7	C6	0.1	360.0
C7	C6	C5	C17	180.0	179.7
C5	C6	C7	C9	180.0	180.2
C7	C6	C9	N10	12.7	260.0
C7	C6	C9	H91	252.7	140.0
C7	C6	C9	H92	132.7	20.0
C8	C7	C6	H7	179.9	180.0
C6	C7	C8	H8	180.0	180.0
C9	C6	C5	C17	0.0	359.9
C5	C6	C9	C7	180.0	179.8
C9	C6	C7	C8	179.9	180.1
C9	C6	C7	H7	0.0	0.0
N10	C9	C6	H91	120.0	120.0
N10	C9	C6	H92	239.9	240.0
C6	C9	N10	C11	69.2	180.0
C6	C9	N10	HN1	249.5	360.0
H91	C9	C6	H92	119.9	120.0
C3A	C8	C7	H8	180.0	180.0
C8	C7	C6	C9	179.9	180.1
C6	C7	C8	H7	180.1	180.0
H7	C7	C6	C9	0.0	0.0
C6	C7	H7	C8	179.9	180.0
H7	C7	C8	H8	360.0	0.1
C3A	C8	H8	C7	180.0	180.1
H8	C8	C7	H7	360.0	0.1
C6	C9	N10	H91	238.1	240.0
C6	C9	N10	H92	122.0	120.0
H91	C9	N10	H92	243.8	240.0
C11	N10	C9	HN1	179.6	180.1
C9	N10	C11	C12	20.4	180.0
C9	N10	C11	C16	200.1	360.0
C6	C9	H91	N10	123.9	120.0
C6	C9	H91	H92	239.0	240.0
N10	C9	H91	H92	115.1	120.0
H91	C9	N10	C11	191.0	300.0
H91	C9	N10	HN1	11.4	120.0
C6	C9	H92	N10	236.0	240.0
C6	C9	H92	H91	120.9	120.0
N10	C9	H92	H91	244.9	240.0
H92	C9	N10	C11	307.2	60.1
H92	C9	N10	HN1	127.6	240.0
C11	N10	C9	H91	191.0	300.0
C11	N10	C9	H92	307.2	60.1
C9	N10	C11	HN1	180.4	179.9
C12	C11	N10	C16	180.3	180.0
N10	C11	C12	C13	179.8	180.0
N10	C11	C12	H12	359.6	360.0
N10	C11	C16	C15	180.3	180.0
N10	C11	C16	H16	0.2	0.0
HN1	N10	C9	H91	11.4	120.0
HN1	N10	C9	H92	127.6	240.0
C9	N10	HN1	C11	179.6	180.1
HN1	N10	C11	C12	200.0	0.1
HN1	N10	C11	C16	19.8	180.0
C12	C11	N10	HN1	200.0	0.1
N10	C11	C12	C16	179.7	180.0
C12	C11	C16	C15	0.0	0.0
C12	C11	C16	H16	180.0	180.0
C13	C12	C11	H12	180.2	180.0
C11	C12	C13	C14	359.8	0.2
C11	C12	C13	O18	180.0	180.0
C16	C11	N10	HN1	19.8	180.0
N10	C11	C16	C12	180.3	180.0
C16	C11	C12	C13	0.1	0.1
C16	C11	C12	H12	179.9	180.0
C14	C15	C16	C11	359.9	359.7
C11	C16	C15	O20	179.9	180.0
C15	C16	C11	H16	180.1	180.0
C13	C12	C11	C16	0.1	0.1
C11	C12	C13	H12	179.8	180.0
C14	C13	C12	O18	179.8	180.2
C12	C13	C14	C15	0.2	359.5
C12	C13	C14	O19	180.2	180.0
C12	C13	O18	C21	21.7	359.9
H12	C12	C11	C16	179.9	180.0
C11	C12	H12	C13	180.2	180.0
H12	C12	C13	C14	180.0	180.2
H12	C12	C13	O18	0.2	0.0
C14	C13	C12	H12	180.0	180.2
C12	C13	C14	O18	180.2	179.8
C14	C13	O18	C21	201.9	179.8
C15	C14	C13	O19	180.0	179.5
C13	C14	C15	C16	359.9	0.5
C13	C14	C15	O20	179.9	180.2
C13	C14	O19	C22	258.8	269.6
O18	C13	C12	H12	0.2	0.0
C12	C13	O18	C14	179.8	180.2
O18	C13	C14	C15	180.0	179.7
O18	C13	C14	O19	0.1	0.2
C13	O18	C21	H211	279.0	300.0
C13	O18	C21	H212	159.0	60.0
C13	O18	C21	H213	39.0	180.0
C11	C16	C15	C14	359.9	359.7
C15	C14	C13	O18	180.0	179.7
C13	C14	C15	O19	180.0	180.5
C15	C14	O19	C22	78.9	90.0
C16	C15	C14	O20	180.0	180.3
C14	C15	C16	H16	180.0	179.7
C14	C15	O20	C23	158.1	180.3
O19	C14	C13	O18	0.1	0.2
C13	C14	O19	C15	180.0	179.5
O19	C14	C15	C16	179.9	180.1
O19	C14	C15	O20	359.9	359.7
C14	O19	C22	H221	177.9	300.0
C14	O19	C22	H222	57.9	59.9
C14	O19	C22	H223	297.8	180.0
C11	C16	C15	H16	179.9	180.0
C16	C15	C14	O19	179.9	180.1
C14	C15	C16	O20	180.0	179.7
C16	C15	O20	C23	338.1	360.0
O20	C15	C14	O19	359.9	359.7
C14	C15	O20	C16	180.0	180.3
O20	C15	C16	H16	0.0	0.0
C15	O20	C23	H231	314.0	180.0
C15	O20	C23	H232	194.0	300.0
C15	O20	C23	H233	74.0	60.1
C11	C16	H16	C15	180.1	180.0
H16	C16	C15	O20	0.0	0.0
C5	C17	H171	H172	238.0	120.0
C5	C17	H171	H173	120.6	240.0
H172	C17	H171	H173	242.6	120.0
C5	C17	H172	H171	121.4	240.0
C5	C17	H172	H173	238.9	120.0
H171	C17	H172	H173	117.5	240.0
C5	C17	H173	H171	239.3	120.0
C5	C17	H173	H172	121.8	240.0
H171	C17	H173	H172	242.5	120.0
H211	C21	O18	H212	120.0	239.9
H211	C21	O18	H213	240.0	119.9
H212	C21	O18	H213	120.0	240.0
H221	C22	O19	H222	120.1	240.1
H221	C22	O19	H223	240.1	120.1
H222	C22	O19	H223	120.1	239.9
H231	C23	O20	H232	120.0	240.0
H231	C23	O20	H233	240.0	120.0
H232	C23	O20	H233	120.0	239.9
O18	C21	H211	H212	239.0	120.1
O18	C21	H211	H213	121.0	240.1
H212	C21	H211	H213	242.1	120.0
O18	C21	H212	H211	121.0	239.9
O18	C21	H212	H213	238.9	120.0
H211	C21	H212	H213	117.9	240.0
O18	C21	H213	H211	239.0	120.0
O18	C21	H213	H212	121.0	240.0
H211	C21	H213	H212	242.0	120.0
O19	C22	H221	H222	238.9	119.9
O19	C22	H221	H223	121.0	240.0
H222	C22	H221	H223	242.1	120.0
O19	C22	H222	H221	121.1	240.1
O19	C22	H222	H223	238.9	120.1
H221	C22	H222	H223	117.8	240.0
O19	C22	H223	H221	239.0	120.0
O19	C22	H223	H222	121.1	240.0
H221	C22	H223	H222	242.1	120.0
O20	C23	H231	H232	239.0	120.0
O20	C23	H231	H233	121.0	240.0
H232	C23	H231	H233	242.0	120.0
O20	C23	H232	H231	121.0	240.0
O20	C23	H232	H233	239.0	120.0
H231	C23	H232	H233	118.0	240.0
O20	C23	H233	H231	239.0	120.0
O20	C23	H233	H232	120.9	240.0
H231	C23	H233	H232	242.0	120.0
C2	N24	HN21	HN22	180.1	180.0
C2	N24	HN22	HN21	179.9	180.0
C4	N25	HN51	HN52	180.1	180.0
C4	N25	HN52	HN51	179.9	180.0