PDB Chemical Component TEP
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for TEP
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
N1 |
1.392 |
1.466 |
C1 |
H11 |
1.089 |
1.090 |
C1 |
H12 |
1.090 |
1.090 |
C1 |
H13 |
1.091 |
1.090 |
N1 |
C2 |
1.371 |
1.344 |
N1 |
C6 |
1.357 |
1.348 |
C2 |
O2 |
1.233 |
1.216 |
C2 |
N3 |
1.372 |
1.346 |
N3 |
C3 |
1.385 |
1.465 |
N3 |
C4 |
1.364 |
1.385 |
C3 |
H31 |
1.089 |
1.090 |
C3 |
H32 |
1.090 |
1.089 |
C3 |
H33 |
1.090 |
1.089 |
C4 |
C5 |
1.365 |
1.388 |
C4 |
N9 |
1.390 |
1.336 |
C5 |
C6 |
1.407 |
1.411 |
C5 |
N7 |
1.388 |
1.380 |
C6 |
O6 |
1.230 |
1.218 |
N7 |
C8 |
1.354 |
1.348 |
N7 |
HN7 |
1.008 |
0.970 |
C8 |
N9 |
1.304 |
1.307 |
C8 |
H8 |
1.090 |
1.080 |
Bond Angles for TEP
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
N1 |
C1 |
H11 |
109.7 |
109.5 |
N1 |
C1 |
H12 |
109.5 |
109.5 |
N1 |
C1 |
H13 |
109.7 |
109.5 |
C1 |
N1 |
C2 |
118.1 |
119.5 |
C1 |
N1 |
C6 |
117.8 |
119.5 |
H11 |
C1 |
H12 |
109.4 |
109.5 |
H11 |
C1 |
H13 |
109.1 |
109.4 |
H12 |
C1 |
H13 |
109.4 |
109.4 |
C2 |
N1 |
C6 |
124.1 |
121.0 |
N1 |
C2 |
O2 |
116.5 |
119.2 |
N1 |
C2 |
N3 |
124.6 |
121.7 |
N1 |
C6 |
C5 |
110.5 |
119.2 |
N1 |
C6 |
O6 |
121.1 |
120.4 |
O2 |
C2 |
N3 |
118.9 |
119.1 |
C2 |
N3 |
C3 |
123.6 |
120.0 |
C2 |
N3 |
C4 |
113.1 |
120.0 |
C3 |
N3 |
C4 |
123.4 |
119.9 |
N3 |
C3 |
H31 |
109.5 |
109.4 |
N3 |
C3 |
H32 |
109.5 |
109.5 |
N3 |
C3 |
H33 |
109.7 |
109.5 |
N3 |
C4 |
C5 |
121.8 |
118.9 |
N3 |
C4 |
N9 |
127.9 |
133.9 |
H31 |
C3 |
H32 |
109.4 |
109.5 |
H31 |
C3 |
H33 |
109.4 |
109.4 |
H32 |
C3 |
H33 |
109.4 |
109.5 |
C5 |
C4 |
N9 |
110.3 |
107.2 |
C4 |
C5 |
C6 |
126.0 |
119.2 |
C4 |
C5 |
N7 |
105.7 |
106.3 |
C4 |
N9 |
C8 |
104.4 |
109.8 |
C6 |
C5 |
N7 |
128.3 |
134.6 |
C5 |
C6 |
O6 |
128.5 |
120.4 |
C5 |
N7 |
C8 |
105.9 |
107.0 |
C5 |
N7 |
HN7 |
124.8 |
126.5 |
C8 |
N7 |
HN7 |
129.2 |
126.5 |
N7 |
C8 |
N9 |
113.6 |
109.7 |
N7 |
C8 |
H8 |
123.1 |
125.1 |
N9 |
C8 |
H8 |
123.3 |
125.2 |
Torsion Angles for TEP
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
H11 |
C1 |
N1 |
H12 |
120.1 |
239.9 |
H11 |
C1 |
N1 |
H13 |
240.2 |
120.0 |
H12 |
C1 |
N1 |
H13 |
120.0 |
240.0 |
C2 |
N1 |
C1 |
C6 |
179.9 |
180.2 |
C1 |
N1 |
C2 |
O2 |
359.7 |
359.9 |
C1 |
N1 |
C2 |
N3 |
180.0 |
180.0 |
C1 |
N1 |
C6 |
C5 |
179.9 |
179.8 |
C1 |
N1 |
C6 |
O6 |
359.9 |
359.9 |
N1 |
C1 |
H11 |
H12 |
239.8 |
120.0 |
N1 |
C1 |
H11 |
H13 |
120.2 |
240.0 |
H11 |
C1 |
N1 |
C2 |
208.2 |
60.0 |
H11 |
C1 |
N1 |
C6 |
28.3 |
239.8 |
H12 |
C1 |
H11 |
H13 |
240.4 |
120.0 |
N1 |
C1 |
H12 |
H11 |
120.3 |
240.0 |
N1 |
C1 |
H12 |
H13 |
239.7 |
120.0 |
H12 |
C1 |
N1 |
C2 |
88.1 |
180.0 |
H12 |
C1 |
N1 |
C6 |
268.2 |
359.8 |
H11 |
C1 |
H12 |
H13 |
119.5 |
240.0 |
N1 |
C1 |
H13 |
H11 |
239.8 |
120.0 |
N1 |
C1 |
H13 |
H12 |
120.1 |
240.0 |
H13 |
C1 |
N1 |
C2 |
328.0 |
300.0 |
H13 |
C1 |
N1 |
C6 |
148.2 |
119.8 |
H11 |
C1 |
H13 |
H12 |
240.3 |
120.0 |
C2 |
N1 |
C1 |
H11 |
208.2 |
60.0 |
C2 |
N1 |
C1 |
H12 |
88.1 |
180.0 |
C2 |
N1 |
C1 |
H13 |
328.0 |
300.0 |
C1 |
N1 |
C2 |
C6 |
180.1 |
179.8 |
C2 |
N1 |
C6 |
C5 |
0.1 |
359.6 |
C2 |
N1 |
C6 |
O6 |
180.0 |
179.7 |
O2 |
C2 |
N1 |
N3 |
179.7 |
179.9 |
N1 |
C2 |
N3 |
C3 |
180.1 |
180.0 |
N1 |
C2 |
N3 |
C4 |
0.1 |
359.9 |
C6 |
N1 |
C1 |
H11 |
28.3 |
239.8 |
C6 |
N1 |
C1 |
H12 |
268.2 |
359.8 |
C6 |
N1 |
C1 |
H13 |
148.2 |
119.8 |
C1 |
N1 |
C6 |
C2 |
179.9 |
180.2 |
C6 |
N1 |
C2 |
O2 |
179.6 |
180.2 |
C6 |
N1 |
C2 |
N3 |
359.9 |
0.3 |
C4 |
C5 |
C6 |
N1 |
0.0 |
0.4 |
N1 |
C6 |
C5 |
N7 |
180.0 |
180.1 |
C5 |
C6 |
N1 |
O6 |
180.0 |
179.9 |
O2 |
C2 |
N1 |
C6 |
179.6 |
180.2 |
N1 |
C2 |
O2 |
N3 |
180.3 |
180.1 |
O2 |
C2 |
N3 |
C3 |
0.4 |
0.1 |
O2 |
C2 |
N3 |
C4 |
180.4 |
180.0 |
N3 |
C2 |
N1 |
C6 |
359.9 |
0.3 |
N1 |
C2 |
N3 |
O2 |
179.7 |
179.9 |
C3 |
N3 |
C2 |
C4 |
180.0 |
180.1 |
C2 |
N3 |
C3 |
H31 |
68.0 |
359.9 |
C2 |
N3 |
C3 |
H32 |
308.1 |
119.9 |
C2 |
N3 |
C3 |
H33 |
188.1 |
240.0 |
C2 |
N3 |
C4 |
C5 |
359.9 |
0.1 |
C2 |
N3 |
C4 |
N9 |
180.0 |
180.0 |
C2 |
N3 |
C3 |
C4 |
180.0 |
179.9 |
C3 |
N3 |
C4 |
C5 |
180.0 |
180.0 |
C3 |
N3 |
C4 |
N9 |
0.0 |
359.9 |
H31 |
C3 |
N3 |
H32 |
119.9 |
240.0 |
H31 |
C3 |
N3 |
H33 |
240.0 |
119.9 |
H32 |
C3 |
N3 |
H33 |
120.0 |
239.9 |
C2 |
N3 |
C4 |
C3 |
180.0 |
180.1 |
C4 |
N3 |
C3 |
H31 |
248.0 |
180.0 |
C4 |
N3 |
C3 |
H32 |
128.1 |
300.0 |
C4 |
N3 |
C3 |
H33 |
8.0 |
60.1 |
C5 |
C4 |
N3 |
N9 |
179.9 |
180.1 |
N3 |
C4 |
C5 |
C6 |
360.0 |
359.8 |
N3 |
C4 |
C5 |
N7 |
180.0 |
180.0 |
N3 |
C4 |
N9 |
C8 |
180.0 |
180.0 |
H31 |
C3 |
N3 |
C4 |
248.0 |
180.0 |
N3 |
C3 |
H31 |
H32 |
240.0 |
120.0 |
N3 |
C3 |
H31 |
H33 |
120.2 |
240.0 |
H32 |
C3 |
H31 |
H33 |
240.2 |
120.1 |
H32 |
C3 |
N3 |
C4 |
128.1 |
300.0 |
N3 |
C3 |
H32 |
H31 |
120.0 |
240.1 |
N3 |
C3 |
H32 |
H33 |
239.8 |
120.1 |
H31 |
C3 |
H32 |
H33 |
119.9 |
240.0 |
H33 |
C3 |
N3 |
C4 |
8.0 |
60.1 |
N3 |
C3 |
H33 |
H31 |
239.9 |
119.9 |
N3 |
C3 |
H33 |
H32 |
120.1 |
240.0 |
H31 |
C3 |
H33 |
H32 |
240.1 |
120.1 |
N1 |
C6 |
C5 |
C4 |
0.0 |
0.4 |
N3 |
C4 |
C5 |
N9 |
180.0 |
179.9 |
C5 |
C4 |
N9 |
C8 |
0.1 |
359.9 |
C6 |
C5 |
C4 |
N7 |
180.0 |
179.8 |
C4 |
C5 |
C6 |
O6 |
180.0 |
180.3 |
C4 |
C5 |
N7 |
C8 |
360.0 |
0.0 |
C4 |
C5 |
N7 |
HN7 |
180.4 |
180.0 |
N3 |
C4 |
N9 |
C5 |
180.0 |
180.1 |
N9 |
C4 |
C5 |
C6 |
180.0 |
179.8 |
N9 |
C4 |
C5 |
N7 |
360.0 |
0.0 |
N7 |
C8 |
N9 |
C4 |
359.9 |
0.1 |
C4 |
N9 |
C8 |
H8 |
180.2 |
179.9 |
N1 |
C6 |
C5 |
O6 |
180.0 |
180.1 |
C6 |
C5 |
C4 |
N9 |
180.0 |
179.8 |
C4 |
C5 |
C6 |
N7 |
180.0 |
180.3 |
C6 |
C5 |
N7 |
C8 |
180.0 |
180.3 |
C6 |
C5 |
N7 |
HN7 |
0.4 |
0.2 |
N7 |
C5 |
C4 |
N9 |
360.0 |
0.0 |
C4 |
C5 |
N7 |
C6 |
180.0 |
179.7 |
N7 |
C5 |
C6 |
O6 |
0.0 |
0.0 |
C8 |
N7 |
C5 |
HN7 |
179.6 |
180.0 |
C5 |
N7 |
C8 |
N9 |
0.1 |
359.9 |
C5 |
N7 |
C8 |
H8 |
179.8 |
180.1 |
N1 |
C6 |
O6 |
C5 |
180.1 |
179.9 |
O6 |
C6 |
C5 |
N7 |
0.0 |
0.0 |
C4 |
N9 |
C8 |
N7 |
359.9 |
0.1 |
C5 |
N7 |
C8 |
HN7 |
180.4 |
180.0 |
N9 |
C8 |
N7 |
H8 |
180.3 |
179.8 |
C5 |
N7 |
HN7 |
C8 |
179.5 |
180.0 |
HN7 |
N7 |
C8 |
N9 |
179.6 |
180.0 |
HN7 |
N7 |
C8 |
H8 |
359.3 |
0.1 |
N9 |
C8 |
N7 |
HN7 |
179.6 |
180.0 |
N7 |
C8 |
N9 |
H8 |
179.7 |
180.2 |
H8 |
C8 |
N7 |
HN7 |
359.3 |
0.1 |
N7 |
C8 |
H8 |
N9 |
180.3 |
179.8 |