PDB Chemical Component TLM
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for TLM
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
S1 |
C1 |
1.775 |
1.787 |
S1 |
C4 |
1.862 |
1.835 |
C1 |
C2 |
1.438 |
1.418 |
C1 |
O1 |
1.222 |
1.217 |
C2 |
C3 |
1.345 |
1.319 |
C2 |
C9 |
1.500 |
1.507 |
C3 |
C4 |
1.526 |
1.517 |
C3 |
O2 |
1.345 |
1.349 |
C4 |
C5 |
1.527 |
1.507 |
C4 |
C10 |
1.543 |
1.530 |
C5 |
C6 |
1.355 |
1.328 |
C5 |
H51 |
1.103 |
1.080 |
C6 |
C7 |
1.491 |
1.472 |
C6 |
C11 |
1.502 |
1.506 |
C7 |
C8 |
1.334 |
1.329 |
C7 |
H71 |
1.104 |
1.080 |
C8 |
H81 |
1.103 |
1.080 |
C8 |
H82 |
1.104 |
1.080 |
C9 |
H91 |
1.115 |
1.089 |
C9 |
H92 |
1.114 |
1.091 |
C9 |
H93 |
1.115 |
1.090 |
O2 |
HO2 |
0.951 |
0.967 |
C10 |
H101 |
1.115 |
1.090 |
C10 |
H102 |
1.115 |
1.089 |
C10 |
H103 |
1.115 |
1.091 |
C11 |
H111 |
1.115 |
1.090 |
C11 |
H112 |
1.114 |
1.091 |
C11 |
H113 |
1.114 |
1.090 |
Bond Angles for TLM
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C1 |
S1 |
C4 |
93.7 |
97.9 |
S1 |
C1 |
C2 |
111.7 |
103.5 |
S1 |
C1 |
O1 |
121.6 |
128.2 |
S1 |
C4 |
C3 |
102.0 |
101.0 |
S1 |
C4 |
C5 |
109.0 |
111.1 |
S1 |
C4 |
C10 |
109.1 |
111.1 |
C2 |
C1 |
O1 |
126.7 |
128.2 |
C1 |
C2 |
C3 |
112.5 |
121.3 |
C1 |
C2 |
C9 |
121.4 |
119.3 |
C3 |
C2 |
C9 |
126.1 |
119.4 |
C2 |
C3 |
C4 |
119.8 |
116.3 |
C2 |
C3 |
O2 |
121.5 |
121.8 |
C2 |
C9 |
H91 |
121.4 |
109.6 |
C2 |
C9 |
H92 |
107.9 |
109.4 |
C2 |
C9 |
H93 |
107.9 |
109.5 |
C4 |
C3 |
O2 |
118.7 |
121.9 |
C3 |
C4 |
C5 |
117.0 |
111.2 |
C3 |
C4 |
C10 |
108.8 |
111.1 |
C3 |
O2 |
HO2 |
121.6 |
119.9 |
C5 |
C4 |
C10 |
110.4 |
111.0 |
C4 |
C5 |
C6 |
133.0 |
120.0 |
C4 |
C5 |
H51 |
121.3 |
120.0 |
C4 |
C10 |
H101 |
109.1 |
109.5 |
C4 |
C10 |
H102 |
112.3 |
109.5 |
C4 |
C10 |
H103 |
112.3 |
109.5 |
C6 |
C5 |
H51 |
105.7 |
120.1 |
C5 |
C6 |
C7 |
116.3 |
120.0 |
C5 |
C6 |
C11 |
125.8 |
120.0 |
C7 |
C6 |
C11 |
117.9 |
120.0 |
C6 |
C7 |
C8 |
127.9 |
120.0 |
C6 |
C7 |
H71 |
122.6 |
120.0 |
C6 |
C11 |
H111 |
125.8 |
109.5 |
C6 |
C11 |
H112 |
106.4 |
109.5 |
C6 |
C11 |
H113 |
106.4 |
109.5 |
C8 |
C7 |
H71 |
109.5 |
120.0 |
C7 |
C8 |
H81 |
109.6 |
120.0 |
C7 |
C8 |
H82 |
127.9 |
120.0 |
H81 |
C8 |
H82 |
122.5 |
120.0 |
H91 |
C9 |
H92 |
108.0 |
109.5 |
H91 |
C9 |
H93 |
107.9 |
109.5 |
H92 |
C9 |
H93 |
102.0 |
109.4 |
H101 |
C10 |
H102 |
112.3 |
109.4 |
H101 |
C10 |
H103 |
112.4 |
109.4 |
H102 |
C10 |
H103 |
98.1 |
109.4 |
H111 |
C11 |
H112 |
106.4 |
109.5 |
H111 |
C11 |
H113 |
106.5 |
109.5 |
H112 |
C11 |
H113 |
103.1 |
109.4 |
Torsion Angles for TLM
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C1 |
S1 |
C4 |
C3 |
5.0 |
360.0 |
C1 |
S1 |
C4 |
C5 |
129.3 |
118.0 |
C1 |
S1 |
C4 |
C10 |
250.0 |
242.0 |
C2 |
C1 |
S1 |
O1 |
180.1 |
180.0 |
S1 |
C1 |
C2 |
C3 |
3.8 |
360.0 |
S1 |
C1 |
C2 |
C9 |
183.8 |
180.0 |
C4 |
S1 |
C1 |
C2 |
354.7 |
0.0 |
C4 |
S1 |
C1 |
O1 |
174.6 |
180.0 |
C2 |
C3 |
C4 |
S1 |
355.8 |
360.0 |
S1 |
C4 |
C3 |
O2 |
175.6 |
180.0 |
C3 |
C4 |
S1 |
C5 |
235.7 |
242.0 |
C3 |
C4 |
S1 |
C10 |
115.0 |
118.0 |
C5 |
C4 |
S1 |
C10 |
239.3 |
235.9 |
S1 |
C4 |
C5 |
C6 |
47.0 |
47.7 |
S1 |
C4 |
C5 |
H51 |
227.0 |
227.8 |
S1 |
C4 |
C10 |
H101 |
180.0 |
294.7 |
S1 |
C4 |
C10 |
H102 |
305.2 |
54.7 |
S1 |
C4 |
C10 |
H103 |
54.7 |
174.7 |
C2 |
C1 |
S1 |
C4 |
354.7 |
0.0 |
S1 |
C1 |
C2 |
O1 |
179.9 |
180.0 |
C3 |
C2 |
C1 |
C9 |
180.0 |
180.0 |
C1 |
C2 |
C3 |
C4 |
0.5 |
0.0 |
C1 |
C2 |
C3 |
O2 |
180.8 |
180.0 |
C1 |
C2 |
C9 |
H91 |
180.0 |
0.1 |
C1 |
C2 |
C9 |
H92 |
305.3 |
120.1 |
C1 |
C2 |
C9 |
H93 |
54.8 |
240.0 |
O1 |
C1 |
S1 |
C4 |
174.6 |
180.0 |
S1 |
C1 |
O1 |
C2 |
180.1 |
180.0 |
O1 |
C1 |
C2 |
C3 |
183.9 |
180.0 |
O1 |
C1 |
C2 |
C9 |
3.8 |
360.0 |
S1 |
C4 |
C3 |
C2 |
355.8 |
360.0 |
C3 |
C2 |
C1 |
O1 |
183.9 |
180.0 |
C1 |
C2 |
C3 |
C9 |
180.0 |
180.0 |
C3 |
C2 |
C9 |
H91 |
360.0 |
180.1 |
C3 |
C2 |
C9 |
H92 |
125.3 |
300.1 |
C3 |
C2 |
C9 |
H93 |
234.7 |
60.0 |
C4 |
C3 |
C2 |
O2 |
179.7 |
180.0 |
C2 |
C3 |
C4 |
C5 |
237.1 |
242.0 |
C2 |
C3 |
C4 |
C10 |
111.1 |
117.9 |
C2 |
C3 |
O2 |
HO2 |
179.9 |
0.1 |
C9 |
C2 |
C1 |
O1 |
3.8 |
360.0 |
C1 |
C2 |
C9 |
C3 |
180.0 |
180.0 |
C9 |
C2 |
C3 |
C4 |
180.5 |
180.0 |
C9 |
C2 |
C3 |
O2 |
0.8 |
360.0 |
H91 |
C9 |
C2 |
H92 |
234.7 |
240.0 |
H91 |
C9 |
C2 |
H93 |
125.2 |
120.1 |
H92 |
C9 |
C2 |
H93 |
250.5 |
240.1 |
S1 |
C4 |
C3 |
C5 |
118.8 |
118.0 |
S1 |
C4 |
C3 |
C10 |
244.7 |
242.1 |
C4 |
C3 |
C2 |
C9 |
180.5 |
180.0 |
C2 |
C3 |
C4 |
O2 |
180.3 |
180.0 |
C4 |
C3 |
O2 |
HO2 |
0.2 |
180.0 |
C5 |
C4 |
C3 |
C10 |
125.9 |
124.1 |
C3 |
C4 |
C5 |
C6 |
162.0 |
159.3 |
C3 |
C4 |
C5 |
H51 |
342.0 |
339.4 |
C3 |
C4 |
C10 |
H101 |
69.5 |
183.1 |
C3 |
C4 |
C10 |
H102 |
194.6 |
303.1 |
C3 |
C4 |
C10 |
H103 |
304.1 |
63.1 |
O2 |
C3 |
C2 |
C9 |
0.8 |
360.0 |
C2 |
C3 |
O2 |
C4 |
179.7 |
180.0 |
O2 |
C3 |
C4 |
C5 |
56.8 |
62.0 |
O2 |
C3 |
C4 |
C10 |
290.8 |
297.9 |
S1 |
C4 |
C5 |
C3 |
245.0 |
248.4 |
S1 |
C4 |
C5 |
C10 |
119.9 |
124.2 |
C5 |
C4 |
C3 |
O2 |
56.8 |
62.0 |
C3 |
C4 |
C5 |
C10 |
234.9 |
235.8 |
C5 |
C4 |
C10 |
H101 |
299.8 |
58.8 |
C5 |
C4 |
C10 |
H102 |
65.0 |
178.9 |
C5 |
C4 |
C10 |
H103 |
174.5 |
298.9 |
C6 |
C5 |
C4 |
H51 |
180.0 |
179.9 |
C4 |
C5 |
C6 |
C7 |
185.9 |
187.2 |
C4 |
C5 |
C6 |
C11 |
5.7 |
7.3 |
S1 |
C4 |
C10 |
C3 |
110.6 |
111.6 |
S1 |
C4 |
C10 |
C5 |
240.2 |
235.8 |
C10 |
C4 |
C3 |
O2 |
290.8 |
297.9 |
C3 |
C4 |
C10 |
C5 |
129.6 |
124.2 |
C10 |
C4 |
C5 |
C6 |
287.1 |
283.5 |
C10 |
C4 |
C5 |
H51 |
107.1 |
103.6 |
H101 |
C10 |
C4 |
H102 |
234.8 |
240.0 |
H101 |
C10 |
C4 |
H103 |
125.3 |
120.0 |
H102 |
C10 |
C4 |
H103 |
250.5 |
240.0 |
C6 |
C5 |
C4 |
C10 |
287.1 |
283.5 |
C4 |
C5 |
C6 |
H51 |
180.0 |
180.1 |
C7 |
C6 |
C5 |
C11 |
180.2 |
179.9 |
C5 |
C6 |
C7 |
C8 |
180.3 |
180.1 |
C5 |
C6 |
C7 |
H71 |
0.3 |
0.1 |
C5 |
C6 |
C11 |
H111 |
180.0 |
5.4 |
C5 |
C6 |
C11 |
H112 |
305.2 |
125.4 |
C5 |
C6 |
C11 |
H113 |
54.7 |
245.4 |
H51 |
C5 |
C4 |
C10 |
107.1 |
103.6 |
C4 |
C5 |
H51 |
C6 |
180.0 |
179.9 |
H51 |
C5 |
C6 |
C7 |
5.9 |
7.1 |
H51 |
C5 |
C6 |
C11 |
185.7 |
187.2 |
C7 |
C6 |
C5 |
H51 |
5.9 |
7.1 |
C5 |
C6 |
C7 |
C11 |
179.8 |
180.1 |
C7 |
C6 |
C11 |
H111 |
359.8 |
185.5 |
C7 |
C6 |
C11 |
H112 |
125.0 |
305.5 |
C7 |
C6 |
C11 |
H113 |
234.5 |
65.5 |
C8 |
C7 |
C6 |
H71 |
180.0 |
180.0 |
C6 |
C7 |
C8 |
H81 |
0.0 |
180.0 |
C6 |
C7 |
C8 |
H82 |
180.0 |
0.0 |
C11 |
C6 |
C5 |
H51 |
185.7 |
187.2 |
C5 |
C6 |
C11 |
C7 |
180.2 |
179.9 |
C11 |
C6 |
C7 |
C8 |
0.5 |
360.0 |
C11 |
C6 |
C7 |
H71 |
180.5 |
180.0 |
H111 |
C11 |
C6 |
H112 |
234.8 |
239.9 |
H111 |
C11 |
C6 |
H113 |
125.3 |
120.0 |
H112 |
C11 |
C6 |
H113 |
250.5 |
240.0 |
C8 |
C7 |
C6 |
C11 |
0.5 |
360.0 |
C6 |
C7 |
C8 |
H71 |
180.0 |
180.0 |
H81 |
C8 |
C7 |
H82 |
180.0 |
180.0 |
H71 |
C7 |
C6 |
C11 |
180.5 |
180.0 |
C6 |
C7 |
H71 |
C8 |
180.0 |
180.0 |
H71 |
C7 |
C8 |
H81 |
180.0 |
360.0 |
H71 |
C7 |
C8 |
H82 |
0.0 |
180.0 |
H81 |
C8 |
C7 |
H71 |
180.0 |
360.0 |
C7 |
C8 |
H81 |
H82 |
180.0 |
180.0 |
H82 |
C8 |
C7 |
H71 |
0.0 |
180.0 |
C7 |
C8 |
H82 |
H81 |
180.0 |
180.0 |
C2 |
C9 |
H91 |
H92 |
125.3 |
120.0 |
C2 |
C9 |
H91 |
H93 |
234.8 |
239.9 |
H92 |
C9 |
H91 |
H93 |
109.5 |
120.0 |
C2 |
C9 |
H92 |
H91 |
227.1 |
239.9 |
C2 |
C9 |
H92 |
H93 |
113.5 |
120.0 |
H91 |
C9 |
H92 |
H93 |
246.5 |
240.0 |
C2 |
C9 |
H93 |
H91 |
132.9 |
120.1 |
C2 |
C9 |
H93 |
H92 |
246.5 |
240.1 |
H91 |
C9 |
H93 |
H92 |
113.6 |
120.0 |
C4 |
C10 |
H101 |
H102 |
125.2 |
120.1 |
C4 |
C10 |
H101 |
H103 |
234.7 |
240.0 |
H102 |
C10 |
H101 |
H103 |
109.5 |
119.9 |
C4 |
C10 |
H102 |
H101 |
236.6 |
239.9 |
C4 |
C10 |
H102 |
H103 |
118.2 |
120.0 |
H101 |
C10 |
H102 |
H103 |
241.7 |
240.1 |
C4 |
C10 |
H103 |
H101 |
123.5 |
120.1 |
C4 |
C10 |
H103 |
H102 |
241.7 |
239.9 |
H101 |
C10 |
H103 |
H102 |
118.2 |
119.9 |
C6 |
C11 |
H111 |
H112 |
125.2 |
120.0 |
C6 |
C11 |
H111 |
H113 |
234.8 |
240.0 |
H112 |
C11 |
H111 |
H113 |
109.5 |
120.0 |
C6 |
C11 |
H112 |
H111 |
223.7 |
240.0 |
C6 |
C11 |
H112 |
H113 |
111.8 |
120.0 |
H111 |
C11 |
H112 |
H113 |
248.1 |
240.0 |
C6 |
C11 |
H113 |
H111 |
136.3 |
120.0 |
C6 |
C11 |
H113 |
H112 |
248.2 |
240.0 |
H111 |
C11 |
H113 |
H112 |
111.8 |
120.0 |