PDB Chemical Component TIC
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for TIC
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
N1 |
1.495 |
1.469 |
C1 |
C3 |
1.537 |
1.533 |
N1 |
C2 |
1.486 |
1.470 |
N1 |
C6 |
1.501 |
1.469 |
S1 |
C5 |
1.665 |
1.756 |
S1 |
C9 |
1.706 |
1.757 |
CL1 |
C10 |
1.747 |
1.736 |
C2 |
C4 |
1.477 |
1.523 |
C3 |
C5 |
1.460 |
1.515 |
C4 |
C5 |
1.381 |
1.348 |
C4 |
C8 |
1.429 |
1.390 |
C6 |
C7 |
1.501 |
1.507 |
C7 |
C10 |
1.404 |
1.384 |
C7 |
C11 |
1.405 |
1.382 |
C8 |
C9 |
1.359 |
1.331 |
C10 |
C12 |
1.393 |
1.384 |
C11 |
C13 |
1.397 |
1.383 |
C12 |
C14 |
1.390 |
1.381 |
C13 |
C14 |
1.397 |
1.382 |
C1 |
H1 |
1.100 |
1.090 |
C1 |
H1A |
1.100 |
1.090 |
C2 |
H2 |
1.100 |
1.090 |
C2 |
H2A |
1.100 |
1.091 |
C3 |
H3 |
1.100 |
1.091 |
C3 |
H3A |
1.100 |
1.090 |
C6 |
H6 |
1.100 |
1.089 |
C6 |
H6A |
1.100 |
1.090 |
C8 |
H8 |
1.080 |
1.080 |
C9 |
H9 |
1.080 |
1.080 |
C11 |
H11 |
1.079 |
1.079 |
C12 |
H12 |
1.080 |
1.080 |
C13 |
H13 |
1.080 |
1.081 |
C14 |
H14 |
1.080 |
1.080 |
Bond Angles for TIC
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
N1 |
C1 |
C3 |
110.4 |
109.1 |
C1 |
N1 |
C2 |
111.7 |
111.3 |
C1 |
N1 |
C6 |
116.8 |
111.0 |
N1 |
C1 |
H1 |
109.1 |
109.5 |
N1 |
C1 |
H1A |
109.2 |
109.5 |
C1 |
C3 |
C5 |
103.9 |
108.1 |
C3 |
C1 |
H1 |
109.2 |
109.5 |
C3 |
C1 |
H1A |
109.1 |
109.5 |
C1 |
C3 |
H3 |
111.4 |
109.7 |
C1 |
C3 |
H3A |
111.4 |
109.8 |
C2 |
N1 |
C6 |
121.6 |
111.0 |
N1 |
C2 |
C4 |
106.1 |
108.6 |
N1 |
C2 |
H2 |
110.6 |
109.6 |
N1 |
C2 |
H2A |
110.6 |
109.6 |
N1 |
C6 |
C7 |
111.1 |
109.5 |
N1 |
C6 |
H6 |
108.9 |
109.5 |
N1 |
C6 |
H6A |
108.9 |
109.4 |
C5 |
S1 |
C9 |
92.0 |
91.0 |
S1 |
C5 |
C3 |
120.3 |
126.0 |
S1 |
C5 |
C4 |
112.5 |
110.0 |
S1 |
C9 |
C8 |
113.0 |
109.6 |
S1 |
C9 |
H9 |
123.5 |
125.2 |
CL1 |
C10 |
C7 |
123.6 |
120.0 |
CL1 |
C10 |
C12 |
113.7 |
120.0 |
C2 |
C4 |
C5 |
123.9 |
122.1 |
C2 |
C4 |
C8 |
123.9 |
124.2 |
C4 |
C2 |
H2 |
110.6 |
109.6 |
C4 |
C2 |
H2A |
110.6 |
109.6 |
C3 |
C5 |
C4 |
127.0 |
124.0 |
C5 |
C3 |
H3 |
111.4 |
109.7 |
C5 |
C3 |
H3A |
111.4 |
109.7 |
C5 |
C4 |
C8 |
112.0 |
113.7 |
C4 |
C8 |
C9 |
110.5 |
115.6 |
C4 |
C8 |
H8 |
124.8 |
122.2 |
C6 |
C7 |
C10 |
121.0 |
120.0 |
C6 |
C7 |
C11 |
120.9 |
120.0 |
C7 |
C6 |
H6 |
108.9 |
109.5 |
C7 |
C6 |
H6A |
108.9 |
109.5 |
C10 |
C7 |
C11 |
117.8 |
120.0 |
C7 |
C10 |
C12 |
122.6 |
119.9 |
C7 |
C11 |
C13 |
119.7 |
120.0 |
C7 |
C11 |
H11 |
120.2 |
120.0 |
C9 |
C8 |
H8 |
124.8 |
122.2 |
C8 |
C9 |
H9 |
123.5 |
125.2 |
C10 |
C12 |
C14 |
118.8 |
120.0 |
C10 |
C12 |
H12 |
120.6 |
120.0 |
C11 |
C13 |
C14 |
121.3 |
120.1 |
C13 |
C11 |
H11 |
120.1 |
120.0 |
C11 |
C13 |
H13 |
119.3 |
119.9 |
C12 |
C14 |
C13 |
119.7 |
120.0 |
C14 |
C12 |
H12 |
120.6 |
120.0 |
C12 |
C14 |
H14 |
120.1 |
120.0 |
C14 |
C13 |
H13 |
119.4 |
120.0 |
C13 |
C14 |
H14 |
120.2 |
120.0 |
H1 |
C1 |
H1A |
109.8 |
109.6 |
H2 |
C2 |
H2A |
108.3 |
109.8 |
H3 |
C3 |
H3A |
107.5 |
109.8 |
H6 |
C6 |
H6A |
110.0 |
109.5 |
Torsion Angles for TIC
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
N1 |
C1 |
C3 |
C5 |
49.3 |
311.2 |
C3 |
C1 |
N1 |
H1 |
240.0 |
240.1 |
C3 |
C1 |
N1 |
H1A |
120.0 |
119.9 |
N1 |
C1 |
C3 |
H3 |
169.3 |
70.7 |
N1 |
C1 |
C3 |
H3A |
289.3 |
191.5 |
C2 |
N1 |
C1 |
C6 |
213.6 |
235.9 |
C1 |
N1 |
C2 |
C4 |
47.9 |
307.3 |
C1 |
N1 |
C2 |
H2 |
167.8 |
67.1 |
C1 |
N1 |
C2 |
H2A |
287.8 |
187.6 |
C1 |
N1 |
C6 |
C7 |
42.9 |
170.0 |
C1 |
N1 |
C6 |
H6 |
162.9 |
290.0 |
C1 |
N1 |
C6 |
H6A |
282.9 |
50.0 |
H1 |
C1 |
N1 |
H1A |
240.0 |
239.8 |
C3 |
C1 |
N1 |
C2 |
286.1 |
71.9 |
C3 |
C1 |
N1 |
C6 |
72.5 |
196.0 |
N1 |
C1 |
C3 |
H1 |
120.0 |
119.9 |
N1 |
C1 |
C3 |
H1A |
240.0 |
240.1 |
S1 |
C5 |
C3 |
C1 |
162.8 |
195.6 |
C1 |
C3 |
C5 |
C4 |
348.5 |
15.5 |
C5 |
C3 |
C1 |
H3 |
240.0 |
240.4 |
C5 |
C3 |
C1 |
H3A |
120.0 |
119.7 |
H1 |
C1 |
C3 |
H1A |
120.0 |
120.2 |
H3 |
C3 |
C1 |
H3A |
240.0 |
239.2 |
C2 |
N1 |
C1 |
C3 |
286.1 |
71.9 |
C1 |
N1 |
C2 |
C6 |
144.5 |
124.2 |
C2 |
N1 |
C1 |
H1 |
46.1 |
191.8 |
C2 |
N1 |
C1 |
H1A |
166.1 |
312.0 |
C2 |
N1 |
C6 |
C7 |
185.8 |
294.3 |
C2 |
N1 |
C6 |
H6 |
305.8 |
54.3 |
C2 |
N1 |
C6 |
H6A |
65.8 |
174.3 |
N1 |
C2 |
C4 |
C5 |
350.9 |
17.4 |
N1 |
C2 |
C4 |
C8 |
165.0 |
197.4 |
C4 |
C2 |
N1 |
H2 |
240.0 |
240.3 |
C4 |
C2 |
N1 |
H2A |
120.0 |
119.7 |
H2 |
C2 |
N1 |
H2A |
240.0 |
239.5 |
C6 |
N1 |
C1 |
C3 |
72.5 |
196.0 |
C1 |
N1 |
C6 |
C2 |
217.1 |
235.7 |
C6 |
N1 |
C1 |
H1 |
192.5 |
315.9 |
C6 |
N1 |
C1 |
H1A |
312.5 |
76.1 |
C6 |
N1 |
C2 |
C4 |
263.3 |
183.2 |
C6 |
N1 |
C2 |
H2 |
23.3 |
302.9 |
C6 |
N1 |
C2 |
H2A |
143.3 |
63.5 |
N1 |
C6 |
C7 |
C10 |
74.2 |
80.0 |
N1 |
C6 |
C7 |
C11 |
260.9 |
259.8 |
C7 |
C6 |
N1 |
H6 |
240.0 |
240.0 |
C7 |
C6 |
N1 |
H6A |
120.0 |
120.0 |
H6 |
C6 |
N1 |
H6A |
240.0 |
240.0 |
C1 |
C3 |
C5 |
S1 |
162.8 |
195.6 |
C5 |
S1 |
C9 |
C8 |
359.3 |
359.9 |
C5 |
S1 |
C9 |
H9 |
179.3 |
180.0 |
C2 |
C4 |
C5 |
S1 |
176.1 |
180.0 |
C3 |
C5 |
S1 |
C4 |
184.9 |
179.9 |
S1 |
C5 |
C3 |
H3 |
42.9 |
76.0 |
S1 |
C5 |
C3 |
H3A |
282.8 |
315.3 |
S1 |
C5 |
C4 |
C8 |
1.4 |
359.9 |
C9 |
S1 |
C5 |
C3 |
184.4 |
180.0 |
C9 |
S1 |
C5 |
C4 |
359.6 |
0.1 |
C4 |
C8 |
C9 |
S1 |
1.5 |
0.1 |
S1 |
C9 |
C8 |
H8 |
181.5 |
180.1 |
C8 |
C9 |
S1 |
H9 |
180.0 |
179.9 |
C6 |
C7 |
C10 |
CL1 |
8.1 |
360.0 |
CL1 |
C10 |
C7 |
C11 |
181.6 |
180.2 |
C7 |
C10 |
CL1 |
C12 |
175.6 |
180.0 |
CL1 |
C10 |
C12 |
C14 |
176.3 |
180.1 |
CL1 |
C10 |
C12 |
H12 |
356.3 |
359.9 |
C4 |
C2 |
N1 |
C6 |
263.3 |
183.2 |
N1 |
C2 |
C4 |
H2 |
120.0 |
119.8 |
N1 |
C2 |
C4 |
H2A |
240.0 |
240.3 |
S1 |
C5 |
C4 |
C2 |
176.1 |
180.0 |
C3 |
C5 |
C4 |
C2 |
350.9 |
0.1 |
C5 |
C4 |
C2 |
C8 |
185.9 |
179.9 |
C2 |
C4 |
C8 |
C9 |
183.4 |
179.9 |
C2 |
C4 |
C8 |
H8 |
3.4 |
359.8 |
H2 |
C2 |
C4 |
H2A |
120.0 |
120.5 |
C5 |
C3 |
C1 |
H1 |
289.3 |
191.3 |
C5 |
C3 |
C1 |
H1A |
169.3 |
71.1 |
C1 |
C3 |
C5 |
H3 |
120.0 |
119.6 |
C1 |
C3 |
C5 |
H3A |
240.0 |
240.3 |
C3 |
C5 |
S1 |
C9 |
184.4 |
180.0 |
S1 |
C5 |
C3 |
C4 |
174.4 |
180.1 |
C2 |
C4 |
C5 |
C3 |
350.9 |
0.1 |
C3 |
C5 |
C4 |
C8 |
176.1 |
180.0 |
H3 |
C3 |
C5 |
H3A |
120.0 |
120.7 |
C4 |
C5 |
S1 |
C9 |
359.6 |
0.1 |
S1 |
C5 |
C4 |
C3 |
185.3 |
179.9 |
C2 |
C4 |
C5 |
C8 |
174.7 |
180.1 |
C5 |
C4 |
C2 |
H2 |
230.9 |
257.6 |
C5 |
C4 |
C2 |
H2A |
110.9 |
137.1 |
C4 |
C5 |
C3 |
H3 |
228.5 |
255.9 |
C4 |
C5 |
C3 |
H3A |
108.5 |
135.2 |
C5 |
C4 |
C8 |
C9 |
358.1 |
360.0 |
C5 |
C4 |
C8 |
H8 |
178.2 |
179.9 |
S1 |
C9 |
C8 |
C4 |
1.5 |
0.1 |
C2 |
C4 |
C8 |
C5 |
185.3 |
179.9 |
C8 |
C4 |
C2 |
H2 |
45.0 |
77.7 |
C8 |
C4 |
C2 |
H2A |
285.0 |
317.1 |
C9 |
C8 |
C4 |
H8 |
180.0 |
180.1 |
C4 |
C8 |
C9 |
H9 |
181.5 |
180.0 |
N1 |
C6 |
C7 |
H6 |
120.0 |
120.0 |
N1 |
C6 |
C7 |
H6A |
240.0 |
240.0 |
CL1 |
C10 |
C7 |
C6 |
8.1 |
360.0 |
C10 |
C7 |
C6 |
C11 |
173.3 |
180.2 |
C6 |
C7 |
C10 |
C12 |
183.3 |
180.0 |
C6 |
C7 |
C11 |
C13 |
175.8 |
180.0 |
C6 |
C7 |
C11 |
H11 |
355.8 |
360.0 |
H6 |
C6 |
C7 |
H6A |
120.0 |
120.0 |
CL1 |
C10 |
C7 |
C12 |
184.7 |
180.0 |
C6 |
C7 |
C10 |
C11 |
186.5 |
179.8 |
C10 |
C7 |
C6 |
H6 |
314.2 |
320.0 |
C10 |
C7 |
C6 |
H6A |
194.2 |
200.0 |
C10 |
C7 |
C11 |
C13 |
2.3 |
359.8 |
C10 |
C7 |
C11 |
H11 |
182.3 |
179.7 |
C7 |
C10 |
C12 |
C14 |
0.6 |
0.1 |
C7 |
C10 |
C12 |
H12 |
180.6 |
179.9 |
C6 |
C7 |
C11 |
C10 |
173.5 |
180.2 |
C11 |
C7 |
C6 |
H6 |
140.9 |
139.8 |
C11 |
C7 |
C6 |
H6A |
20.9 |
19.8 |
C11 |
C7 |
C10 |
C12 |
356.8 |
0.2 |
C7 |
C11 |
C13 |
C14 |
1.1 |
359.9 |
C13 |
C11 |
C7 |
H11 |
180.0 |
180.1 |
C7 |
C11 |
C13 |
H13 |
181.1 |
179.9 |
S1 |
C9 |
C8 |
H9 |
180.0 |
180.1 |
C4 |
C8 |
C9 |
H8 |
180.0 |
179.9 |
CL1 |
C10 |
C12 |
C7 |
175.7 |
180.0 |
C12 |
C10 |
C7 |
C11 |
356.8 |
0.2 |
C10 |
C12 |
C14 |
C13 |
2.8 |
359.6 |
C14 |
C12 |
C10 |
H12 |
180.0 |
180.1 |
C10 |
C12 |
C14 |
H14 |
182.8 |
180.0 |
C7 |
C11 |
C13 |
H11 |
180.0 |
179.9 |
C12 |
C14 |
C13 |
C11 |
356.3 |
0.4 |
C14 |
C13 |
C11 |
H13 |
180.0 |
180.0 |
C11 |
C13 |
C14 |
H14 |
176.3 |
180.0 |
C10 |
C12 |
C14 |
H12 |
180.0 |
179.9 |
C11 |
C13 |
C14 |
C12 |
356.3 |
0.4 |
C12 |
C14 |
C13 |
H13 |
176.3 |
180.4 |
C13 |
C14 |
C12 |
H14 |
180.0 |
179.6 |
C14 |
C13 |
C11 |
H11 |
181.1 |
180.0 |
C11 |
C13 |
C14 |
H13 |
180.0 |
180.0 |
C13 |
C14 |
C12 |
H12 |
182.8 |
179.8 |
C12 |
C14 |
C13 |
H14 |
180.0 |
180.4 |
N1 |
C1 |
H1 |
C3 |
239.2 |
240.3 |
H1 |
C1 |
N1 |
C2 |
46.1 |
191.8 |
H1 |
C1 |
N1 |
C6 |
192.5 |
315.9 |
N1 |
C1 |
H1 |
H1A |
119.6 |
120.2 |
H1 |
C1 |
C3 |
C5 |
289.3 |
191.3 |
C3 |
C1 |
H1 |
H1A |
240.4 |
239.9 |
H1 |
C1 |
C3 |
H3 |
49.3 |
310.8 |
H1 |
C1 |
C3 |
H3A |
169.3 |
71.6 |
N1 |
C1 |
H1A |
C3 |
120.8 |
119.7 |
H1A |
C1 |
N1 |
C2 |
166.1 |
312.0 |
H1A |
C1 |
N1 |
C6 |
312.5 |
76.1 |
N1 |
C1 |
H1A |
H1 |
240.4 |
239.8 |
H1A |
C1 |
C3 |
C5 |
169.3 |
71.1 |
C3 |
C1 |
H1A |
H1 |
119.6 |
120.1 |
H1A |
C1 |
C3 |
H3 |
289.3 |
190.7 |
H1A |
C1 |
C3 |
H3A |
49.3 |
311.4 |
H2 |
C2 |
N1 |
C6 |
23.3 |
302.9 |
N1 |
C2 |
H2 |
C4 |
242.7 |
240.9 |
N1 |
C2 |
H2 |
H2A |
121.4 |
120.4 |
H2 |
C2 |
C4 |
C5 |
230.9 |
257.6 |
H2 |
C2 |
C4 |
C8 |
45.0 |
77.7 |
C4 |
C2 |
H2 |
H2A |
238.6 |
239.6 |
H2A |
C2 |
N1 |
C6 |
143.3 |
63.5 |
N1 |
C2 |
H2A |
C4 |
117.3 |
119.1 |
N1 |
C2 |
H2A |
H2 |
238.6 |
239.5 |
H2A |
C2 |
C4 |
C5 |
110.9 |
137.1 |
H2A |
C2 |
C4 |
C8 |
285.0 |
317.1 |
C4 |
C2 |
H2A |
H2 |
121.3 |
120.4 |
C1 |
C3 |
H3 |
C5 |
244.5 |
241.4 |
H3 |
C3 |
C1 |
H1 |
49.3 |
310.8 |
H3 |
C3 |
C1 |
H1A |
289.3 |
190.7 |
C1 |
C3 |
H3 |
H3A |
122.3 |
120.8 |
H3 |
C3 |
C5 |
C4 |
228.5 |
255.9 |
C5 |
C3 |
H3 |
H3A |
237.7 |
239.3 |
C1 |
C3 |
H3A |
C5 |
115.5 |
118.6 |
H3A |
C3 |
C1 |
H1 |
169.3 |
71.6 |
H3A |
C3 |
C1 |
H1A |
49.3 |
311.4 |
C1 |
C3 |
H3A |
H3 |
237.7 |
239.3 |
H3A |
C3 |
C5 |
C4 |
108.5 |
135.2 |
C5 |
C3 |
H3A |
H3 |
122.3 |
120.6 |
N1 |
C6 |
H6 |
C7 |
238.7 |
240.0 |
N1 |
C6 |
H6 |
H6A |
119.3 |
120.0 |
H6 |
C6 |
C7 |
C10 |
314.2 |
320.0 |
H6 |
C6 |
C7 |
C11 |
140.9 |
139.8 |
C7 |
C6 |
H6 |
H6A |
240.7 |
240.0 |
N1 |
C6 |
H6A |
C7 |
121.3 |
120.0 |
N1 |
C6 |
H6A |
H6 |
240.6 |
240.0 |
H6A |
C6 |
C7 |
C10 |
194.2 |
200.0 |
H6A |
C6 |
C7 |
C11 |
20.9 |
19.8 |
C7 |
C6 |
H6A |
H6 |
119.3 |
120.0 |
C4 |
C8 |
H8 |
C9 |
180.0 |
180.1 |
H8 |
C8 |
C9 |
H9 |
1.5 |
0.0 |
S1 |
C9 |
H9 |
C8 |
180.0 |
179.9 |
H9 |
C9 |
C8 |
H8 |
1.5 |
0.0 |
C7 |
C11 |
H11 |
C13 |
180.0 |
180.1 |
H11 |
C11 |
C13 |
C14 |
181.1 |
180.0 |
H11 |
C11 |
C13 |
H13 |
1.1 |
360.0 |
C10 |
C12 |
H12 |
C14 |
180.0 |
180.1 |
H12 |
C12 |
C14 |
C13 |
182.8 |
179.8 |
H12 |
C12 |
C14 |
H14 |
2.8 |
0.2 |
C11 |
C13 |
H13 |
C14 |
180.0 |
180.0 |
H13 |
C13 |
C11 |
H11 |
1.1 |
360.0 |
H13 |
C13 |
C14 |
H14 |
356.3 |
360.0 |
C12 |
C14 |
H14 |
C13 |
180.0 |
179.6 |
H14 |
C14 |
C12 |
H12 |
2.8 |
0.2 |
H14 |
C14 |
C13 |
H13 |
356.3 |
360.0 |