PDB Chemical Component TH6
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for TH6
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.470 |
1.469 |
| CA |
CB |
1.550 |
1.530 |
| CA |
C |
1.531 |
1.506 |
| CB |
OB1 |
1.431 |
1.429 |
| CB |
CG |
1.508 |
1.530 |
| CG |
OG1 |
1.433 |
1.429 |
| C |
O |
1.234 |
1.208 |
| C |
OXT |
1.345 |
1.343 |
| N |
H |
1.000 |
1.009 |
| N |
H2 |
1.000 |
1.009 |
| CA |
HA |
1.101 |
1.090 |
| CB |
HB |
1.100 |
1.091 |
| OB1 |
HB1 |
0.950 |
0.967 |
| CG |
HG1C |
1.100 |
1.090 |
| CG |
HG2C |
1.100 |
1.090 |
| OG1 |
HG1 |
0.950 |
0.967 |
| OXT |
HXT |
0.950 |
0.968 |
Bond Angles for TH6
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N |
CA |
CB |
109.6 |
109.5 |
| N |
CA |
C |
108.9 |
109.5 |
| CA |
N |
H |
109.5 |
111.0 |
| CA |
N |
H2 |
109.4 |
111.0 |
| N |
CA |
HA |
112.5 |
109.5 |
| CB |
CA |
C |
116.3 |
109.5 |
| CA |
CB |
OB1 |
109.2 |
109.5 |
| CA |
CB |
CG |
104.8 |
109.5 |
| CB |
CA |
HA |
104.3 |
109.5 |
| CA |
CB |
HB |
113.3 |
109.4 |
| CA |
C |
O |
116.0 |
120.0 |
| CA |
C |
OXT |
119.2 |
120.0 |
| C |
CA |
HA |
105.2 |
109.4 |
| OB1 |
CB |
CG |
111.3 |
109.5 |
| OB1 |
CB |
HB |
107.0 |
109.4 |
| CB |
OB1 |
HB1 |
109.5 |
114.0 |
| CB |
CG |
OG1 |
110.2 |
109.5 |
| CG |
CB |
HB |
111.3 |
109.5 |
| CB |
CG |
HG1C |
109.2 |
109.5 |
| CB |
CG |
HG2C |
109.0 |
109.5 |
| OG1 |
CG |
HG1C |
109.2 |
109.4 |
| OG1 |
CG |
HG2C |
109.0 |
109.5 |
| CG |
OG1 |
HG1 |
109.5 |
114.0 |
| O |
C |
OXT |
124.8 |
120.0 |
| C |
OXT |
HXT |
109.5 |
117.0 |
| H |
N |
H2 |
109.4 |
111.0 |
| HG1C |
CG |
HG2C |
110.1 |
109.5 |
Torsion Angles for TH6
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CB |
CA |
N |
C |
231.7 |
240.0 |
| N |
CA |
CB |
OB1 |
279.2 |
65.1 |
| N |
CA |
CB |
CG |
159.9 |
305.0 |
| CB |
CA |
N |
HA |
115.6 |
120.0 |
| N |
CA |
CB |
HB |
38.4 |
185.0 |
| N |
CA |
C |
O |
48.4 |
340.0 |
| N |
CA |
C |
OXT |
230.0 |
160.0 |
| C |
CA |
N |
HA |
243.9 |
240.0 |
| H |
N |
CA |
H2 |
240.0 |
236.1 |
| N |
CA |
CB |
C |
124.1 |
120.0 |
| CB |
CA |
N |
H |
331.1 |
300.0 |
| CB |
CA |
N |
H2 |
91.0 |
63.9 |
| N |
CA |
CB |
HA |
239.4 |
240.0 |
| CB |
CA |
C |
O |
172.8 |
100.0 |
| CB |
CA |
C |
OXT |
354.5 |
280.0 |
| C |
CA |
CB |
HA |
115.3 |
120.0 |
| OB1 |
CB |
CA |
CG |
119.3 |
120.0 |
| OB1 |
CB |
CA |
HB |
240.8 |
240.1 |
| CA |
CB |
OB1 |
HB1 |
127.5 |
299.9 |
| CA |
CB |
CG |
OG1 |
59.6 |
185.0 |
| CG |
CB |
CA |
HB |
121.5 |
120.1 |
| CA |
CB |
CG |
HG1C |
179.6 |
305.0 |
| CA |
CB |
CG |
HG2C |
300.0 |
65.0 |
| N |
CA |
C |
CB |
235.5 |
240.0 |
| C |
CA |
N |
H |
99.4 |
60.0 |
| C |
CA |
N |
H2 |
219.4 |
184.0 |
| N |
CA |
C |
HA |
120.7 |
120.0 |
| C |
CA |
CB |
OB1 |
155.2 |
305.0 |
| C |
CA |
CB |
CG |
35.8 |
185.0 |
| CB |
CA |
C |
HA |
245.2 |
240.0 |
| C |
CA |
CB |
HB |
274.4 |
65.0 |
| O |
C |
CA |
OXT |
178.4 |
179.9 |
| CA |
C |
OXT |
HXT |
178.2 |
180.0 |
| OB1 |
CB |
CA |
C |
155.2 |
305.0 |
| CA |
CB |
OB1 |
CG |
244.8 |
240.0 |
| OB1 |
CB |
CA |
HA |
39.9 |
185.1 |
| CA |
CB |
OB1 |
HB |
123.0 |
119.9 |
| OB1 |
CB |
CG |
OG1 |
301.8 |
65.0 |
| CG |
CB |
OB1 |
HB |
238.2 |
240.0 |
| OB1 |
CB |
CG |
HG1C |
61.8 |
184.9 |
| OB1 |
CB |
CG |
HG2C |
182.1 |
305.0 |
| CG |
CB |
CA |
C |
35.8 |
185.0 |
| CA |
CB |
CG |
OB1 |
117.9 |
120.0 |
| CG |
CB |
CA |
HA |
280.6 |
65.0 |
| CA |
CB |
CG |
HB |
237.2 |
240.0 |
| OB1 |
CB |
CG |
HB |
119.3 |
120.0 |
| CG |
CB |
OB1 |
HB1 |
242.7 |
60.0 |
| OG1 |
CG |
CB |
HG1C |
240.0 |
240.1 |
| OG1 |
CG |
CB |
HG2C |
119.7 |
120.0 |
| CB |
CG |
OG1 |
HG1 |
63.4 |
180.0 |
| HG1C |
CG |
CB |
HG2C |
239.7 |
240.0 |
| OG1 |
CG |
CB |
HB |
182.4 |
305.0 |
| CB |
CG |
OG1 |
HG1C |
120.0 |
120.0 |
| CB |
CG |
OG1 |
HG2C |
240.3 |
240.0 |
| HG1C |
CG |
OG1 |
HG2C |
120.3 |
120.0 |
| CA |
C |
O |
OXT |
181.7 |
180.1 |
| O |
C |
CA |
HA |
287.6 |
220.0 |
| O |
C |
OXT |
HXT |
0.0 |
0.0 |
| CA |
C |
OXT |
O |
178.2 |
179.9 |
| OXT |
C |
CA |
HA |
109.3 |
40.0 |
| H |
N |
CA |
CB |
331.1 |
300.0 |
| H |
N |
CA |
C |
99.4 |
60.0 |
| CA |
N |
H |
H2 |
120.0 |
123.9 |
| H |
N |
CA |
HA |
215.5 |
180.0 |
| H2 |
N |
CA |
CB |
91.0 |
63.9 |
| H2 |
N |
CA |
C |
219.4 |
184.0 |
| CA |
N |
H2 |
H |
240.0 |
236.1 |
| H2 |
N |
CA |
HA |
335.5 |
303.9 |
| N |
CA |
HA |
CB |
118.7 |
120.0 |
| N |
CA |
HA |
C |
241.7 |
240.0 |
| HA |
CA |
N |
H |
215.5 |
180.0 |
| HA |
CA |
N |
H2 |
335.5 |
303.9 |
| CB |
CA |
HA |
C |
122.9 |
120.0 |
| HA |
CA |
CB |
OB1 |
39.9 |
185.1 |
| HA |
CA |
CB |
CG |
280.6 |
65.0 |
| HA |
CA |
CB |
HB |
159.1 |
305.0 |
| HA |
CA |
C |
O |
287.6 |
220.0 |
| HA |
CA |
C |
OXT |
109.3 |
40.0 |
| HB |
CB |
CA |
C |
274.4 |
65.0 |
| CA |
CB |
HB |
OB1 |
239.6 |
240.1 |
| CA |
CB |
HB |
CG |
117.8 |
120.0 |
| HB |
CB |
CA |
HA |
159.1 |
305.0 |
| OB1 |
CB |
HB |
CG |
238.2 |
240.0 |
| HB |
CB |
OB1 |
HB1 |
4.5 |
180.0 |
| HB |
CB |
CG |
OG1 |
182.4 |
305.0 |
| HB |
CB |
CG |
HG1C |
302.5 |
65.0 |
| HB |
CB |
CG |
HG2C |
62.8 |
185.0 |
| HB1 |
OB1 |
CB |
CG |
242.7 |
60.0 |
| HB1 |
OB1 |
CB |
HB |
4.5 |
180.0 |
| CB |
CG |
HG1C |
OG1 |
239.4 |
240.0 |
| HG1C |
CG |
CB |
HB |
302.5 |
65.0 |
| CB |
CG |
HG1C |
HG2C |
119.7 |
120.0 |
| OG1 |
CG |
HG1C |
HG2C |
240.3 |
240.0 |
| HG1C |
CG |
OG1 |
HG1 |
303.4 |
60.1 |
| CB |
CG |
HG2C |
OG1 |
120.4 |
120.0 |
| HG2C |
CG |
CB |
HB |
62.8 |
185.0 |
| CB |
CG |
HG2C |
HG1C |
240.2 |
240.0 |
| OG1 |
CG |
HG2C |
HG1C |
119.8 |
120.0 |
| HG2C |
CG |
OG1 |
HG1 |
183.0 |
300.0 |
| HG1 |
OG1 |
CG |
HG1C |
303.4 |
60.1 |
| HG1 |
OG1 |
CG |
HG2C |
183.0 |
300.0 |