PDB Chemical Component THH

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for THH

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
OE1 CD 1.265 1.342
OE1 HE1 0.950 0.968
CD OE2 1.261 1.207
CD CG 1.521 1.507
CG CB 1.522 1.529
CG HG1 1.115 1.090
CG HG2 1.114 1.091
CB CA 1.512 1.529
CB HB1 1.115 1.090
CB HB2 1.115 1.090
CA CT 1.498 1.507
CA N 1.444 1.466
CA HA 1.116 1.089
CT O1 1.248 1.208
CT O2 1.249 1.342
O2 HO2 0.950 0.967
N C 1.341 1.347
N HN 1.020 0.969
C O 1.228 1.216
C C12 1.521 1.475
C12 C13 1.422 1.398
C12 C17 1.402 1.399
C13 C14 1.437 1.376
C13 H13 1.103 1.080
C14 C15 1.405 1.392
C14 H14 1.104 1.080
C15 C16 1.402 1.392
C15 N10 1.327 1.390
C16 C17 1.402 1.376
C16 H16 1.103 1.078
C17 H17 1.103 1.079
N10 C9 1.471 1.465
N10 H10 1.021 0.970
C9 C6 1.529 1.530
C9 H91 1.115 1.089
C9 H92 1.115 1.089
C6 C7 1.509 1.536
C6 N5 1.486 1.462
C6 H6 1.115 1.090
C7 N8 1.454 1.475
C7 H71 1.115 1.089
C7 H72 1.115 1.089
N8 C8A 1.349 1.393
N8 HN8 1.020 0.969
C8A N1 1.369 1.330
C8A C4A 1.507 1.389
N1 C2 1.329 1.324
C4A N5 1.412 1.401
C4A C4 1.482 1.398
N5 C11 1.442 1.468
C11 H111 1.115 1.090
C11 H112 1.115 1.091
C11 H113 1.115 1.089
C4 O4 1.321 1.356
C4 N3 1.382 1.328
O4 HO4 0.950 0.967
N3 C2 1.377 1.324
C2 NA2 1.351 1.387
NA2 HA21 1.020 0.970
NA2 HA22 1.020 0.969

Bond Angles for THH

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CD OE1 HE1 120.7 120.0
OE1 CD OE2 120.8 120.0
OE1 CD CG 114.6 119.9
OE2 CD CG 124.7 120.0
CD CG CB 110.0 109.5
CD CG HG1 112.0 109.5
CD CG HG2 112.0 109.5
CB CG HG1 112.0 109.5
CB CG HG2 112.0 109.4
CG CB CA 110.8 109.5
CG CB HB1 111.7 109.5
CG CB HB2 111.7 109.5
HG1 CG HG2 98.4 109.5
CA CB HB1 111.8 109.4
CA CB HB2 111.7 109.4
CB CA CT 115.4 109.5
CB CA N 109.2 109.5
CB CA HA 105.5 109.5
HB1 CB HB2 98.7 109.5
CT CA N 109.3 109.5
CT CA HA 105.3 109.4
CA CT O1 121.2 120.0
CA CT O2 115.1 120.0
N CA HA 112.1 109.5
CA N C 121.8 120.0
CA N HN 122.9 120.0
O1 CT O2 123.7 120.0
CT O2 HO2 115.1 120.0
C N HN 115.3 120.0
N C O 128.0 120.0
N C C12 115.3 120.0
O C C12 116.6 120.0
C C12 C13 126.1 120.1
C C12 C17 121.3 120.1
C13 C12 C17 112.6 119.8
C12 C13 C14 125.0 119.9
C12 C13 H13 116.9 120.0
C12 C17 C16 122.6 120.0
C12 C17 H17 118.7 120.0
C14 C13 H13 118.1 120.0
C13 C14 C15 120.4 120.0
C13 C14 H14 120.9 120.0
C15 C14 H14 118.7 120.0
C14 C15 C16 114.2 120.2
C14 C15 N10 130.7 119.9
C16 C15 N10 115.1 119.9
C15 C16 C17 125.2 120.0
C15 C16 H16 117.4 120.0
C15 N10 C9 123.2 120.0
C15 N10 H10 107.3 120.0
C17 C16 H16 117.4 120.0
C16 C17 H17 118.7 120.0
C9 N10 H10 107.3 120.0
N10 C9 C6 105.6 109.5
N10 C9 H91 113.7 109.4
N10 C9 H92 113.7 109.5
C6 C9 H91 113.7 109.5
C6 C9 H92 113.7 109.5
C9 C6 C7 121.3 109.5
C9 C6 N5 113.0 109.5
C9 C6 H6 97.7 109.5
H91 C9 H92 96.8 109.5
C7 C6 N5 111.7 109.4
C7 C6 H6 99.5 109.5
C6 C7 N8 110.2 106.9
C6 C7 H71 111.9 110.0
C6 C7 H72 112.0 109.9
N5 C6 H6 111.2 109.5
C6 N5 C4A 118.3 109.7
C6 N5 C11 125.4 106.7
N8 C7 H71 111.9 110.0
N8 C7 H72 111.9 110.0
C7 N8 C8A 124.6 117.0
C7 N8 HN8 106.9 121.4
H71 C7 H72 98.4 110.0
C8A N8 HN8 106.9 121.5
N8 C8A N1 113.7 119.7
N8 C8A C4A 119.2 120.6
N1 C8A C4A 127.1 119.7
C8A N1 C2 118.6 120.6
C8A C4A N5 116.6 123.1
C8A C4A C4 111.5 117.9
N1 C2 N3 117.3 121.6
N1 C2 NA2 123.0 119.2
N5 C4A C4 131.9 119.1
C4A N5 C11 116.2 106.7
C4A C4 O4 131.4 120.4
C4A C4 N3 114.7 119.1
N5 C11 H111 106.6 109.5
N5 C11 H112 125.4 109.5
N5 C11 H113 106.6 109.6
H111 C11 H112 106.6 109.4
H111 C11 H113 103.0 109.5
H112 C11 H113 106.6 109.4
O4 C4 N3 113.9 120.5
C4 O4 HO4 131.4 106.8
C4 N3 C2 130.7 121.1
N3 C2 NA2 119.6 119.2
C2 NA2 HA21 107.4 120.0
C2 NA2 HA22 123.0 120.1
HA21 NA2 HA22 107.4 120.0

Torsion Angles for THH

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
OE2 CD OE1 CG 180.6 179.9
OE1 CD CG CB 65.4 180.0
OE1 CD CG HG1 300.2 60.0
OE1 CD CG HG2 190.7 299.9
HE1 OE1 CD OE2 180.0 360.0
HE1 OE1 CD CG 359.4 180.0
OE2 CD OE1 HE1 180.0 360.0
OE1 CD OE2 CG 179.4 180.1
OE2 CD CG CB 244.8 0.0
OE2 CD CG HG1 119.6 240.0
OE2 CD CG HG2 10.1 120.0
CG CD OE1 HE1 359.4 180.0
OE1 CD CG OE2 180.6 179.9
CB CG CD HG1 125.2 120.0
CB CG CD HG2 234.7 240.1
CD CG CB CA 171.9 180.0
CD CG CB HB1 46.6 60.0
CD CG CB HB2 297.1 300.0
HG1 CG CD HG2 109.5 120.1
CD CG CB HG1 234.7 240.0
CD CG CB HG2 125.3 120.0
HG1 CG CB HG2 250.5 240.0
CA CB CG HB1 125.3 120.0
CA CB CG HB2 234.8 240.0
CG CB CA CT 158.9 180.0
CG CB CA N 282.5 300.0
CG CB CA HA 43.1 60.0
HB1 CB CG HB2 109.5 120.0
CD CG HG1 CB 124.2 120.0
CD CG HG1 HG2 242.1 240.0
CB CG HG1 HG2 117.9 119.9
HG1 CG CB CA 297.2 300.0
HG1 CG CB HB1 171.9 180.0
HG1 CG CB HB2 62.4 60.0
CD CG HG2 CB 235.8 240.0
CD CG HG2 HG1 117.9 120.1
CB CG HG2 HG1 242.1 240.0
HG2 CG CB CA 46.6 60.0
HG2 CG CB HB1 281.4 300.0
HG2 CG CB HB2 171.9 180.0
CA CB CG HG1 297.2 300.0
CA CB CG HG2 46.6 60.0
CG CB CA HB1 234.8 240.0
CG CB CA HB2 125.3 120.0
HB1 CB CA HB2 250.5 240.1
CT CA CB N 236.4 240.0
CT CA CB HA 115.8 120.0
CB CA CT O1 75.9 270.0
CB CA CT O2 254.9 90.0
N CA CB HA 239.4 240.0
CB CA N C 122.9 150.0
CB CA N HN 302.9 330.0
HB1 CB CG HG1 171.9 180.0
HB1 CB CG HG2 281.4 300.0
CG CB HB1 CA 124.7 120.0
CG CB HB1 HB2 242.3 240.0
CA CB HB1 HB2 117.6 119.9
HB1 CB CA CT 284.1 300.0
HB1 CB CA N 47.7 60.0
HB1 CB CA HA 168.3 180.0
HB2 CB CG HG1 62.4 60.0
HB2 CB CG HG2 171.9 180.0
CG CB HB2 CA 235.3 240.0
CG CB HB2 HB1 117.6 120.0
CA CB HB2 HB1 242.3 240.1
HB2 CB CA CT 33.6 60.0
HB2 CB CA N 157.2 180.0
HB2 CB CA HA 277.8 300.0
CT CA CB HB1 284.1 300.0
CT CA CB HB2 33.6 60.0
CB CA CT N 123.5 120.0
CB CA CT HA 244.1 240.0
N CA CT HA 120.6 120.0
CT CA N C 250.0 270.0
CT CA N HN 70.0 90.0
O1 CT CA O2 181.0 180.0
CA CT O2 HO2 180.0 180.0
N CA CB HB1 47.7 60.0
N CA CB HB2 157.2 180.0
CB CA N CT 232.9 240.0
CB CA N HA 116.5 120.0
CT CA N HA 243.6 240.0
N CA CT O1 312.4 150.0
N CA CT O2 131.4 330.0
C N CA HN 180.0 180.1
CA N C O 359.8 360.0
CA N C C12 178.9 180.0
HA CA CB HB1 168.3 180.0
HA CA CB HB2 277.8 300.0
CB CA HA CT 122.5 120.0
CB CA HA N 241.3 240.0
CT CA HA N 118.8 120.0
HA CA CT O1 191.8 30.0
HA CA CT O2 10.8 210.0
HA CA N C 6.3 30.0
HA CA N HN 186.3 209.9
O1 CT CA N 312.4 150.0
O1 CT CA HA 191.8 30.0
CA CT O1 O2 178.9 180.0
O1 CT O2 HO2 359.0 0.0
O2 CT CA N 131.4 330.0
O2 CT CA HA 10.8 210.0
CA CT O2 O1 181.0 180.0
C N CA HA 6.3 30.0
CA N C HN 180.0 179.9
O C N C12 180.9 180.0
N C C12 C13 324.9 180.0
N C C12 C17 145.6 360.0
HN N CA HA 186.3 209.9
CA N HN C 180.0 180.1
HN N C O 179.8 180.0
HN N C C12 358.9 0.1
O C N HN 179.8 180.0
N C O C12 179.1 180.0
O C C12 C13 144.2 0.0
O C C12 C17 324.8 180.0
C12 C N HN 358.9 0.1
N C C12 O 180.8 180.0
C13 C12 C C17 179.4 180.0
C C12 C13 C14 180.7 179.9
C C12 C13 H13 0.7 360.0
C C12 C17 C16 179.3 179.8
C C12 C17 H17 359.3 359.9
C C12 C13 C17 180.6 180.0
C13 C12 C17 C16 359.8 359.8
C13 C12 C17 H17 179.8 179.9
C14 C13 C12 H13 180.0 180.0
C12 C13 C14 C15 0.1 0.0
C12 C13 C14 H14 180.1 180.0
C C12 C17 C13 179.4 180.0
C17 C12 C13 C14 0.1 359.9
C17 C12 C13 H13 180.1 180.0
C15 C16 C17 C12 0.0 0.5
C12 C17 C16 H16 180.0 179.9
C16 C17 C12 H17 180.0 179.8
C14 C13 C12 C17 0.1 359.9
C12 C13 C14 H13 180.0 180.0
C15 C14 C13 H14 180.0 180.0
C13 C14 C15 C16 359.8 0.3
C13 C14 C15 N10 179.4 179.9
H13 C13 C12 C17 180.1 180.0
C12 C13 H13 C14 180.0 180.0
H13 C13 C14 C15 180.0 180.0
H13 C13 C14 H14 0.0 360.0
C15 C14 C13 H13 180.0 180.0
C13 C14 C15 H14 180.0 180.0
C16 C15 C14 N10 180.5 180.3
C14 C15 C16 C17 0.1 359.5
C14 C15 C16 H16 180.1 180.0
C14 C15 N10 C9 89.3 180.0
C14 C15 N10 H10 324.0 0.1
H14 C14 C13 H13 0.0 360.0
C13 C14 H14 C15 180.0 180.0
H14 C14 C15 C16 179.8 180.3
H14 C14 C15 N10 359.4 360.0
C12 C17 C16 C15 0.0 0.5
C16 C15 C14 H14 179.8 180.3
C14 C15 C16 N10 179.6 179.7
C16 C15 N10 C9 268.9 359.6
C16 C15 N10 H10 143.6 179.8
C17 C16 C15 H16 180.0 179.4
C15 C16 C17 H17 180.1 180.3
N10 C15 C14 H14 359.4 360.0
C14 C15 N10 C16 180.5 180.3
N10 C15 C16 C17 180.5 179.8
N10 C15 C16 H16 0.5 0.4
C9 N10 C15 H10 125.3 179.9
C15 N10 C9 C6 146.3 185.0
C15 N10 C9 H91 21.0 65.0
C15 N10 C9 H92 271.6 305.0
C12 C17 C16 H17 180.0 180.2
C17 C16 C15 N10 180.5 179.8
C15 C16 C17 H16 180.0 180.6
H16 C16 C15 N10 0.5 0.4
C15 C16 H16 C17 180.0 179.4
H16 C16 C17 H17 0.1 359.8
C12 C17 H17 C16 180.0 179.8
H17 C17 C16 H16 0.1 359.8
C15 N10 C9 H10 234.7 180.1
C6 C9 N10 H91 125.3 120.0
C6 C9 N10 H92 234.7 240.0
N10 C9 C6 C7 203.8 63.6
N10 C9 C6 N5 340.7 183.6
N10 C9 C6 H6 97.6 303.6
H91 C9 N10 H92 109.4 120.0
C15 N10 H10 C9 134.3 179.9
H10 N10 C9 C6 271.6 4.9
H10 N10 C9 H91 146.3 244.9
H10 N10 C9 H92 36.9 124.9
C6 C9 N10 H10 271.6 4.9
N10 C9 C6 H91 234.7 240.1
N10 C9 C6 H92 125.3 120.1
H91 C9 C6 H92 250.6 240.0
C7 C6 C9 N5 223.1 240.1
C7 C6 C9 H6 106.2 120.0
C9 C6 C7 N8 89.1 184.2
C9 C6 C7 H71 323.9 303.6
C9 C6 C7 H72 214.4 64.9
N5 C6 C9 H6 243.1 239.9
C9 C6 N5 C4A 265.7 183.0
C9 C6 N5 C11 88.8 67.8
H91 C9 N10 H10 146.3 244.9
N10 C9 H91 C6 120.8 120.0
N10 C9 H91 H92 240.4 240.0
C6 C9 H91 H92 119.6 120.0
H91 C9 C6 C7 329.1 183.6
H91 C9 C6 N5 106.0 303.5
H91 C9 C6 H6 222.9 63.5
H92 C9 N10 H10 36.9 124.9
N10 C9 H92 C6 239.2 240.0
N10 C9 H92 H91 119.6 119.9
C6 C9 H92 H91 240.4 240.0
H92 C9 C6 C7 78.5 303.6
H92 C9 C6 N5 215.4 63.5
H92 C9 C6 H6 332.3 183.6
C7 C6 C9 H91 329.1 183.6
C7 C6 C9 H92 78.5 303.6
C9 C6 C7 N5 137.4 120.0
C9 C6 C7 H6 254.8 240.0
N5 C6 C7 H6 117.5 120.0
C7 C6 N5 C4A 46.8 303.0
C7 C6 N5 C11 229.8 187.8
N8 C7 C6 H71 125.3 240.6
N8 C7 C6 H72 234.7 119.3
C6 C7 N8 C8A 30.0 320.8
C6 C7 N8 HN8 264.7 140.8
H71 C7 C6 H72 109.4 238.7
N5 C6 C9 H91 106.0 303.5
N5 C6 C9 H92 215.4 63.5
C9 C6 N5 C7 218.9 240.0
C9 C6 N5 H6 108.7 120.1
C7 C6 N5 H6 249.8 240.0
N5 C6 C7 N8 311.7 64.2
N5 C6 C7 H71 186.5 183.5
N5 C6 C7 H72 77.0 304.9
C8A C4A N5 C6 338.5 25.7
C6 N5 C4A C4 159.0 205.4
C4A N5 C6 C11 176.9 115.2
C6 N5 C11 H111 54.7 320.3
C6 N5 C11 H112 180.0 80.3
C6 N5 C11 H113 305.3 200.3
H6 C6 C9 H91 222.9 63.5
H6 C6 C9 H92 332.3 183.6
C9 C6 H6 C7 123.7 120.0
C9 C6 H6 N5 241.6 239.9
C7 C6 H6 N5 117.9 119.9
H6 C6 C7 N8 194.3 304.2
H6 C6 C7 H71 69.0 63.6
H6 C6 C7 H72 319.6 184.9
H6 C6 N5 C4A 157.0 63.0
H6 C6 N5 C11 340.1 307.7
N8 C7 C6 N5 311.7 64.2
N8 C7 C6 H6 194.3 304.2
C6 C7 N8 H71 234.7 119.4
C6 C7 N8 H72 125.3 240.7
H71 C7 N8 H72 250.6 121.3
C8A N8 C7 HN8 125.2 179.9
C7 N8 C8A N1 175.0 189.0
C7 N8 C8A C4A 354.8 9.1
H71 C7 C6 N5 186.5 183.5
H71 C7 C6 H6 69.0 63.6
C6 C7 H71 N8 124.3 242.6
C6 C7 H71 H72 242.1 121.3
N8 C7 H71 H72 117.8 238.7
H71 C7 N8 C8A 155.2 201.4
H71 C7 N8 HN8 30.0 21.5
H72 C7 C6 N5 77.0 304.9
H72 C7 C6 H6 319.6 184.9
C6 C7 H72 N8 235.7 117.4
C6 C7 H72 H71 117.8 238.7
N8 C7 H72 H71 242.2 121.3
H72 C7 N8 C8A 264.7 80.1
H72 C7 N8 HN8 139.4 260.1
C8A N8 C7 H71 155.2 201.4
C8A N8 C7 H72 264.7 80.1
C7 N8 C8A HN8 234.7 180.1
N1 C8A N8 C4A 180.2 179.9
N8 C8A N1 C2 180.0 180.5
N8 C8A C4A N5 359.7 359.2
N8 C8A C4A C4 179.2 179.5
HN8 N8 C7 H71 30.0 21.5
HN8 N8 C7 H72 139.4 260.1
C7 N8 HN8 C8A 135.4 179.9
HN8 N8 C8A N1 300.2 8.9
HN8 N8 C8A C4A 120.1 189.1
N1 C8A N8 HN8 300.2 8.9
N8 C8A N1 C4A 179.8 180.1
N1 C8A C4A N5 179.5 179.3
N1 C8A C4A C4 359.1 359.6
C8A N1 C2 N3 0.5 359.9
C8A N1 C2 NA2 180.5 180.0
C6 N5 C4A C8A 338.5 25.7
C4A C8A N8 HN8 120.1 189.1
N8 C8A C4A N1 180.2 179.9
C4A C8A N1 C2 0.1 0.3
N5 C4A C8A C4 180.4 179.6
C8A C4A N5 C11 155.7 141.0
C8A C4A C4 O4 180.6 180.1
C8A C4A C4 N3 1.0 0.1
C2 N1 C8A C4A 0.1 0.3
C4 N3 C2 N1 359.6 359.9
N3 C2 N1 NA2 180.1 179.9
N1 C2 NA2 HA21 54.8 180.0
N1 C2 NA2 HA22 180.0 359.9
C4A N5 C6 H6 157.0 63.0
C6 N5 C4A C11 182.8 244.8
C8A C4A N5 C4 179.5 180.4
N5 C4A C4 O4 0.1 0.5
N5 C4A C4 N3 180.5 180.5
C4A N5 C11 H111 237.7 203.1
C4A N5 C11 H112 3.0 323.0
C4A N5 C11 H113 128.3 83.0
C8A C4A C4 N5 180.5 179.7
C4 C4A N5 C11 336.2 320.6
O4 C4 C4A N3 179.6 180.0
C4A C4 O4 HO4 180.0 270.0
C4A C4 N3 C2 359.5 0.1
C11 N5 C6 H6 340.1 307.7
C6 N5 C11 C4A 177.0 117.2
C11 N5 C4A C4 336.2 320.6
H111 C11 N5 H112 234.7 240.1
H111 C11 N5 H113 109.5 120.1
H112 C11 N5 H113 234.7 240.0
N5 C11 H111 H112 136.0 120.0
N5 C11 H111 H113 248.0 239.9
H112 C11 H111 H113 112.0 119.9
N5 C11 H112 H111 234.7 240.0
N5 C11 H112 H113 125.3 120.1
H111 C11 H112 H113 250.5 240.1
N5 C11 H113 H111 112.0 120.1
N5 C11 H113 H112 224.0 240.0
H111 C11 H113 H112 112.0 119.9
C4A C4 O4 N3 180.4 180.0
O4 C4 N3 C2 179.8 180.1
N1 C2 N3 C4 359.6 359.9
C4A C4 N3 O4 179.7 180.0
N3 C4 O4 HO4 359.7 90.0
C4 N3 C2 NA2 179.7 179.8
HO4 O4 C4 N3 359.7 90.0
N1 C2 N3 NA2 179.9 180.1
N3 C2 NA2 HA21 234.7 0.1
N3 C2 NA2 HA22 359.9 180.0
N1 C2 NA2 N3 180.1 179.9
HA21 NA2 C2 HA22 234.7 180.1
C2 NA2 HA21 HA22 134.2 179.9
C2 NA2 HA22 HA21 234.7 180.1