PDB Chemical Component TDA

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for TDA

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O21 C21 1.327 1.342
O21 H21 0.950 0.966
O22 C21 1.188 1.208
C21 C22 1.601 1.507
C22 C23 1.584 1.530
C22 H222 1.114 1.090
C22 H221 1.115 1.090
C23 C24 1.468 1.530
C23 H232 1.116 1.090
C23 H231 1.115 1.090
C24 C25 1.635 1.530
C24 H242 1.115 1.090
C24 H241 1.114 1.090
C25 C26 1.513 1.530
C25 H252 1.115 1.090
C25 H251 1.115 1.090
C26 C27 1.607 1.529
C26 H262 1.114 1.090
C26 H261 1.115 1.090
C27 C28 1.598 1.530
C27 H272 1.116 1.090
C27 H271 1.115 1.090
C28 C29 1.650 1.530
C28 H282 1.115 1.090
C28 H281 1.115 1.090
C29 C30 1.652 1.530
C29 H292 1.115 1.090
C29 H291 1.115 1.090
C30 C31 1.498 1.530
C30 H302 1.115 1.090
C30 H301 1.115 1.090
C31 C32 1.651 1.529
C31 H312 1.116 1.090
C31 H311 1.114 1.090
C32 C33 1.477 1.531
C32 H322 1.114 1.090
C32 H321 1.116 1.090
C33 H333 1.115 1.089
C33 H332 1.115 1.090
C33 H331 1.115 1.090

Bond Angles for TDA

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C21 O21 H21 124.9 120.1
O21 C21 O22 124.9 120.0
O21 C21 C22 100.4 120.0
O22 C21 C22 125.4 120.0
C21 C22 C23 111.2 109.5
C21 C22 H222 111.6 109.5
C21 C22 H221 111.6 109.5
C23 C22 H222 111.6 109.5
C23 C22 H221 111.5 109.5
C22 C23 C24 113.5 109.5
C22 C23 H232 110.8 109.5
C22 C23 H231 110.8 109.5
H222 C22 H221 98.8 109.5
C24 C23 H232 110.7 109.5
C24 C23 H231 110.8 109.5
C23 C24 C25 113.0 109.5
C23 C24 H242 110.9 109.5
C23 C24 H241 110.9 109.5
H232 C23 H231 99.5 109.5
C25 C24 H242 110.9 109.5
C25 C24 H241 110.9 109.5
C24 C25 C26 110.2 109.5
C24 C25 H252 112.0 109.5
C24 C25 H251 112.0 109.5
H242 C24 H241 99.4 109.5
C26 C25 H252 111.9 109.5
C26 C25 H251 111.9 109.5
C25 C26 C27 104.1 109.5
C25 C26 H262 114.2 109.5
C25 C26 H261 114.2 109.5
H252 C25 H251 98.4 109.5
C27 C26 H262 114.2 109.5
C27 C26 H261 114.2 109.5
C26 C27 C28 104.9 109.5
C26 C27 H272 113.9 109.5
C26 C27 H271 113.9 109.5
H262 C26 H261 96.3 109.5
C28 C27 H272 113.9 109.5
C28 C27 H271 114.0 109.5
C27 C28 C29 105.3 109.5
C27 C28 H282 113.8 109.5
C27 C28 H281 113.8 109.5
H272 C27 H271 96.5 109.5
C29 C28 H282 113.8 109.5
C29 C28 H281 113.8 109.5
C28 C29 C30 97.9 109.5
C28 C29 H292 116.7 109.5
C28 C29 H291 116.7 109.5
H282 C28 H281 96.7 109.5
C30 C29 H292 116.7 109.5
C30 C29 H291 116.7 109.5
C29 C30 C31 105.3 109.5
C29 C30 H302 113.7 109.5
C29 C30 H301 113.8 109.5
H292 C29 H291 93.6 109.5
C31 C30 H302 113.7 109.5
C31 C30 H301 113.8 109.5
C30 C31 C32 111.2 109.5
C30 C31 H312 111.5 109.5
C30 C31 H311 111.6 109.5
H302 C30 H301 96.8 109.5
C32 C31 H312 111.6 109.5
C32 C31 H311 111.6 109.5
C31 C32 C33 106.6 109.5
C31 C32 H322 113.3 109.5
C31 C32 H321 113.3 109.5
H312 C31 H311 98.8 109.5
C33 C32 H322 113.3 109.4
C33 C32 H321 113.3 109.4
C32 C33 H333 106.6 109.5
C32 C33 H332 113.3 109.4
C32 C33 H331 113.3 109.4
H322 C32 H321 97.2 109.5
H333 C33 H332 113.2 109.5
H333 C33 H331 113.3 109.5
H332 C33 H331 97.2 109.5

Torsion Angles for TDA

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O22 C21 O21 C22 212.3 180.0
O21 C21 C22 C23 205.3 180.0
O21 C21 C22 H222 330.6 60.0
O21 C21 C22 H221 80.1 300.0
H21 O21 C21 O22 179.9 -0.0
H21 O21 C21 C22 327.7 180.0
O22 C21 O21 H21 179.9 -0.0
O21 C21 O22 C22 139.9 180.0
O22 C21 C22 C23 352.8 360.0
O22 C21 C22 H222 118.1 240.0
O22 C21 C22 H221 227.6 120.0
C22 C21 O21 H21 327.7 180.0
O21 C21 C22 O22 212.5 180.0
C23 C22 C21 H222 234.7 120.0
C23 C22 C21 H221 125.2 240.0
C21 C22 C23 C24 93.9 180.0
C21 C22 C23 H232 219.1 60.0
C21 C22 C23 H231 328.6 300.0
H222 C22 C21 H221 250.5 120.0
C21 C22 C23 H222 125.3 240.0
C21 C22 C23 H221 234.8 120.0
H222 C22 C23 H221 109.5 240.0
C24 C23 C22 H232 234.7 120.0
C24 C23 C22 H231 125.3 240.0
C22 C23 C24 C25 119.2 180.0
C22 C23 C24 H242 244.4 60.0
C22 C23 C24 H241 353.9 300.0
H232 C23 C22 H231 250.6 120.0
C21 C22 H222 C23 235.0 120.0
C21 C22 H222 H221 117.5 240.0
C23 C22 H222 H221 242.6 120.0
H222 C22 C23 C24 328.6 300.0
H222 C22 C23 H232 93.8 180.0
H222 C22 C23 H231 203.3 60.0
C21 C22 H221 C23 125.0 240.0
C21 C22 H221 H222 242.5 120.0
C23 C22 H221 H222 117.5 240.0
H221 C22 C23 C24 219.1 60.0
H221 C22 C23 H232 344.4 300.0
H221 C22 C23 H231 93.8 180.0
C24 C23 C22 H222 328.6 300.0
C24 C23 C22 H221 219.1 60.0
C22 C23 C24 H232 125.3 240.0
C22 C23 C24 H231 234.7 120.0
H232 C23 C24 H231 109.4 240.0
C25 C24 C23 H242 234.8 120.0
C25 C24 C23 H241 125.3 240.0
C23 C24 C25 C26 201.1 180.0
C23 C24 C25 H252 326.4 60.0
C23 C24 C25 H251 75.8 300.0
H242 C24 C23 H241 250.5 120.0
H232 C23 C22 H222 93.8 180.0
H232 C23 C22 H221 344.4 300.0
C22 C23 H232 C24 233.2 120.0
C22 C23 H232 H231 116.6 240.0
C24 C23 H232 H231 243.4 120.0
H232 C23 C24 C25 353.9 300.0
H232 C23 C24 H242 119.1 180.0
H232 C23 C24 H241 228.6 60.0
H231 C23 C22 H222 203.3 60.0
H231 C23 C22 H221 93.8 180.0
C22 C23 H231 C24 126.8 240.0
C22 C23 H231 H232 243.4 120.0
C24 C23 H231 H232 116.6 240.0
H231 C23 C24 C25 244.5 60.0
H231 C23 C24 H242 9.7 300.0
H231 C23 C24 H241 119.2 180.0
C25 C24 C23 H232 353.9 300.0
C25 C24 C23 H231 244.5 60.0
C23 C24 C25 H242 125.2 240.0
C23 C24 C25 H241 234.7 120.0
H242 C24 C25 H241 109.5 240.0
C26 C25 C24 H252 234.7 120.0
C26 C25 C24 H251 125.3 240.0
C24 C25 C26 C27 203.4 180.0
C24 C25 C26 H262 328.6 60.0
C24 C25 C26 H261 78.2 300.0
H252 C25 C24 H251 250.6 120.0
H242 C24 C23 H232 119.1 180.0
H242 C24 C23 H231 9.7 300.0
C23 C24 H242 C25 233.6 120.0
C23 C24 H242 H241 116.8 240.0
C25 C24 H242 H241 243.2 120.0
H242 C24 C25 C26 75.9 300.0
H242 C24 C25 H252 201.2 180.0
H242 C24 C25 H251 310.6 60.0
H241 C24 C23 H232 228.6 60.0
H241 C24 C23 H231 119.2 180.0
C23 C24 H241 C25 126.4 240.0
C23 C24 H241 H242 243.2 120.0
C25 C24 H241 H242 116.8 240.0
H241 C24 C25 C26 326.4 60.0
H241 C24 C25 H252 91.7 300.0
H241 C24 C25 H251 201.1 180.0
C26 C25 C24 H242 75.9 300.0
C26 C25 C24 H241 326.4 60.0
C24 C25 C26 H252 125.3 240.0
C24 C25 C26 H251 234.7 120.0
H252 C25 C26 H251 109.4 240.0
C27 C26 C25 H262 234.7 120.0
C27 C26 C25 H261 125.2 240.0
C25 C26 C27 C28 189.9 180.0
C25 C26 C27 H272 315.2 60.0
C25 C26 C27 H271 64.6 300.0
H262 C26 C25 H261 250.5 120.0
H252 C25 C24 H242 201.2 180.0
H252 C25 C24 H241 91.7 300.0
C24 C25 H252 C26 235.7 120.0
C24 C25 H252 H251 117.9 240.0
C26 C25 H252 H251 242.2 120.0
H252 C25 C26 C27 78.1 300.0
H252 C25 C26 H262 203.3 180.0
H252 C25 C26 H261 312.9 60.0
H251 C25 C24 H242 310.6 60.0
H251 C25 C24 H241 201.1 180.0
C24 C25 H251 C26 124.3 240.0
C24 C25 H251 H252 242.1 120.0
C26 C25 H251 H252 117.8 240.0
H251 C25 C26 C27 328.7 60.0
H251 C25 C26 H262 93.9 300.0
H251 C25 C26 H261 203.5 180.0
C27 C26 C25 H252 78.1 300.0
C27 C26 C25 H251 328.7 60.0
C25 C26 C27 H262 125.2 240.0
C25 C26 C27 H261 234.8 120.0
H262 C26 C27 H261 109.5 240.0
C28 C27 C26 H272 234.7 120.0
C28 C27 C26 H271 125.3 240.0
C26 C27 C28 C29 153.7 180.0
C26 C27 C28 H282 279.0 60.0
C26 C27 C28 H281 28.4 300.0
H272 C27 C26 H271 250.6 120.0
H262 C26 C25 H252 203.3 180.0
H262 C26 C25 H251 93.9 300.0
C25 C26 H262 C27 240.3 120.0
C25 C26 H262 H261 120.1 240.0
C27 C26 H262 H261 239.9 120.0
H262 C26 C27 C28 64.7 300.0
H262 C26 C27 H272 189.9 180.0
H262 C26 C27 H271 299.4 60.0
H261 C26 C25 H252 312.9 60.0
H261 C26 C25 H251 203.5 180.0
C25 C26 H261 C27 119.7 240.0
C25 C26 H261 H262 239.9 120.0
C27 C26 H261 H262 120.1 240.0
H261 C26 C27 C28 315.1 60.0
H261 C26 C27 H272 80.4 300.0
H261 C26 C27 H271 189.8 180.0
C28 C27 C26 H262 64.7 300.0
C28 C27 C26 H261 315.1 60.0
C26 C27 C28 H272 125.3 240.0
C26 C27 C28 H271 234.7 120.0
H272 C27 C28 H271 109.4 240.0
C29 C28 C27 H282 234.7 120.0
C29 C28 C27 H281 125.3 240.0
C27 C28 C29 C30 186.9 180.0
C27 C28 C29 H292 312.2 60.0
C27 C28 C29 H291 61.7 300.0
H282 C28 C27 H281 250.5 120.0
H272 C27 C26 H262 189.9 180.0
H272 C27 C26 H261 80.4 300.0
C26 C27 H272 C28 239.7 120.0
C26 C27 H272 H271 119.8 240.0
C28 C27 H272 H271 240.1 120.0
H272 C27 C28 C29 28.4 300.0
H272 C27 C28 H282 153.7 180.0
H272 C27 C28 H281 263.2 60.0
H271 C27 C26 H262 299.4 60.0
H271 C27 C26 H261 189.8 180.0
C26 C27 H271 C28 120.3 240.0
C26 C27 H271 H272 240.2 120.0
C28 C27 H271 H272 119.8 240.0
H271 C27 C28 C29 279.0 60.0
H271 C27 C28 H282 44.2 300.0
H271 C27 C28 H281 153.7 180.0
C29 C28 C27 H272 28.4 300.0
C29 C28 C27 H271 279.0 60.0
C27 C28 C29 H282 125.3 240.0
C27 C28 C29 H281 234.7 120.0
H282 C28 C29 H281 109.5 240.0
C30 C29 C28 H292 234.7 120.0
C30 C29 C28 H291 125.3 240.0
C28 C29 C30 C31 160.8 180.0
C28 C29 C30 H302 286.0 60.0
C28 C29 C30 H301 35.6 300.0
H292 C29 C28 H291 250.5 120.0
H282 C28 C27 H272 153.7 180.0
H282 C28 C27 H271 44.2 300.0
C27 C28 H282 C29 239.4 120.0
C27 C28 H282 H281 119.7 240.0
C29 C28 H282 H281 240.3 120.0
H282 C28 C29 C30 61.7 300.0
H282 C28 C29 H292 187.0 180.0
H282 C28 C29 H291 296.4 60.0
H281 C28 C27 H272 263.2 60.0
H281 C28 C27 H271 153.7 180.0
C27 C28 H281 C29 120.6 240.0
C27 C28 H281 H282 240.3 120.0
C29 C28 H281 H282 119.7 240.0
H281 C28 C29 C30 312.2 60.0
H281 C28 C29 H292 77.5 300.0
H281 C28 C29 H291 186.9 180.0
C30 C29 C28 H282 61.7 300.0
C30 C29 C28 H281 312.2 60.0
C28 C29 C30 H292 125.3 240.0
C28 C29 C30 H291 234.7 120.0
H292 C29 C30 H291 109.4 240.0
C31 C30 C29 H302 234.8 120.0
C31 C30 C29 H301 125.2 240.0
C29 C30 C31 C32 307.9 180.0
C29 C30 C31 H312 73.1 60.0
C29 C30 C31 H311 182.6 300.0
H302 C30 C29 H301 250.5 120.0
H292 C29 C28 H282 187.0 180.0
H292 C29 C28 H281 77.5 300.0
C28 C29 H292 C30 244.8 120.0
C28 C29 H292 H291 122.4 240.0
C30 C29 H292 H291 237.6 120.0
H292 C29 C30 C31 35.5 300.0
H292 C29 C30 H302 160.7 180.0
H292 C29 C30 H301 270.3 60.0
H291 C29 C28 H282 296.4 60.0
H291 C29 C28 H281 186.9 180.0
C28 C29 H291 C30 115.1 240.0
C28 C29 H291 H292 237.6 120.0
C30 C29 H291 H292 122.4 240.0
H291 C29 C30 C31 286.1 60.0
H291 C29 C30 H302 51.3 300.0
H291 C29 C30 H301 160.9 180.0
C31 C30 C29 H292 35.5 300.0
C31 C30 C29 H291 286.1 60.0
C29 C30 C31 H302 125.2 240.0
C29 C30 C31 H301 234.7 120.0
H302 C30 C31 H301 109.5 240.0
C32 C31 C30 H312 234.8 120.0
C32 C31 C30 H311 125.3 240.0
C30 C31 C32 C33 206.8 180.0
C30 C31 C32 H322 332.1 60.0
C30 C31 C32 H321 81.6 300.0
H312 C31 C30 H311 250.5 120.0
H302 C30 C29 H292 160.7 180.0
H302 C30 C29 H291 51.3 300.0
C29 C30 H302 C31 239.4 120.0
C29 C30 H302 H301 119.7 240.0
C31 C30 H302 H301 240.3 120.0
H302 C30 C31 C32 182.7 300.0
H302 C30 C31 H312 307.9 180.0
H302 C30 C31 H311 57.4 60.0
H301 C30 C29 H292 270.3 60.0
H301 C30 C29 H291 160.9 180.0
C29 C30 H301 C31 120.6 240.0
C29 C30 H301 H302 240.3 120.0
C31 C30 H301 H302 119.7 240.0
H301 C30 C31 C32 73.1 60.0
H301 C30 C31 H312 198.3 300.0
H301 C30 C31 H311 307.8 180.0
C32 C31 C30 H302 182.7 300.0
C32 C31 C30 H301 73.1 60.0
C30 C31 C32 H312 125.2 240.0
C30 C31 C32 H311 234.7 120.0
H312 C31 C32 H311 109.5 240.0
C33 C32 C31 H322 234.7 120.0
C33 C32 C31 H321 125.2 240.0
C31 C32 C33 H333 180.0 180.0
C31 C32 C33 H332 305.2 300.0
C31 C32 C33 H331 54.7 60.0
H322 C32 C31 H321 250.5 120.1
H312 C31 C30 H302 307.9 180.0
H312 C31 C30 H301 198.3 300.0
C30 C31 H312 C32 234.9 120.0
C30 C31 H312 H311 117.5 240.0
C32 C31 H312 H311 242.5 120.0
H312 C31 C32 C33 81.6 300.0
H312 C31 C32 H322 206.9 180.0
H312 C31 C32 H321 316.3 60.0
H311 C31 C30 H302 57.4 60.0
H311 C31 C30 H301 307.8 180.0
C30 C31 H311 C32 125.1 240.0
C30 C31 H311 H312 242.5 120.0
C32 C31 H311 H312 117.5 240.0
H311 C31 C32 C33 332.1 60.0
H311 C31 C32 H322 97.4 300.0
H311 C31 C32 H321 206.9 180.0
C33 C32 C31 H312 81.6 300.0
C33 C32 C31 H311 332.1 60.0
C31 C32 C33 H322 125.3 240.0
C31 C32 C33 H321 234.8 120.0
H322 C32 C33 H321 109.5 240.1
H333 C33 C32 H332 234.8 240.0
H333 C33 C32 H331 125.3 120.0
H332 C33 C32 H331 250.5 240.1
H322 C32 C31 H312 206.9 180.0
H322 C32 C31 H311 97.4 300.0
C31 C32 H322 C33 238.4 120.0
C31 C32 H322 H321 119.2 239.9
C33 C32 H322 H321 240.8 119.9
H322 C32 C33 H333 54.7 300.0
H322 C32 C33 H332 179.9 60.1
H322 C32 C33 H331 289.4 180.0
H321 C32 C31 H312 316.3 60.0
H321 C32 C31 H311 206.9 180.0
C31 C32 H321 C33 121.6 240.0
C31 C32 H321 H322 240.8 120.1
C33 C32 H321 H322 119.2 240.1
H321 C32 C33 H333 305.3 60.0
H321 C32 C33 H332 70.5 180.0
H321 C32 C33 H331 180.0 299.9
H333 C33 C32 H322 54.7 300.0
H333 C33 C32 H321 305.3 60.0
C32 C33 H333 H332 125.2 120.0
C32 C33 H333 H331 234.7 240.0
H332 C33 H333 H331 109.5 120.1
H332 C33 C32 H322 179.9 60.1
H332 C33 C32 H321 70.5 180.0
C32 C33 H332 H333 238.5 240.0
C32 C33 H332 H331 119.2 119.9
H333 C33 H332 H331 240.8 239.9
H331 C33 C32 H322 289.4 180.0
H331 C33 C32 H321 180.0 299.9
C32 C33 H331 H333 121.6 120.0
C32 C33 H331 H332 240.8 240.1
H333 C33 H331 H332 119.2 120.1