PDB Chemical Component TFR
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for TFR
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C1 |
N |
1.339 |
1.348 |
| CA |
N |
1.342 |
1.466 |
| N |
HN |
1.000 |
0.969 |
| O |
CZ1 |
1.246 |
1.208 |
| O1 |
C1 |
1.222 |
1.212 |
| C1 |
CA1 |
1.513 |
1.507 |
| CC |
CA |
1.517 |
1.531 |
| CA |
CB |
1.505 |
1.530 |
| CA |
HA |
1.100 |
1.089 |
| CB |
HB |
1.100 |
1.090 |
| CB |
HBA |
1.100 |
1.091 |
| CB |
HBB |
1.100 |
1.091 |
| CD |
CC |
1.530 |
1.530 |
| CC |
OB1 |
1.439 |
1.429 |
| CC |
HC |
1.100 |
1.089 |
| FF |
CD |
1.328 |
1.399 |
| FE |
CD |
1.332 |
1.399 |
| CD |
FG |
1.324 |
1.399 |
| CA1 |
CB1 |
1.525 |
1.530 |
| CA1 |
HA1 |
1.100 |
1.090 |
| CA1 |
HA1A |
1.100 |
1.090 |
| CB1 |
CG1 |
1.526 |
1.530 |
| CB1 |
HB1 |
1.100 |
1.090 |
| CB1 |
HB1A |
1.100 |
1.089 |
| OB1 |
HOB1 |
0.950 |
0.967 |
| CG1 |
CD1 |
1.526 |
1.530 |
| CD1 |
CE1 |
1.527 |
1.530 |
| CD1 |
HD1 |
1.100 |
1.090 |
| CD1 |
HD1A |
1.100 |
1.090 |
| CE1 |
CZ1 |
1.504 |
1.506 |
| CE1 |
NZ1 |
1.455 |
1.470 |
| CE1 |
HE1 |
1.100 |
1.090 |
| CG1 |
HG1 |
1.100 |
1.090 |
| CG1 |
HG1A |
1.100 |
1.090 |
| CZ1 |
OH1 |
1.254 |
1.342 |
| OH1 |
HOH1 |
0.950 |
0.967 |
| NZ1 |
HNZ1 |
1.000 |
1.009 |
| NZ1 |
HNZA |
1.000 |
1.009 |
Bond Angles for TFR
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C1 |
N |
HN |
119.0 |
120.0 |
| CA |
N |
HN |
119.0 |
120.0 |
| O |
CZ1 |
CE1 |
117.8 |
120.0 |
| O |
CZ1 |
OH1 |
123.0 |
120.0 |
| O1 |
C1 |
CA1 |
119.9 |
120.0 |
| C1 |
CA1 |
CB1 |
108.0 |
109.5 |
| C1 |
CA1 |
HA1 |
109.8 |
109.4 |
| C1 |
CA1 |
HA1A |
109.9 |
109.5 |
| CC |
CA |
HA |
106.9 |
109.5 |
| CB |
CA |
HA |
107.0 |
109.5 |
| CA |
CB |
HB |
109.5 |
109.5 |
| CA |
CB |
HBA |
109.5 |
109.5 |
| CA |
CB |
HBB |
109.5 |
109.5 |
| HB |
CB |
HBA |
109.5 |
109.4 |
| HB |
CB |
HBB |
109.5 |
109.5 |
| HBA |
CB |
HBB |
109.5 |
109.4 |
| CD |
CC |
OB1 |
109.0 |
109.5 |
| CD |
CC |
HC |
108.5 |
109.5 |
| OB1 |
CC |
HC |
109.7 |
109.5 |
| CC |
OB1 |
HOB1 |
109.5 |
114.0 |
| FF |
CD |
FG |
110.7 |
109.4 |
| FE |
CD |
FG |
108.1 |
109.5 |
| CB1 |
CA1 |
HA1 |
109.8 |
109.5 |
| CB1 |
CA1 |
HA1A |
109.8 |
109.5 |
| CA1 |
CB1 |
CG1 |
113.7 |
109.4 |
| CA1 |
CB1 |
HB1 |
108.4 |
109.4 |
| CA1 |
CB1 |
HB1A |
108.4 |
109.5 |
| HA1 |
CA1 |
HA1A |
109.5 |
109.5 |
| CG1 |
CB1 |
HB1 |
108.4 |
109.4 |
| CG1 |
CB1 |
HB1A |
108.4 |
109.5 |
| CB1 |
CG1 |
CD1 |
110.0 |
109.4 |
| CB1 |
CG1 |
HG1 |
109.4 |
109.4 |
| CB1 |
CG1 |
HG1A |
109.4 |
109.5 |
| HB1 |
CB1 |
HB1A |
109.5 |
109.5 |
| CG1 |
CD1 |
HD1 |
108.7 |
109.5 |
| CG1 |
CD1 |
HD1A |
108.7 |
109.4 |
| CE1 |
CD1 |
HD1 |
108.8 |
109.5 |
| CE1 |
CD1 |
HD1A |
108.7 |
109.5 |
| CD1 |
CE1 |
CZ1 |
109.9 |
109.5 |
| CD1 |
CE1 |
NZ1 |
109.6 |
109.5 |
| CD1 |
CE1 |
HE1 |
108.8 |
109.5 |
| HD1 |
CD1 |
HD1A |
109.5 |
109.5 |
| CZ1 |
CE1 |
NZ1 |
109.6 |
109.5 |
| CZ1 |
CE1 |
HE1 |
109.1 |
109.5 |
| CE1 |
CZ1 |
OH1 |
119.2 |
120.0 |
| NZ1 |
CE1 |
HE1 |
109.8 |
109.4 |
| CE1 |
NZ1 |
HNZ1 |
109.5 |
111.0 |
| CE1 |
NZ1 |
HNZA |
109.5 |
110.9 |
| HG1 |
CG1 |
HG1A |
109.5 |
109.5 |
| CZ1 |
OH1 |
HOH1 |
109.5 |
117.0 |
| HNZ1 |
NZ1 |
HNZA |
109.5 |
111.0 |
Torsion Angles for TFR
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
C1 |
HN |
180.0 |
180.3 |
| C1 |
N |
CA |
HN |
180.0 |
179.7 |
| CD1 |
CE1 |
CZ1 |
O |
99.2 |
260.0 |
| O |
CZ1 |
CE1 |
NZ1 |
219.6 |
20.0 |
| O |
CZ1 |
CE1 |
HE1 |
339.9 |
140.0 |
| CE1 |
CZ1 |
O |
OH1 |
179.4 |
180.0 |
| O |
CZ1 |
OH1 |
HOH1 |
360.0 |
0.0 |
| O1 |
C1 |
N |
HN |
179.9 |
179.9 |
| O1 |
C1 |
CA1 |
CB1 |
112.9 |
0.1 |
| O1 |
C1 |
CA1 |
HA1 |
232.6 |
120.0 |
| O1 |
C1 |
CA1 |
HA1A |
353.1 |
240.1 |
| CA1 |
C1 |
N |
HN |
359.8 |
0.1 |
| CB1 |
CA1 |
C1 |
HA1 |
240.2 |
240.1 |
| CB1 |
CA1 |
C1 |
HA1A |
119.8 |
120.1 |
| C1 |
CA1 |
CB1 |
CG1 |
188.8 |
180.0 |
| C1 |
CA1 |
CB1 |
HB1 |
309.4 |
299.9 |
| C1 |
CA1 |
CB1 |
HB1A |
68.1 |
59.9 |
| HA1 |
CA1 |
C1 |
HA1A |
239.5 |
240.0 |
| CC |
CA |
N |
HN |
302.2 |
335.0 |
| CB |
CA |
CC |
HA |
117.0 |
120.0 |
| CC |
CA |
CB |
HB |
305.3 |
60.0 |
| CC |
CA |
CB |
HBA |
65.4 |
180.0 |
| CC |
CA |
CB |
HBB |
185.3 |
300.0 |
| CB |
CA |
N |
HN |
67.3 |
95.0 |
| CC |
CA |
CB |
HA |
243.0 |
240.0 |
| HB |
CB |
CA |
HBA |
240.0 |
240.0 |
| HB |
CB |
CA |
HBB |
120.0 |
120.1 |
| HBA |
CB |
CA |
HBB |
240.0 |
240.0 |
| HA |
CA |
N |
HN |
183.6 |
215.1 |
| HA |
CA |
CB |
HB |
62.3 |
180.0 |
| HA |
CA |
CB |
HBA |
182.3 |
300.0 |
| HA |
CA |
CB |
HBB |
302.3 |
60.0 |
| HB |
CB |
CA |
HA |
62.3 |
180.0 |
| CA |
CB |
HB |
HBA |
120.0 |
120.0 |
| CA |
CB |
HB |
HBB |
240.0 |
239.9 |
| HBA |
CB |
HB |
HBB |
120.0 |
119.9 |
| HBA |
CB |
CA |
HA |
182.3 |
300.0 |
| CA |
CB |
HBA |
HB |
240.0 |
240.0 |
| CA |
CB |
HBA |
HBB |
120.0 |
120.0 |
| HB |
CB |
HBA |
HBB |
240.0 |
240.0 |
| HBB |
CB |
CA |
HA |
302.3 |
60.0 |
| CA |
CB |
HBB |
HB |
120.0 |
120.1 |
| CA |
CB |
HBB |
HBA |
240.0 |
240.0 |
| HB |
CB |
HBB |
HBA |
120.0 |
120.0 |
| CD |
CC |
CA |
HA |
54.1 |
65.0 |
| OB1 |
CC |
CD |
HC |
119.4 |
120.1 |
| CD |
CC |
OB1 |
HOB1 |
301.7 |
59.9 |
| OB1 |
CC |
CA |
HA |
174.8 |
185.0 |
| CD |
CC |
OB1 |
HC |
241.3 |
240.0 |
| HC |
CC |
CA |
HA |
295.1 |
305.0 |
| CD |
CC |
HC |
OB1 |
119.0 |
120.0 |
| HC |
CC |
OB1 |
HOB1 |
60.4 |
180.0 |
| FF |
CD |
CC |
OB1 |
184.3 |
180.1 |
| FF |
CD |
CC |
HC |
64.9 |
60.0 |
| FE |
CD |
FF |
FG |
240.7 |
239.9 |
| FE |
CD |
CC |
OB1 |
63.7 |
60.0 |
| FE |
CD |
CC |
HC |
304.3 |
300.0 |
| FF |
CD |
FE |
FG |
120.8 |
120.0 |
| FG |
CD |
CC |
OB1 |
304.8 |
300.0 |
| FG |
CD |
CC |
HC |
185.4 |
180.0 |
| C1 |
CA1 |
CB1 |
HA1 |
119.7 |
119.9 |
| C1 |
CA1 |
CB1 |
HA1A |
240.2 |
240.0 |
| HA1 |
CA1 |
CB1 |
HA1A |
120.5 |
120.1 |
| CG1 |
CB1 |
CA1 |
HB1 |
239.4 |
240.1 |
| CG1 |
CB1 |
CA1 |
HB1A |
120.6 |
120.1 |
| CA1 |
CB1 |
CG1 |
CD1 |
172.9 |
180.0 |
| CA1 |
CB1 |
CG1 |
HG1 |
293.0 |
299.9 |
| CA1 |
CB1 |
CG1 |
HG1A |
52.8 |
60.0 |
| HB1 |
CB1 |
CA1 |
HB1A |
241.3 |
240.0 |
| C1 |
CA1 |
HA1 |
CB1 |
241.4 |
240.1 |
| C1 |
CA1 |
HA1 |
HA1A |
120.7 |
120.0 |
| CB1 |
CA1 |
HA1 |
HA1A |
239.3 |
239.9 |
| HA1 |
CA1 |
CB1 |
CG1 |
69.0 |
60.1 |
| HA1 |
CA1 |
CB1 |
HB1 |
189.7 |
180.0 |
| HA1 |
CA1 |
CB1 |
HB1A |
308.4 |
300.0 |
| C1 |
CA1 |
HA1A |
CB1 |
118.6 |
120.0 |
| C1 |
CA1 |
HA1A |
HA1 |
239.3 |
240.1 |
| CB1 |
CA1 |
HA1A |
HA1 |
120.7 |
120.0 |
| HA1A |
CA1 |
CB1 |
CG1 |
308.6 |
300.0 |
| HA1A |
CA1 |
CB1 |
HB1 |
69.2 |
60.0 |
| HA1A |
CA1 |
CB1 |
HB1A |
187.9 |
180.0 |
| CG1 |
CB1 |
CA1 |
HA1 |
69.0 |
60.1 |
| CG1 |
CB1 |
CA1 |
HA1A |
308.6 |
300.0 |
| CA1 |
CB1 |
CG1 |
HB1 |
120.6 |
119.9 |
| CA1 |
CB1 |
CG1 |
HB1A |
239.4 |
240.0 |
| HB1 |
CB1 |
CG1 |
HB1A |
118.7 |
120.1 |
| CB1 |
CG1 |
CD1 |
HD1 |
290.9 |
59.9 |
| CB1 |
CG1 |
CD1 |
HD1A |
50.1 |
299.9 |
| HG1 |
CG1 |
CB1 |
HG1A |
240.2 |
240.0 |
| HB1 |
CB1 |
CA1 |
HA1 |
189.7 |
180.0 |
| HB1 |
CB1 |
CA1 |
HA1A |
69.2 |
60.0 |
| CA1 |
CB1 |
HB1 |
CG1 |
236.1 |
240.1 |
| CA1 |
CB1 |
HB1 |
HB1A |
118.1 |
120.0 |
| CG1 |
CB1 |
HB1 |
HB1A |
241.9 |
239.9 |
| HB1 |
CB1 |
CG1 |
CD1 |
52.3 |
60.1 |
| HB1 |
CB1 |
CG1 |
HG1 |
172.4 |
180.0 |
| HB1 |
CB1 |
CG1 |
HG1A |
292.2 |
300.1 |
| HB1A |
CB1 |
CA1 |
HA1 |
308.4 |
300.0 |
| HB1A |
CB1 |
CA1 |
HA1A |
187.9 |
180.0 |
| CA1 |
CB1 |
HB1A |
CG1 |
123.9 |
120.0 |
| CA1 |
CB1 |
HB1A |
HB1 |
241.9 |
240.0 |
| CG1 |
CB1 |
HB1A |
HB1 |
118.1 |
120.0 |
| HB1A |
CB1 |
CG1 |
CD1 |
293.6 |
300.0 |
| HB1A |
CB1 |
CG1 |
HG1 |
53.6 |
60.0 |
| HB1A |
CB1 |
CG1 |
HG1A |
173.5 |
180.0 |
| HOB1 |
OB1 |
CC |
HC |
60.4 |
180.0 |
| CD1 |
CG1 |
CB1 |
HB1 |
52.3 |
60.1 |
| CD1 |
CG1 |
CB1 |
HB1A |
293.6 |
300.0 |
| CB1 |
CG1 |
CD1 |
HG1 |
120.1 |
119.9 |
| CB1 |
CG1 |
CD1 |
HG1A |
239.9 |
240.0 |
| CE1 |
CD1 |
CG1 |
HD1 |
239.5 |
120.0 |
| CE1 |
CD1 |
CG1 |
HD1A |
120.4 |
240.0 |
| CG1 |
CD1 |
CE1 |
CZ1 |
268.1 |
185.0 |
| CG1 |
CD1 |
CE1 |
NZ1 |
147.6 |
65.0 |
| CG1 |
CD1 |
CE1 |
HE1 |
27.6 |
305.0 |
| HD1 |
CD1 |
CG1 |
HD1A |
240.9 |
120.0 |
| O |
CZ1 |
CE1 |
CD1 |
99.2 |
260.0 |
| CB1 |
CG1 |
CD1 |
CE1 |
170.5 |
180.0 |
| CG1 |
CD1 |
CE1 |
HD1 |
120.5 |
240.0 |
| CG1 |
CD1 |
CE1 |
HD1A |
239.6 |
119.9 |
| HD1 |
CD1 |
CE1 |
HD1A |
119.1 |
239.9 |
| CZ1 |
CE1 |
CD1 |
NZ1 |
120.5 |
120.0 |
| CZ1 |
CE1 |
CD1 |
HE1 |
240.6 |
240.0 |
| CD1 |
CE1 |
CZ1 |
OH1 |
278.6 |
80.0 |
| NZ1 |
CE1 |
CD1 |
HE1 |
120.1 |
119.9 |
| CD1 |
CE1 |
NZ1 |
HNZ1 |
180.0 |
60.0 |
| CD1 |
CE1 |
NZ1 |
HNZA |
300.0 |
184.0 |
| CG1 |
CD1 |
HD1 |
HD1A |
118.7 |
240.0 |
| CE1 |
CD1 |
HD1 |
HD1A |
241.4 |
120.0 |
| HD1 |
CD1 |
CE1 |
CZ1 |
147.7 |
305.0 |
| HD1 |
CD1 |
CE1 |
NZ1 |
27.2 |
185.0 |
| HD1 |
CD1 |
CE1 |
HE1 |
267.1 |
65.0 |
| CG1 |
CD1 |
HD1A |
HD1 |
241.3 |
120.0 |
| CE1 |
CD1 |
HD1A |
HD1 |
118.7 |
239.9 |
| HD1A |
CD1 |
CE1 |
CZ1 |
28.6 |
65.0 |
| HD1A |
CD1 |
CE1 |
NZ1 |
268.1 |
305.0 |
| HD1A |
CD1 |
CE1 |
HE1 |
148.0 |
185.1 |
| O |
CZ1 |
CE1 |
OH1 |
180.6 |
180.0 |
| CZ1 |
CE1 |
CD1 |
HD1 |
147.7 |
305.0 |
| CZ1 |
CE1 |
CD1 |
HD1A |
28.6 |
65.0 |
| CD1 |
CE1 |
CZ1 |
NZ1 |
239.5 |
240.0 |
| CD1 |
CE1 |
CZ1 |
HE1 |
119.2 |
120.0 |
| NZ1 |
CE1 |
CZ1 |
HE1 |
239.7 |
240.0 |
| CZ1 |
CE1 |
NZ1 |
HNZ1 |
59.3 |
300.0 |
| CZ1 |
CE1 |
NZ1 |
HNZA |
179.3 |
64.0 |
| CE1 |
CZ1 |
OH1 |
HOH1 |
180.6 |
180.0 |
| NZ1 |
CE1 |
CD1 |
HD1 |
27.2 |
185.0 |
| NZ1 |
CE1 |
CD1 |
HD1A |
268.1 |
305.0 |
| CD1 |
CE1 |
NZ1 |
CZ1 |
120.7 |
120.0 |
| CD1 |
CE1 |
NZ1 |
HE1 |
240.5 |
240.0 |
| CZ1 |
CE1 |
NZ1 |
HE1 |
119.9 |
120.1 |
| NZ1 |
CE1 |
CZ1 |
OH1 |
39.1 |
200.0 |
| HNZ1 |
NZ1 |
CE1 |
HNZA |
240.0 |
236.0 |
| HE1 |
CE1 |
CD1 |
HD1 |
267.1 |
65.0 |
| HE1 |
CE1 |
CD1 |
HD1A |
148.0 |
185.1 |
| CD1 |
CE1 |
HE1 |
CZ1 |
240.1 |
240.0 |
| CD1 |
CE1 |
HE1 |
NZ1 |
119.9 |
119.9 |
| CZ1 |
CE1 |
HE1 |
NZ1 |
239.8 |
240.0 |
| HE1 |
CE1 |
CZ1 |
OH1 |
159.4 |
320.0 |
| HE1 |
CE1 |
NZ1 |
HNZ1 |
299.5 |
180.0 |
| HE1 |
CE1 |
NZ1 |
HNZA |
59.5 |
303.9 |
| HG1 |
CG1 |
CB1 |
HB1 |
172.4 |
180.0 |
| HG1 |
CG1 |
CB1 |
HB1A |
53.6 |
60.0 |
| CB1 |
CG1 |
HG1 |
CD1 |
239.5 |
240.1 |
| CB1 |
CG1 |
HG1 |
HG1A |
119.8 |
120.0 |
| HG1 |
CG1 |
CD1 |
HD1 |
170.8 |
300.0 |
| HG1 |
CG1 |
CD1 |
HD1A |
290.0 |
180.0 |
| HG1A |
CG1 |
CB1 |
HB1 |
292.2 |
300.1 |
| HG1A |
CG1 |
CB1 |
HB1A |
173.5 |
180.0 |
| CB1 |
CG1 |
HG1A |
CD1 |
120.5 |
120.0 |
| CB1 |
CG1 |
HG1A |
HG1 |
240.2 |
240.0 |
| HG1A |
CG1 |
CD1 |
HD1 |
51.0 |
180.0 |
| HG1A |
CG1 |
CD1 |
HD1A |
170.2 |
60.0 |
| O |
CZ1 |
OH1 |
CE1 |
179.4 |
180.0 |
| OH1 |
CZ1 |
CE1 |
NZ1 |
39.1 |
200.0 |
| OH1 |
CZ1 |
CE1 |
HE1 |
159.4 |
320.0 |
| HNZ1 |
NZ1 |
CE1 |
HE1 |
299.5 |
180.0 |
| CE1 |
NZ1 |
HNZ1 |
HNZA |
120.0 |
123.9 |
| HNZA |
NZ1 |
CE1 |
HE1 |
59.5 |
303.9 |
| CE1 |
NZ1 |
HNZA |
HNZ1 |
240.0 |
236.1 |