PDB Chemical Component THA
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for THA
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.389 |
1.361 |
C1 |
C6 |
1.388 |
1.392 |
C1 |
H1 |
1.102 |
1.080 |
C2 |
C3 |
1.395 |
1.406 |
C2 |
H2 |
1.102 |
1.080 |
C3 |
C4 |
1.444 |
1.415 |
C3 |
N7 |
1.313 |
1.334 |
C4 |
C5 |
1.412 |
1.401 |
C4 |
C10 |
1.420 |
1.413 |
C5 |
C6 |
1.389 |
1.363 |
C5 |
H5 |
1.103 |
1.080 |
C6 |
H6 |
1.103 |
1.080 |
N7 |
C8 |
1.314 |
1.322 |
C8 |
C9 |
1.421 |
1.383 |
C8 |
C11 |
1.549 |
1.509 |
C9 |
C10 |
1.417 |
1.391 |
C9 |
C14 |
1.572 |
1.506 |
C10 |
N15 |
1.349 |
1.386 |
C11 |
C12 |
1.549 |
1.526 |
C11 |
H111 |
1.115 |
1.089 |
C11 |
H112 |
1.115 |
1.090 |
C12 |
C13 |
1.540 |
1.532 |
C12 |
H121 |
1.115 |
1.090 |
C12 |
H122 |
1.115 |
1.090 |
C13 |
C14 |
1.549 |
1.527 |
C13 |
H131 |
1.116 |
1.089 |
C13 |
H132 |
1.116 |
1.090 |
C14 |
H141 |
1.116 |
1.090 |
C14 |
H142 |
1.115 |
1.089 |
N15 |
HN51 |
1.020 |
0.970 |
N15 |
HN52 |
1.019 |
0.970 |
Bond Angles for THA
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
120.6 |
121.1 |
C2 |
C1 |
H1 |
119.7 |
119.5 |
C1 |
C2 |
C3 |
120.3 |
119.8 |
C1 |
C2 |
H2 |
119.7 |
120.1 |
C6 |
C1 |
H1 |
119.7 |
119.5 |
C1 |
C6 |
C5 |
120.4 |
120.8 |
C1 |
C6 |
H6 |
119.8 |
119.6 |
C3 |
C2 |
H2 |
120.0 |
120.1 |
C2 |
C3 |
C4 |
119.9 |
119.0 |
C2 |
C3 |
N7 |
118.9 |
121.3 |
C4 |
C3 |
N7 |
121.2 |
119.7 |
C3 |
C4 |
C5 |
117.8 |
119.8 |
C3 |
C4 |
C10 |
117.5 |
118.6 |
C3 |
N7 |
C8 |
122.6 |
122.6 |
C5 |
C4 |
C10 |
124.6 |
121.6 |
C4 |
C5 |
C6 |
120.9 |
119.6 |
C4 |
C5 |
H5 |
120.3 |
120.2 |
C4 |
C10 |
C9 |
118.7 |
118.4 |
C4 |
C10 |
N15 |
121.7 |
120.8 |
C6 |
C5 |
H5 |
118.8 |
120.2 |
C5 |
C6 |
H6 |
119.8 |
119.6 |
N7 |
C8 |
C9 |
121.6 |
120.9 |
N7 |
C8 |
C11 |
116.8 |
117.0 |
C9 |
C8 |
C11 |
121.5 |
122.1 |
C8 |
C9 |
C10 |
118.3 |
119.7 |
C8 |
C9 |
C14 |
118.5 |
122.8 |
C8 |
C11 |
C12 |
115.6 |
110.6 |
C8 |
C11 |
H111 |
110.0 |
109.2 |
C8 |
C11 |
H112 |
110.0 |
109.2 |
C10 |
C9 |
C14 |
123.2 |
117.5 |
C9 |
C10 |
N15 |
119.6 |
120.8 |
C9 |
C14 |
C13 |
116.6 |
110.6 |
C9 |
C14 |
H141 |
109.7 |
109.2 |
C9 |
C14 |
H142 |
109.7 |
109.3 |
C10 |
N15 |
HN51 |
121.7 |
120.0 |
C10 |
N15 |
HN52 |
107.9 |
120.0 |
C12 |
C11 |
H111 |
109.9 |
109.3 |
C12 |
C11 |
H112 |
109.9 |
109.3 |
C11 |
C12 |
C13 |
110.4 |
108.5 |
C11 |
C12 |
H121 |
111.9 |
109.6 |
C11 |
C12 |
H122 |
111.9 |
109.7 |
H111 |
C11 |
H112 |
100.2 |
109.1 |
C13 |
C12 |
H121 |
111.9 |
109.6 |
C13 |
C12 |
H122 |
111.8 |
109.6 |
C12 |
C13 |
C14 |
110.6 |
108.4 |
C12 |
C13 |
H131 |
111.8 |
109.7 |
C12 |
C13 |
H132 |
111.8 |
109.7 |
H121 |
C12 |
H122 |
98.5 |
109.8 |
C14 |
C13 |
H131 |
111.7 |
109.7 |
C14 |
C13 |
H132 |
111.8 |
109.6 |
C13 |
C14 |
H141 |
109.6 |
109.2 |
C13 |
C14 |
H142 |
109.6 |
109.3 |
H131 |
C13 |
H132 |
98.6 |
109.7 |
H141 |
C14 |
H142 |
100.5 |
109.2 |
HN51 |
N15 |
HN52 |
107.8 |
120.0 |
Torsion Angles for THA
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C1 |
C2 |
H1 |
180.0 |
180.0 |
C2 |
C1 |
C6 |
C5 |
0.0 |
0.0 |
C2 |
C1 |
C6 |
H6 |
180.0 |
180.0 |
C3 |
C2 |
C1 |
H2 |
180.0 |
180.0 |
C1 |
C2 |
C3 |
C4 |
359.9 |
0.3 |
C1 |
C2 |
C3 |
N7 |
180.0 |
180.0 |
C2 |
C1 |
C6 |
H1 |
180.0 |
180.0 |
C6 |
C1 |
C2 |
C3 |
0.1 |
360.0 |
C6 |
C1 |
C2 |
H2 |
180.1 |
180.0 |
C4 |
C5 |
C6 |
C1 |
360.0 |
359.7 |
C1 |
C6 |
C5 |
H5 |
179.9 |
180.0 |
C5 |
C6 |
C1 |
H6 |
180.0 |
180.1 |
C2 |
C1 |
H1 |
C6 |
180.0 |
180.0 |
H1 |
C1 |
C2 |
C3 |
180.0 |
180.0 |
H1 |
C1 |
C2 |
H2 |
0.0 |
360.0 |
H1 |
C1 |
C6 |
C5 |
180.0 |
180.0 |
H1 |
C1 |
C6 |
H6 |
0.0 |
360.0 |
C3 |
C2 |
C1 |
C6 |
0.1 |
360.0 |
C3 |
C2 |
C1 |
H1 |
180.0 |
180.0 |
C1 |
C2 |
C3 |
H2 |
180.0 |
180.0 |
C4 |
C3 |
C2 |
N7 |
179.9 |
180.3 |
C2 |
C3 |
C4 |
C5 |
0.0 |
359.5 |
C2 |
C3 |
C4 |
C10 |
180.0 |
180.4 |
C2 |
C3 |
N7 |
C8 |
180.1 |
180.1 |
H2 |
C2 |
C1 |
C6 |
180.1 |
180.0 |
H2 |
C2 |
C1 |
H1 |
0.0 |
360.0 |
C1 |
C2 |
H2 |
C3 |
180.0 |
180.0 |
H2 |
C2 |
C3 |
C4 |
179.9 |
180.3 |
H2 |
C2 |
C3 |
N7 |
0.0 |
0.0 |
C4 |
C3 |
C2 |
H2 |
179.9 |
180.3 |
C2 |
C3 |
C4 |
N7 |
180.1 |
179.8 |
C4 |
C3 |
N7 |
C8 |
0.2 |
359.8 |
C5 |
C4 |
C3 |
C10 |
180.1 |
179.1 |
C3 |
C4 |
C5 |
C6 |
0.0 |
0.6 |
C3 |
C4 |
C5 |
H5 |
180.1 |
180.3 |
C3 |
C4 |
C10 |
C9 |
0.6 |
359.3 |
C3 |
C4 |
C10 |
N15 |
181.2 |
179.6 |
N7 |
C3 |
C2 |
H2 |
0.0 |
0.0 |
C2 |
C3 |
N7 |
C4 |
179.9 |
180.3 |
N7 |
C3 |
C4 |
C5 |
179.9 |
179.7 |
N7 |
C3 |
C4 |
C10 |
359.9 |
0.6 |
C3 |
N7 |
C8 |
C9 |
359.2 |
359.8 |
C3 |
N7 |
C8 |
C11 |
183.0 |
179.7 |
C1 |
C6 |
C5 |
C4 |
360.0 |
359.7 |
C5 |
C4 |
C3 |
N7 |
179.9 |
179.7 |
C3 |
C4 |
C5 |
C10 |
179.9 |
180.9 |
C5 |
C4 |
C10 |
C9 |
180.6 |
180.3 |
C5 |
C4 |
C10 |
N15 |
1.1 |
0.6 |
C6 |
C5 |
C4 |
H5 |
180.0 |
180.3 |
C4 |
C5 |
C6 |
H6 |
179.9 |
179.7 |
C10 |
C4 |
C3 |
N7 |
359.9 |
0.6 |
C3 |
C4 |
C10 |
C5 |
180.1 |
179.1 |
C10 |
C4 |
C5 |
C6 |
180.1 |
179.6 |
C10 |
C4 |
C5 |
H5 |
0.1 |
359.3 |
C8 |
C9 |
C10 |
C4 |
358.8 |
0.3 |
C4 |
C10 |
C9 |
C14 |
182.1 |
180.0 |
C9 |
C10 |
C4 |
N15 |
179.5 |
179.7 |
C4 |
C10 |
N15 |
HN51 |
180.0 |
359.7 |
C4 |
C10 |
N15 |
HN52 |
54.8 |
179.4 |
C5 |
C6 |
C1 |
H1 |
180.0 |
180.0 |
C1 |
C6 |
C5 |
H6 |
180.0 |
179.9 |
C6 |
C5 |
C4 |
C10 |
180.1 |
179.6 |
C4 |
C5 |
C6 |
H5 |
180.0 |
179.7 |
H5 |
C5 |
C4 |
C10 |
0.1 |
359.3 |
C4 |
C5 |
H5 |
C6 |
180.0 |
180.3 |
H5 |
C5 |
C6 |
H6 |
359.9 |
0.0 |
H6 |
C6 |
C1 |
H1 |
0.0 |
360.0 |
C1 |
C6 |
H6 |
C5 |
180.0 |
180.1 |
H6 |
C6 |
C5 |
H5 |
359.9 |
0.0 |
C9 |
C8 |
N7 |
C11 |
176.2 |
180.1 |
N7 |
C8 |
C9 |
C10 |
1.3 |
0.2 |
N7 |
C8 |
C9 |
C14 |
178.2 |
180.4 |
N7 |
C8 |
C11 |
C12 |
196.6 |
162.2 |
N7 |
C8 |
C11 |
H111 |
321.9 |
41.8 |
N7 |
C8 |
C11 |
H112 |
71.4 |
282.5 |
C4 |
C10 |
C9 |
C8 |
358.8 |
0.3 |
N7 |
C8 |
C9 |
C11 |
184.0 |
179.9 |
C9 |
C8 |
C11 |
C12 |
20.4 |
342.1 |
C9 |
C8 |
C11 |
H111 |
145.6 |
221.7 |
C9 |
C8 |
C11 |
H112 |
255.1 |
102.4 |
C10 |
C9 |
C8 |
C14 |
183.1 |
179.8 |
C8 |
C9 |
C10 |
N15 |
178.3 |
180.0 |
C8 |
C9 |
C14 |
C13 |
18.7 |
342.6 |
C8 |
C9 |
C14 |
H141 |
143.9 |
102.8 |
C8 |
C9 |
C14 |
H142 |
253.4 |
222.2 |
N7 |
C8 |
C11 |
C9 |
176.2 |
180.1 |
C11 |
C8 |
C9 |
C10 |
177.3 |
180.3 |
C11 |
C8 |
C9 |
C14 |
354.2 |
0.5 |
C12 |
C11 |
C8 |
H111 |
234.7 |
120.4 |
C12 |
C11 |
C8 |
H112 |
125.2 |
239.7 |
C8 |
C11 |
C12 |
C13 |
313.5 |
51.5 |
C8 |
C11 |
C12 |
H121 |
78.7 |
291.8 |
C8 |
C11 |
C12 |
H122 |
188.2 |
171.2 |
H111 |
C11 |
C8 |
H112 |
250.5 |
119.3 |
C4 |
C10 |
C9 |
N15 |
180.5 |
180.3 |
C10 |
C9 |
C8 |
C11 |
177.3 |
180.3 |
C8 |
C9 |
C10 |
C14 |
176.8 |
180.2 |
C10 |
C9 |
C14 |
C13 |
195.5 |
162.8 |
C10 |
C9 |
C14 |
H141 |
320.7 |
283.0 |
C10 |
C9 |
C14 |
H142 |
70.2 |
42.4 |
C9 |
C10 |
N15 |
HN51 |
0.6 |
180.0 |
C9 |
C10 |
N15 |
HN52 |
235.3 |
359.7 |
C14 |
C9 |
C8 |
C11 |
354.2 |
0.5 |
C8 |
C9 |
C14 |
C10 |
183.2 |
179.8 |
C14 |
C9 |
C10 |
N15 |
1.6 |
359.8 |
C12 |
C13 |
C14 |
C9 |
314.8 |
50.9 |
C9 |
C14 |
C13 |
H131 |
189.5 |
170.7 |
C9 |
C14 |
C13 |
H132 |
80.1 |
291.2 |
C13 |
C14 |
C9 |
H141 |
234.8 |
239.8 |
C13 |
C14 |
C9 |
H142 |
125.3 |
120.4 |
H141 |
C14 |
C9 |
H142 |
250.5 |
240.6 |
C4 |
C10 |
N15 |
C9 |
179.5 |
179.7 |
N15 |
C10 |
C9 |
C14 |
1.6 |
359.8 |
HN51 |
N15 |
C10 |
HN52 |
125.2 |
180.3 |
C8 |
C11 |
C12 |
H111 |
125.3 |
239.7 |
C8 |
C11 |
C12 |
H112 |
234.8 |
120.3 |
H111 |
C11 |
C12 |
H112 |
109.4 |
240.6 |
C13 |
C12 |
C11 |
H121 |
234.7 |
119.7 |
C13 |
C12 |
C11 |
H122 |
125.2 |
240.3 |
C11 |
C12 |
C13 |
C14 |
58.3 |
289.9 |
C11 |
C12 |
C13 |
H131 |
183.6 |
170.2 |
C11 |
C12 |
C13 |
H132 |
293.0 |
49.5 |
H121 |
C12 |
C11 |
H122 |
250.5 |
120.6 |
C8 |
C11 |
H111 |
C12 |
231.5 |
121.2 |
C8 |
C11 |
H111 |
H112 |
115.8 |
240.6 |
C12 |
C11 |
H111 |
H112 |
244.3 |
119.4 |
H111 |
C11 |
C12 |
C13 |
188.1 |
171.8 |
H111 |
C11 |
C12 |
H121 |
313.4 |
52.2 |
H111 |
C11 |
C12 |
H122 |
62.9 |
291.5 |
C8 |
C11 |
H112 |
C12 |
128.4 |
238.8 |
C8 |
C11 |
H112 |
H111 |
244.2 |
119.4 |
C12 |
C11 |
H112 |
H111 |
115.7 |
240.5 |
H112 |
C11 |
C12 |
C13 |
78.7 |
291.2 |
H112 |
C11 |
C12 |
H121 |
204.0 |
171.5 |
H112 |
C11 |
C12 |
H122 |
313.5 |
50.9 |
C9 |
C14 |
C13 |
C12 |
314.8 |
50.9 |
C13 |
C12 |
C11 |
H111 |
188.1 |
171.8 |
C13 |
C12 |
C11 |
H112 |
78.7 |
291.2 |
C11 |
C12 |
C13 |
H121 |
125.3 |
240.3 |
C11 |
C12 |
C13 |
H122 |
234.7 |
119.7 |
H121 |
C12 |
C13 |
H122 |
109.5 |
239.4 |
C14 |
C13 |
C12 |
H131 |
234.7 |
119.7 |
C14 |
C13 |
C12 |
H132 |
125.3 |
240.3 |
C12 |
C13 |
C14 |
H141 |
189.5 |
290.7 |
C12 |
C13 |
C14 |
H142 |
80.1 |
171.2 |
H131 |
C13 |
C12 |
H132 |
250.5 |
120.6 |
H121 |
C12 |
C11 |
H111 |
313.4 |
52.2 |
H121 |
C12 |
C11 |
H112 |
204.0 |
171.5 |
C11 |
C12 |
H121 |
C13 |
235.5 |
118.9 |
C11 |
C12 |
H121 |
H122 |
117.8 |
239.5 |
C13 |
C12 |
H121 |
H122 |
242.3 |
120.5 |
H121 |
C12 |
C13 |
C14 |
293.0 |
49.6 |
H121 |
C12 |
C13 |
H131 |
58.3 |
289.8 |
H121 |
C12 |
C13 |
H132 |
167.7 |
169.2 |
H122 |
C12 |
C11 |
H111 |
62.9 |
291.5 |
H122 |
C12 |
C11 |
H112 |
313.5 |
50.9 |
C11 |
C12 |
H122 |
C13 |
124.4 |
241.0 |
C11 |
C12 |
H122 |
H121 |
242.2 |
120.5 |
C13 |
C12 |
H122 |
H121 |
117.7 |
239.5 |
H122 |
C12 |
C13 |
C14 |
183.6 |
170.2 |
H122 |
C12 |
C13 |
H131 |
308.8 |
50.4 |
H122 |
C12 |
C13 |
H132 |
58.3 |
289.8 |
C9 |
C14 |
C13 |
H141 |
125.3 |
120.2 |
C9 |
C14 |
C13 |
H142 |
234.7 |
239.7 |
C14 |
C13 |
C12 |
H121 |
293.0 |
49.6 |
C14 |
C13 |
C12 |
H122 |
183.6 |
170.2 |
C12 |
C13 |
C14 |
H131 |
125.3 |
240.2 |
C12 |
C13 |
C14 |
H132 |
234.7 |
119.7 |
H131 |
C13 |
C14 |
H132 |
109.4 |
239.5 |
H141 |
C14 |
C13 |
H142 |
109.4 |
119.4 |
H131 |
C13 |
C12 |
H121 |
58.3 |
289.8 |
H131 |
C13 |
C12 |
H122 |
308.8 |
50.4 |
C12 |
C13 |
H131 |
C14 |
235.4 |
118.9 |
C12 |
C13 |
H131 |
H132 |
117.7 |
239.4 |
C14 |
C13 |
H131 |
H132 |
242.3 |
120.5 |
H131 |
C13 |
C14 |
H141 |
64.2 |
50.4 |
H131 |
C13 |
C14 |
H142 |
314.8 |
291.0 |
H132 |
C13 |
C12 |
H121 |
167.7 |
169.2 |
H132 |
C13 |
C12 |
H122 |
58.3 |
289.8 |
C12 |
C13 |
H132 |
C14 |
124.7 |
241.1 |
C12 |
C13 |
H132 |
H131 |
242.3 |
120.6 |
C14 |
C13 |
H132 |
H131 |
117.6 |
239.5 |
H132 |
C13 |
C14 |
H141 |
314.8 |
171.0 |
H132 |
C13 |
C14 |
H142 |
205.4 |
51.5 |
C9 |
C14 |
H141 |
C13 |
230.9 |
238.9 |
C9 |
C14 |
H141 |
H142 |
115.5 |
119.4 |
H141 |
C14 |
C13 |
H131 |
64.2 |
50.4 |
H141 |
C14 |
C13 |
H132 |
314.8 |
171.0 |
C13 |
C14 |
H141 |
H142 |
244.6 |
240.5 |
C9 |
C14 |
H142 |
C13 |
129.2 |
121.1 |
C9 |
C14 |
H142 |
H141 |
244.5 |
240.6 |
H142 |
C14 |
C13 |
H131 |
314.8 |
291.0 |
H142 |
C14 |
C13 |
H132 |
205.4 |
51.5 |
C13 |
C14 |
H142 |
H141 |
115.4 |
119.5 |
C10 |
N15 |
HN51 |
HN52 |
234.7 |
179.7 |
C10 |
N15 |
HN52 |
HN51 |
133.1 |
180.3 |